Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 2.8e-89 332.0 180 100.0
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.3e-62 243.4 181 77.3
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 2.7e-60 235.7 175 74.3
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 4.8e-57 224.9 180 72.2
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 8.2e-57 224.2 180 71.1
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 5.3e-56 221.5 182 71.4
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.1e-53 213.8 183 70.5
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 1.4e-53 213.4 180 68.3
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.4e-53 213.4 180 70.0
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.9e-53 213.0 183 68.3
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 2.5e-53 212.6 179 69.8
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 5.5e-53 211.5 183 67.2
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 5.5e-53 211.5 173 70.5
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 1.2e-52 210.3 176 67.6
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 2.7e-52 209.1 176 67.0
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 6.1e-52 208.0 178 68.0
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 1.8e-51 206.5 178 69.1
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 2.0e-50 203.0 178 68.5
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 2.6e-50 202.6 176 66.5
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 3.3e-50 202.2 177 64.4
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 9.7e-50 200.7 181 68.0
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 1.7e-49 199.9 180 63.3
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 2.8e-49 199.1 178 63.5
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 6.3e-49 198.0 180 63.9
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 8.2e-49 197.6 176 68.8
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 8.2e-49 197.6 178 64.6
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 3.1e-48 195.7 178 63.5
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 5.3e-48 194.9 177 66.1
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.2e-47 193.7 181 61.3
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 2.6e-47 192.6 180 61.7
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 3.5e-47 192.2 176 63.1
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 4.5e-47 191.8 175 61.7
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 2.2e-46 189.5 183 63.9
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 6.5e-46 188.0 181 63.0
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 1.1e-45 187.2 181 59.7
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 1.5e-45 186.8 181 60.2
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 1.9e-45 186.4 180 59.4
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 1.9e-45 186.4 181 60.2
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 3.2e-45 185.7 181 60.2
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 3.2e-45 185.7 180 63.9
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 3.2e-45 185.7 180 63.9
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 4.2e-45 185.3 276 47.8
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 9.4e-45 184.1 175 59.4
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 1.2e-44 183.7 183 60.7
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 1.6e-44 183.3 175 58.9
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 4.7e-44 181.8 184 63.6
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.4e-43 180.3 187 59.9
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 4.0e-43 178.7 180 58.9
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 2.6e-42 176.0 190 58.4
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 4.4e-42 175.3 188 59.0
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.3e-41 173.7 248 46.8
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.3e-41 173.7 181 61.3
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 1.7e-41 173.3 181 58.0
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 1.7e-41 173.3 181 61.3
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 3.7e-41 172.2 180 58.3
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.4e-40 170.2 178 58.4
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 3.1e-40 169.1 176 61.4
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 5.3e-40 168.3 142 69.7
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 5.3e-40 168.3 183 60.7
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 7.0e-40 167.9 180 58.9
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 7.0e-40 167.9 182 54.9
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.2e-39 167.2 181 58.6
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 1.2e-39 167.2 189 55.0
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.6e-39 166.8 174 56.3
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 2.7e-39 166.0 178 57.9
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 5.9e-39 164.9 137 67.2
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 5.9e-39 164.9 178 60.1
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.2e-38 162.9 185 56.2
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.2e-38 162.9 181 57.5
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 8.5e-38 161.0 98 90.8
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 1.2e-36 157.1 180 56.7
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.2e-34 150.6 176 56.2
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.4e-34 149.1 175 53.7
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 4.8e-33 145.2 232 46.1
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 8.3e-33 144.4 141 60.3
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 3.5e-31 139.0 201 47.3
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 5.9e-31 138.3 175 48.0
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 2.3e-30 136.3 183 49.2
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 6.5e-30 134.8 220 43.2
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 1.1e-29 134.0 180 49.4
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 3.2e-29 132.5 175 48.0
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 9.5e-29 131.0 161 51.6
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.2e-28 130.6 181 47.5
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 1.2e-28 130.6 179 49.2
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 2.1e-28 129.8 127 62.2
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 2.8e-28 129.4 184 46.7
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 6.1e-28 128.3 185 45.9
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 8.0e-28 127.9 182 47.8
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 4.0e-27 125.6 179 46.9
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 5.2e-27 125.2 147 53.7
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 6.8e-27 124.8 183 47.0
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 2.0e-26 123.2 182 48.4
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 4.4e-26 122.1 170 47.1
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 5.7e-26 121.7 179 45.8
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.7e-26 121.7 176 48.3
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 2.8e-25 119.4 168 43.5
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 2.8e-25 119.4 180 44.4
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 3.7e-25 119.0 181 45.9
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 3.7e-25 119.0 181 45.9
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 2.4e-24 116.3 170 45.9
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 2.4e-24 116.3 170 45.9
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.0e-23 113.2 144 55.6
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.0e-23 113.2 144 55.6
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.7e-23 112.8 98 66.3
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 3.5e-23 112.5 98 65.3
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 1.2e-20 104.0 173 44.5
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 3.0e-19 99.4 80 66.2
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 2.9e-17 92.8 173 41.6
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 1.4e-16 90.5 178 42.7
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.2e-15 87.4 71 64.8
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 2.3e-14 83.2 184 36.4
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.3e-13 79.3 154 39.6
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 1.6e-12 77.0 127 45.7
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 8.9e-11 71.2 84 50.0
ATR0800G094 Amborella trichopoda HOM05D006676 ORTHO05D008394 2.0e-07 60.1 124 37.9
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 3.5e-07 59.3 56 51.8


User provided reference genes

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