Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26718 Davidia involucrata HOM05D002733 ORTHO05D003856 9.5e-56 219.9 110 100.0
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 8.9e-46 186.8 104 90.4
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 1.1e-38 163.3 109 79.8
Dinv07991 Davidia involucrata HOM05D002733 ORTHO05D003856 3.3e-16 88.6 50 88.0
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 5.2e-14 81.3 91 54.9
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.2e-14 81.3 91 54.9
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 6.9e-14 80.9 91 54.9
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 6.9e-14 80.9 92 54.3
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 9.0e-14 80.5 109 45.9
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 9.0e-14 80.5 92 51.1
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 9.0e-14 80.5 92 51.1
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 3.4e-13 78.6 108 44.4
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.4e-13 78.6 92 51.1
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.4e-13 78.2 91 53.8
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 4.4e-13 78.2 91 53.8
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 4.4e-13 78.2 102 48.0
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 5.8e-13 77.8 92 48.9
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 7.6e-13 77.4 87 50.6
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 7.6e-13 77.4 92 48.9
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 9.9e-13 77.0 87 50.6
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 1.3e-12 76.6 94 48.9
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 3.8e-12 75.1 97 46.4
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.9e-12 74.7 91 49.5
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.4e-11 73.2 99 49.5
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 1.4e-11 73.2 110 44.5
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.4e-11 73.2 102 47.1
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 1.9e-11 72.8 94 47.9
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 2.4e-11 72.4 91 47.3
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 4.2e-11 71.6 96 42.7
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 5.4e-11 71.2 79 50.6
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.4e-11 71.2 76 55.3
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 5.4e-11 71.2 102 46.1
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.1e-11 70.9 91 47.3
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 9.3e-11 70.5 99 40.4
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 9.3e-11 70.5 99 40.4
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 9.3e-11 70.5 86 48.8
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.2e-10 70.1 81 48.1
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 1.2e-10 70.1 86 46.5
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 1.6e-10 69.7 96 44.8
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 2.1e-10 69.3 93 43.0
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 2.1e-10 69.3 84 46.4
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 2.1e-10 69.3 89 44.9
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 2.7e-10 68.9 98 40.8
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 2.7e-10 68.9 88 48.9
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 2.7e-10 68.9 88 48.9
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 3.5e-10 68.6 94 42.6
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 7.8e-10 67.4 80 48.8
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 1.0e-09 67.0 102 46.1
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.0e-09 67.0 103 41.7
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 1.7e-09 66.2 102 43.1
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 3.0e-09 65.5 102 43.1
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 3.9e-09 65.1 80 47.5
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 5.1e-09 64.7 88 47.7
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 5.1e-09 64.7 80 47.5
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 5.1e-09 64.7 80 46.2
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 6.6e-09 64.3 78 46.2
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 6.6e-09 64.3 95 43.2
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 6.6e-09 64.3 95 43.2
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.1e-08 63.5 90 45.6
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 1.1e-08 63.5 103 42.7
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.5e-08 63.2 82 45.1
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.9e-08 62.8 92 44.6
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.9e-08 62.8 81 46.9
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 2.5e-08 62.4 107 36.4
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 2.5e-08 62.4 90 46.7
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 2.5e-08 62.4 81 44.4
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 3.3e-08 62.0 92 45.7
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 3.3e-08 62.0 107 36.4
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 3.3e-08 62.0 107 36.4
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 4.3e-08 61.6 95 42.1
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 4.3e-08 61.6 107 35.5
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 4.3e-08 61.6 90 44.4
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 5.6e-08 61.2 88 39.8
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 7.3e-08 60.8 85 41.2
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 7.3e-08 60.8 85 41.2
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 7.3e-08 60.8 107 35.5
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.3e-07 60.1 85 40.0
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.8e-07 58.9 80 42.5
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.8e-07 58.9 81 46.9
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 3.6e-07 58.5 88 39.8
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 4.8e-07 58.2 88 39.8
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 4.8e-07 58.2 88 42.0
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 6.2e-07 57.8 85 40.0
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 6.2e-07 57.8 85 40.0
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 6.2e-07 57.8 81 39.5
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 8.1e-07 57.4 81 40.7
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.4e-06 56.6 89 44.9
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 1.8e-06 56.2 108 35.2
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 1.8e-06 56.2 71 43.7
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 2.4e-06 55.8 93 35.5
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 2.4e-06 55.8 101 33.7
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 3.1e-06 55.5 76 46.1
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 4.0e-06 55.1 84 41.7
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 5.3e-06 54.7 109 34.9
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 5.3e-06 54.7 70 45.7
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 6.9e-06 54.3 93 36.6
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 6.9e-06 54.3 70 44.3
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 9.0e-06 53.9 105 34.3
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 9.0e-06 53.9 70 45.7


User provided reference genes

Program Settings