Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26898 Davidia involucrata HOM05D006669 ORTHO05D008440 5.4e-89 330.9 156 100.0
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 2.2e-13 79.7 52 69.2
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 3.7e-13 79.0 52 67.3
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 4.8e-13 78.6 52 69.2
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 6.3e-13 78.2 52 67.3
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 6.3e-13 78.2 52 67.3
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 8.2e-13 77.8 52 65.4
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 8.2e-13 77.8 52 65.4
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 1.4e-12 77.0 52 65.4
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 1.4e-12 77.0 52 65.4
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 1.8e-12 76.6 52 65.4
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 1.8e-12 76.6 52 63.5
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 1.8e-12 76.6 52 65.4
Hma1.2p1_1506F.1_g287550 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 3.1e-12 75.9 52 67.3
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 4.1e-12 75.5 52 65.4
Manes.01G047215 Manihot esculenta HOM05D006669 ORTHO05D008440 4.1e-12 75.5 52 65.4
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 9.1e-12 74.3 52 61.5
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 9.1e-12 74.3 52 61.5
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 1.2e-11 73.9 57 57.9
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 1.6e-11 73.6 52 63.5
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 2.0e-11 73.2 52 61.5
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 2.6e-11 72.8 52 63.5
QL06p039919 Quercus lobata HOM05D006669 ORTHO05D008440 2.6e-11 72.8 52 63.5
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 3.5e-11 72.4 52 61.5
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 3.5e-11 72.4 52 61.5
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 4.5e-11 72.0 60 50.0
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 4.5e-11 72.0 52 63.5
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 5.9e-11 71.6 52 65.4
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 5.9e-11 71.6 52 59.6
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 5.9e-11 71.6 52 59.6
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 7.7e-11 71.2 52 63.5
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 1.0e-10 70.9 57 52.6
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 1.3e-10 70.5 52 55.8
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 2.2e-10 69.7 57 54.4
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 2.2e-10 69.7 52 59.6
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 2.2e-10 69.7 52 61.5
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 2.2e-10 69.7 52 59.6
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 2.2e-10 69.7 52 61.5
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 3.8e-10 68.9 52 57.7
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 3.8e-10 68.9 52 59.6
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 5.0e-10 68.6 52 55.8
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 5.0e-10 68.6 52 55.8
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 5.0e-10 68.6 52 57.7
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 6.5e-10 68.2 44 63.6
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 6.5e-10 68.2 81 44.4
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 6.5e-10 68.2 52 59.6
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 8.5e-10 67.8 52 55.8
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 8.5e-10 67.8 52 55.8
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 1.5e-09 67.0 52 55.8
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 1.9e-09 66.6 52 59.6
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 2.5e-09 66.2 52 55.8
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 3.2e-09 65.9 52 53.8
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 4.2e-09 65.5 52 55.8
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 5.5e-09 65.1 57 50.9
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 5.5e-09 65.1 52 57.7
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 5.5e-09 65.1 52 57.7
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 1.2e-08 63.9 57 52.6
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 1.2e-08 63.9 52 53.8
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 1.2e-08 63.9 52 53.8
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 1.6e-08 63.5 52 53.8
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 1.6e-08 63.5 44 61.4
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 2.1e-08 63.2 44 63.6
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 1.0e-07 60.8 52 50.0
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 1.2e-06 57.4 44 59.1
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 2.0e-06 56.6 55 50.9
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 2.0e-06 56.6 52 46.2
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 3.3e-06 55.8 52 46.2
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 3.3e-06 55.8 52 46.2
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 3.3e-06 55.8 52 48.1
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 3.3e-06 55.8 52 46.2
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 4.4e-06 55.5 52 46.2
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 7.5e-06 54.7 52 46.2
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 7.5e-06 54.7 52 46.2
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 7.5e-06 54.7 52 46.2
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 7.5e-06 54.7 52 46.2
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 7.5e-06 54.7 52 46.2
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 7.5e-06 54.7 52 46.2
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 9.7e-06 54.3 52 44.2


User provided reference genes

Program Settings