Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 1.1e-180 637.1 474 100.0
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.2e-123 447.6 475 77.7
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 4.3e-121 439.1 475 78.9
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 2.1e-120 436.8 486 65.4
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 4.4e-118 429.1 476 76.7
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 5.8e-118 428.7 475 76.4
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 3.5e-107 392.9 489 60.1
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 6.0e-107 392.1 489 60.3
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 1.2e-104 384.4 475 56.6
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 1.1e-103 381.3 472 72.5
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 1.4e-103 380.9 475 71.8
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 5.8e-102 375.6 473 71.2
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 9.9e-102 374.8 477 74.2
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 2.2e-101 373.6 476 71.2
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 1.1e-100 371.3 472 70.1
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 2.1e-99 367.1 476 70.6
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 7.8e-99 365.2 474 72.2
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 1.1e-97 361.3 474 60.8
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 1.3e-96 357.8 475 68.4
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 4.8e-96 355.9 471 66.7
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 5.3e-95 352.4 474 66.5
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 9.9e-94 348.2 476 68.9
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 1.3e-93 347.8 475 68.4
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 2.9e-93 346.7 475 66.5
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 3.8e-93 346.3 467 70.0
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 8.4e-93 345.1 475 68.6
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 1.4e-92 344.4 474 67.7
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 2.7e-91 340.1 471 69.6
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 4.6e-91 339.3 472 66.3
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 6.7e-90 335.5 471 68.4
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 8.7e-90 335.1 472 67.6
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 4.8e-88 329.3 467 67.9
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 6.9e-87 325.5 472 64.6
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 9.0e-87 325.1 474 63.3
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 2.0e-86 323.9 475 67.2
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 3.4e-86 323.2 471 63.9
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 3.4e-86 323.2 470 65.7
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 4.5e-86 322.8 475 66.5
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 1.3e-85 321.2 469 67.8
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 3.8e-85 319.7 468 66.5
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 4.9e-85 319.3 479 55.3
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 8.4e-85 318.5 473 56.4
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 1.1e-84 318.2 510 48.2
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 1.4e-84 317.8 472 64.6
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 4.2e-84 316.2 474 55.9
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 5.5e-84 315.8 474 66.2
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 2.7e-83 313.5 474 63.9
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 4.6e-83 312.8 487 54.0
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 1.8e-82 310.8 472 66.3
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 2.3e-82 310.5 469 64.6
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 3.9e-82 309.7 474 53.6
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 1.5e-81 307.8 424 70.8
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 2.5e-81 307.0 472 65.5
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 1.4e-79 301.2 470 61.7
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 6.5e-77 292.4 463 64.6
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 2.5e-76 290.4 472 62.5
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 3.2e-76 290.0 477 62.9
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 4.2e-76 289.7 470 61.1
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 2.7e-75 287.0 276 52.9
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 6.0e-75 285.8 471 61.4
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 3.0e-74 283.5 470 60.9
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 8.7e-74 282.0 502 61.2
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 3.3e-73 280.0 473 61.1
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 7.4e-73 278.9 470 59.4
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 7.4e-73 278.9 469 60.1
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 9.7e-73 278.5 472 59.3
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 6.9e-71 272.3 473 58.8
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 6.9e-71 272.3 473 58.8
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 9.0e-71 271.9 471 59.4
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 3.4e-70 270.0 474 57.8
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 5.9e-70 269.2 471 59.7
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 5.9e-70 269.2 284 50.7
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 1.0e-69 268.5 474 58.2
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 1.0e-69 268.5 474 58.2
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 1.3e-69 268.1 471 58.2
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 1.7e-69 267.7 470 58.3
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 5.5e-68 262.7 470 61.7
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.2e-67 261.5 475 63.4
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 4.6e-67 259.6 259 54.1
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 1.4e-63 248.1 468 61.3
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 7.7e-62 242.3 295 45.8
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 6.7e-58 229.2 285 44.9
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 1.1e-57 228.4 229 52.8
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 1.5e-57 228.0 416 38.2
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 2.0e-57 227.6 285 44.6
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 5.5e-52 209.5 283 41.0
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 4.7e-51 206.5 282 46.5
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 6.7e-50 202.6 281 39.1
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 2.3e-42 177.6 226 45.1
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 9.7e-41 172.2 179 46.4
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 1.6e-35 154.8 308 73.1
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 4.4e-33 146.7 167 47.9
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 3.5e-22 110.5 94 57.4
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.6e-19 101.7 96 58.3
CDE07G1297 Ceratophyllum demersum HOM05D007242 ORTHO05D009089 4.7e-19 100.1 224 86.6
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 8.9e-18 95.9 88 52.3
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 5.8e-17 93.2 135 36.3
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 2.9e-16 90.9 107 41.1
COL.COLO4_22144 Corchorus olitorius HOM05D007242 ORTHO05D009089 8.3e-16 89.4 50 78.0
BcaC06g34191 Brassica carinata HOM05D007242 ORTHO05D009089 9.2e-15 85.9 116 38.8
CARHR143890 Cardamine hirsuta HOM05D007242 ORTHO05D009089 1.3e-13 82.0 50 74.0
Glyma.08G053867 Glycine max HOM05D007242 ORTHO05D009089 3.6e-11 73.9 40 80.0
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 8.0e-11 72.8 54 64.8
AUR62014131 Chenopodium quinoa HOM05D000424 ORTHO05D000355 2.1e-06 58.2 180 25.0


User provided reference genes

Program Settings