Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 5.6e-172 607.4 291 100.0
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 6.4e-35 152.1 154 52.6
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.4e-35 151.8 174 48.3
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 7.1e-34 148.7 164 50.0
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.2e-33 147.9 165 47.3
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.6e-33 147.5 180 48.3
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 3.5e-33 146.4 196 48.5
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.5e-33 146.4 162 48.8
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 4.6e-33 146.0 177 49.2
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 6.0e-33 145.6 158 50.6
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.0e-32 144.8 160 49.4
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 6.6e-32 142.1 160 50.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.5e-31 140.2 166 48.2
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 3.3e-31 139.8 164 47.6
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.6e-31 139.0 155 52.9
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 7.3e-31 138.7 178 47.2
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.8e-29 134.0 133 56.4
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.8e-29 134.0 149 51.7
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 3.1e-29 133.3 167 43.7
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 9.0e-29 131.7 180 44.4
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.6e-28 130.2 164 47.0
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.8e-28 129.0 168 46.4
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.9e-27 126.7 169 45.0
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.9e-27 126.7 171 44.4
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.9e-27 125.9 171 44.4
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 8.4e-27 125.2 153 47.7
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.1e-26 124.8 184 42.9
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 1.4e-26 124.4 153 48.4
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 2.4e-26 123.6 157 45.9
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.2e-26 123.2 147 50.3
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 7.1e-26 122.1 160 42.5
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 7.1e-26 122.1 175 42.9
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 7.1e-26 122.1 175 42.9
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.1e-25 120.6 175 41.7
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.7e-25 120.2 160 46.2
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 2.7e-25 120.2 174 45.4
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 6.0e-25 119.0 160 43.8
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 6.0e-25 119.0 160 43.8
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 6.0e-25 119.0 160 46.2
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.0e-25 119.0 160 46.2
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 7.8e-25 118.6 160 46.2
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 7.8e-25 118.6 174 40.8
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.3e-24 117.9 190 40.5
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.0e-24 116.7 168 44.0
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 3.9e-24 116.3 133 47.4
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 5.1e-24 115.9 170 44.7
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 8.7e-24 115.2 183 44.3
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.1e-23 114.8 160 46.9
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.1e-23 114.8 175 41.1
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.3e-23 112.8 144 45.8
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 5.6e-23 112.5 147 44.9
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 7.3e-23 112.1 129 49.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 9.6e-23 111.7 170 41.8
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.1e-22 110.5 147 44.2
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 4.8e-22 109.4 179 40.2
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.8e-22 109.4 159 42.1
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 4.8e-22 109.4 167 43.7
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 4.8e-22 109.4 166 41.0
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 6.2e-22 109.0 144 43.8
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.4e-21 107.8 195 36.4
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 1.4e-21 107.8 172 41.9
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 6.9e-21 105.5 181 40.9
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 6.9e-21 105.5 172 41.3
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 6.9e-21 105.5 181 37.6
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.2e-20 104.8 144 43.1
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.0e-20 104.0 168 39.3
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 5.8e-20 102.4 163 39.3
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.8e-20 102.4 162 39.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 7.6e-20 102.1 192 38.5
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 9.9e-20 101.7 141 41.1
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 4.9e-19 99.4 130 42.3
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 6.4e-19 99.0 145 41.4
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.9e-18 97.4 238 34.0
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 1.9e-18 97.4 177 36.7
Dinv12868 Davidia involucrata HOM05D000021 ORTHO05D000010 2.4e-18 97.1 81 64.2
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 3.2e-18 96.7 145 40.0
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 5.4e-18 95.9 148 36.5
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 9.3e-18 95.1 143 39.2
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 9.3e-18 95.1 149 39.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.2e-17 94.7 171 37.4
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.1e-17 94.0 168 39.3
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 4.6e-17 92.8 129 42.6
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.3e-16 91.3 127 47.2
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.8e-16 90.9 136 39.0
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.8e-16 90.9 159 36.5
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 8.7e-16 88.6 132 43.2
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 8.7e-16 88.6 132 43.2
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 1.1e-15 88.2 123 42.3
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.9e-15 87.4 199 32.2
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.5e-15 87.0 161 39.1
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 4.3e-15 86.3 130 41.5
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 5.6e-15 85.9 198 32.3
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 4.8e-14 82.8 160 37.5
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.2e-12 78.2 144 35.4
MBI03_g11135_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 1.5e-12 77.8 122 45.9
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 3.4e-12 76.6 178 34.8
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 1.3e-11 74.7 96 43.8
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 1.7e-11 74.3 154 36.4
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.8e-11 73.2 177 33.3
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.8e-11 73.2 177 33.3
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 2.5e-10 70.5 224 29.5
Lj7P307T15 Lonicera japonica HOM05D007182 ORTHO05D008919 5.5e-10 69.3 115 42.6
MBI06_g01043_MAGBIO Magnolia biondii HOM05D007182 ORTHO05D008919 7.1e-10 68.9 126 43.7
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.2e-09 68.2 132 36.4
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.2e-09 68.2 113 40.7
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.1e-09 67.4 138 35.5
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 2.1e-09 67.4 212 32.1
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 6.0e-09 65.9 179 33.0
HanXRQChr02g0037031 Helianthus annuus HOM05D007182 ORTHO05D008919 1.6e-06 57.8 175 30.9


User provided reference genes

Program Settings