Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 0.0e+00 1587.0 787 100.0
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 7.1e-222 774.6 698 59.6
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 3.9e-212 742.3 599 64.3
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.9e-211 740.0 695 58.3
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.4e-198 697.2 690 54.2
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 8.2e-194 681.4 726 51.8
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 7.7e-192 674.9 697 51.2
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 1.4e-188 664.1 628 57.8
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.2e-179 634.4 684 51.2
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 4.4e-179 632.5 685 50.5
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 1.6e-176 624.0 686 50.3
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 1.3e-175 620.9 677 51.0
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.0e-173 611.7 684 49.1
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 2.3e-172 610.1 713 48.8
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 4.0e-172 609.4 676 50.0
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 5.2e-172 609.0 694 48.0
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 5.2e-172 609.0 680 51.2
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 7.5e-171 605.1 557 58.2
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 7.0e-169 598.6 684 48.7
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 5.9e-168 595.5 687 49.1
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.5e-167 592.0 673 49.5
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.5e-166 590.1 673 48.7
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.2e-166 589.3 714 46.9
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 6.8e-164 582.0 701 48.1
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 1.2e-163 581.3 686 47.8
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 1.7e-159 567.4 685 47.6
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 5.0e-159 565.8 681 47.9
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 5.0e-159 565.8 610 49.8
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 1.6e-157 560.8 679 48.3
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 4.0e-156 556.2 679 48.2
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 4.4e-155 552.7 679 47.9
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 1.1e-153 548.1 686 46.9
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 4.3e-150 536.2 681 45.2
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 1.6e-149 534.3 693 45.2
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 3.6e-149 533.1 687 45.0
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.6e-149 533.1 682 45.6
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 2.3e-148 530.4 686 44.8
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 5.2e-148 529.3 656 47.3
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 6.4e-146 522.3 687 45.0
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 5.4e-145 519.2 563 53.3
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 2.7e-144 516.9 690 43.3
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 6.0e-144 515.8 687 43.4
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 1.5e-139 501.1 701 43.7
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 5.8e-139 499.2 673 43.4
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 4.9e-138 496.1 693 42.4
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 6.4e-138 495.7 691 42.8
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 9.2e-137 491.9 682 43.1
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 1.2e-136 491.5 679 42.1
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 2.7e-136 490.3 680 44.0
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 3.5e-136 490.0 687 41.3
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 3.9e-135 486.5 688 41.7
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 2.5e-134 483.8 685 42.8
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 7.3e-134 482.3 681 41.3
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 8.1e-133 478.8 569 46.7
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 3.1e-132 476.9 591 46.2
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 1.3e-130 471.5 686 42.6
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 1.3e-130 471.5 649 44.1
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 1.4e-129 468.0 687 41.8
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 7.1e-129 465.7 537 49.0
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 4.6e-128 463.0 714 41.7
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 1.7e-127 461.1 696 39.5
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 3.0e-127 460.3 671 43.5
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 8.7e-127 458.8 695 40.7
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 1.9e-126 457.6 686 41.1
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 4.7e-125 453.0 692 40.9
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 6.2e-125 452.6 689 41.9
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 3.9e-119 433.3 653 41.3
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 6.6e-119 432.6 718 38.6
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 6.6e-119 432.6 702 39.7
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 5.6e-118 429.5 701 39.5
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 4.8e-117 426.4 681 39.9
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 5.3e-116 422.9 680 39.6
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 1.5e-115 421.4 666 40.4
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 2.2e-114 417.5 670 39.3
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 1.9e-113 414.5 655 39.2
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 2.7e-112 410.6 686 38.9
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 4.6e-112 409.8 672 39.4
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 1.3e-109 401.7 584 42.6
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 8.1e-109 399.1 661 39.6
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 9.0e-108 395.6 675 38.5
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 2.0e-107 394.4 740 37.4
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 4.5e-107 393.3 708 37.3
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.2e-104 385.2 595 38.8
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 3.0e-103 380.6 609 39.9
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 4.8e-101 373.2 363 53.2
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 5.8e-99 366.3 708 34.5
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 4.8e-93 346.7 417 46.8
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 9.0e-92 342.4 561 38.9
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 2.2e-90 337.8 506 39.5
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 5.5e-89 333.2 398 46.2
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 7.2e-89 332.8 323 56.7
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 8.8e-87 325.9 687 35.1
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 5.7e-86 323.2 669 35.0
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 9.7e-86 322.4 683 33.8
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 2.2e-85 321.2 683 33.7
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 3.3e-78 297.4 687 32.8
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 2.2e-77 294.7 402 43.8
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 3.7e-69 267.3 397 41.8
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 2.6e-67 261.2 398 41.7
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 1.7e-61 241.9 317 44.5
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.6e-50 203.4 195 55.4
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 4.0e-39 167.5 369 33.3
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.2e-32 146.0 183 49.7
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 1.5e-30 139.0 110 62.7
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 4.3e-25 120.9 556 24.6
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.2e-24 119.4 137 48.2
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 7.6e-22 110.2 97 56.7
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 6.0e-19 100.5 443 27.8
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.7e-18 99.0 230 31.7
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.0e-18 98.2 92 55.4
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.0e-18 98.2 92 55.4
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 4.0e-15 87.8 660 23.6
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 3.4e-14 84.7 396 25.3
SGA_v2.0_scaffold204G41612 Striga asiatica HOM05D006685 ORTHO05D008244 3.8e-13 81.3 71 60.6
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.6e-11 75.9 59 59.3
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 4.8e-08 64.3 383 21.9
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 8.1e-08 63.5 73 45.2
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 4.0e-07 61.2 244 26.6
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.6e-06 58.5 57 52.6
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 3.4e-06 58.2 138 29.0


User provided reference genes

Program Settings