Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26880 Davidia involucrata HOM05D004233 ORTHO05D003507 8.8e-72 273.5 135 100.0
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 3.1e-16 89.0 126 45.2
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 2.2e-14 82.8 78 57.7
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 3.2e-13 79.0 79 58.2
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 5.5e-13 78.2 77 55.8
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 2.1e-12 76.3 72 56.9
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.3e-11 73.6 68 57.4
Potri.001G249500 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.3e-11 73.6 77 59.7
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 1.8e-11 73.2 70 58.6
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 1.8e-11 73.2 64 60.9
Gorai.001G115000 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.8e-11 73.2 81 53.1
TWI79G1354 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 1.8e-11 73.2 92 50.0
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 1.5e-10 70.1 72 58.3
Gohir.A07G102900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.5e-10 70.1 68 55.9
CiPaw.14G060900 Carya illinoinensis HOM05D004233 ORTHO05D003507 4.3e-10 68.6 78 51.3
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 5.6e-10 68.2 65 56.9
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 9.6e-10 67.4 46 69.6
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 2.1e-09 66.2 66 56.1
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 2.8e-09 65.9 67 53.7
Oeu045519.1 Olea europaea HOM05D004233 ORTHO05D003507 2.8e-09 65.9 76 53.9
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 2.8e-09 65.9 65 53.8
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 8.2e-09 64.3 62 58.1
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 1.4e-08 63.5 71 53.5
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 1.4e-08 63.5 67 53.7
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.8e-08 63.2 67 53.7
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.8e-08 63.2 67 53.7
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 2.4e-08 62.8 67 52.2
Gohir.A04G088850 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.4e-08 62.8 78 46.2
Potri.009G043501 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.4e-08 62.8 66 59.1
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 3.1e-08 62.4 67 52.2
Gohir.A03G049600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.1e-08 62.4 72 54.2
Gohir.D03G117700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.1e-08 62.4 72 54.2
Gorai.003G124100 Gossypium raimondii HOM05D004233 ORTHO05D003507 3.1e-08 62.4 72 54.2
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 3.1e-08 62.4 68 57.4
Sabra09G0030900 Salix brachista HOM05D004233 ORTHO05D003507 3.1e-08 62.4 46 65.2
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.0e-08 62.0 67 52.2
Gohir.D04G129214 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.0e-08 62.0 78 46.2
Gorai.012G112300 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.0e-08 62.0 78 46.2
CANSAT54G0898 Cannabis sativa HOM05D004233 ORTHO05D003507 5.3e-08 61.6 87 43.7
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 5.3e-08 61.6 63 54.0
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 6.9e-08 61.2 66 54.5
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 6.9e-08 61.2 66 54.5
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 6.9e-08 61.2 66 54.5
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 6.9e-08 61.2 97 42.3
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 6.9e-08 61.2 63 54.0
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 9.0e-08 60.8 70 50.0
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 1.2e-07 60.5 70 48.6
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 1.2e-07 60.5 61 55.7
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 1.5e-07 60.1 87 44.8
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 2.0e-07 59.7 67 53.7
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 2.0e-07 59.7 67 53.7
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 2.0e-07 59.7 67 50.7
Prupe.6G060400 Prunus persica HOM05D012510 ORTHO05D015115 2.0e-07 59.7 78 44.9
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 2.6e-07 59.3 65 50.8
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 2.6e-07 59.3 62 54.8
C05p05370 Brassica napus HOM05D005325 ORTHO05D003507 7.6e-07 57.8 83 48.2
MBI05_g30571_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 7.6e-07 57.8 63 47.6
Thhalv10009101m.g Eutrema salsugineum HOM05D005325 ORTHO05D003507 1.0e-06 57.4 85 47.1
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.0e-06 57.4 67 52.2
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.3e-06 57.0 64 56.2
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 1.3e-06 57.0 66 48.5
MBI06_g42853_MAGBIO Magnolia biondii HOM05D004233 ORTHO05D003507 1.7e-06 56.6 64 46.9
DCAR_018722 Daucus carota HOM05D004233 ORTHO05D003507 2.2e-06 56.2 69 49.3
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 3.8e-06 55.5 63 52.4
Lsat_1_v5_gn_9_20140 Lactuca sativa HOM05D004233 ORTHO05D003507 3.8e-06 55.5 60 51.7
SalBow4G0303 Salvia bowleyana HOM05D004233 ORTHO05D003507 3.8e-06 55.5 69 47.8
Nitab4.5_0000102g0150 Nicotiana tabacum HOM05D004233 ORTHO05D003507 4.9e-06 55.1 84 44.0
A10p05870 Brassica napus HOM05D005325 ORTHO05D003507 6.5e-06 54.7 82 46.3
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 6.5e-06 54.7 86 45.3
BraA10t42849Z Brassica rapa HOM05D005325 ORTHO05D003507 8.4e-06 54.3 83 45.8
FvH4_6g11920 Fragaria vesca HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 48.5
FAN02G0664 Fragaria x ananassa HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 48.5
FAN05G3657 Fragaria x ananassa HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 48.5
FAN14G3430 Fragaria x ananassa HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 48.5
FAN14G4547 Fragaria x ananassa HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 48.5
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 43.9
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 8.4e-06 54.3 66 47.0
RcHm_v2.0_Chr3g0463681 Rosa chinensis HOM05D004233 ORTHO05D003507 8.4e-06 54.3 61 45.9


User provided reference genes

Program Settings