Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26928 Davidia involucrata HOM05D006223 ORTHO05D012503 4.4e-59 231.1 119 100.0
Dinv01305 Davidia involucrata HOM05D020227 ORTHO05D012503 2.1e-29 132.5 94 75.5
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 3.0e-15 85.5 113 50.4
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 3.3e-14 82.0 123 41.5
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.3e-13 80.1 68 55.9
Cfa004129 Carpinus fangiana HOM05D006223 ORTHO05D012503 1.8e-12 76.3 66 57.6
Gorai.008G083700 Gossypium raimondii HOM05D006223 ORTHO05D012503 1.0e-10 70.5 67 52.2
Phvul.003G235200 Phaseolus vulgaris HOM05D006223 ORTHO05D012503 1.3e-10 70.1 71 50.7
Gohir.A12G077200 Gossypium hirsutum HOM05D006223 ORTHO05D012503 1.7e-10 69.7 67 52.2
Gohir.A11G215100 Gossypium hirsutum HOM05D006223 ORTHO05D012503 3.8e-10 68.6 53 60.4
Gorai.007G223300 Gossypium raimondii HOM05D006223 ORTHO05D012503 5.0e-10 68.2 53 60.4
Cpa.g.sc6.20 Carica papaya HOM05D006223 ORTHO05D012503 1.1e-09 67.0 57 57.9
Dinv08529 Davidia involucrata HOM05D001440 ORTHO05D013218 1.4e-09 66.6 46 71.7
Potri.012G080700 Populus trichocarpa HOM05D006223 ORTHO05D012503 1.4e-09 66.6 57 52.6
RcHm_v2.0_Chr2g0107991 Rosa chinensis HOM05D006223 ORTHO05D012503 3.2e-09 65.5 67 52.2
TPR.G24236 Trifolium pratense HOM05D006223 ORTHO05D012503 3.2e-09 65.5 61 50.8
FAN28G0296 Fragaria x ananassa HOM05D006223 ORTHO05D012503 1.6e-08 63.2 59 54.2
Glyma.05G105400 Glycine max HOM05D006223 ORTHO05D012503 1.6e-08 63.2 61 54.1
Glyma.17G161000 Glycine max HOM05D006223 ORTHO05D012503 1.6e-08 63.2 61 54.1
Nn5g30587 Nelumbo nucifera HOM05D011781 ORTHO05D013854 1.8e-07 59.7 58 53.4
Lj4g0020529 Lotus japonicus HOM05D006223 ORTHO05D012503 5.1e-07 58.2 58 44.8
Nn1g04553 Nelumbo nucifera HOM05D011781 ORTHO05D013854 6.7e-07 57.8 54 55.6
Manes.10G083900 Manihot esculenta HOM05D011781 ORTHO05D013854 2.6e-06 55.8 55 50.9
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 3.3e-06 55.5 94 37.2
Potri.001G293200 Populus trichocarpa HOM05D011781 ORTHO05D013854 3.3e-06 55.5 52 48.1


User provided reference genes

Program Settings