Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26642 Davidia involucrata HOM05D006368 ORTHO05D015099 3.6e-97 358.2 177 100.0
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-15 87.0 94 48.9
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-15 86.3 109 45.9
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-15 86.3 109 45.9
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.8e-15 85.1 94 47.9
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-13 79.7 132 39.4
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 5.5e-13 78.6 103 41.7
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 7.2e-13 78.2 124 37.9
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 4.6e-12 75.5 133 36.8
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 6.1e-12 75.1 81 53.1
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-12 74.7 117 40.2
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 7.9e-12 74.7 117 42.7
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 6.7e-11 71.6 100 40.0
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-11 71.2 122 36.9
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-11 71.2 78 48.7
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-10 70.1 73 46.6
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-10 69.3 78 50.0
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 4.3e-10 68.9 72 45.8
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-10 68.9 72 45.8
TAR622G1311 Trochodendron aralioides HOM05D011176 ORTHO05D015099 5.7e-10 68.6 75 48.0
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 7.4e-10 68.2 92 40.2
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 7.4e-10 68.2 97 40.2
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 9.7e-10 67.8 113 38.9
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 6.3e-09 65.1 80 47.5
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 8.2e-09 64.7 90 37.8
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 8.2e-09 64.7 123 39.0
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.2e-09 64.7 103 39.8
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 8.2e-09 64.7 94 43.6
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 1.8e-08 63.5 119 35.3
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-08 63.5 119 35.3
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-08 63.2 101 39.6
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 3.1e-08 62.8 96 38.5
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-08 62.8 123 38.2
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-08 62.8 120 36.7
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 4.1e-08 62.4 72 44.4
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 4.1e-08 62.4 120 36.7
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.1e-08 62.4 167 29.9
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 5.3e-08 62.0 103 36.9
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.3e-08 62.0 103 36.9
unitig_0.g2609 Utricularia gibba HOM05D011176 ORTHO05D015099 5.3e-08 62.0 59 55.9
Os06g0260250 Oryza sativa ssp. japonica HOM05D011176 ORTHO05D015099 1.2e-07 60.8 75 48.0
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 1.5e-07 60.5 101 38.6
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-07 60.5 179 29.6
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-07 60.5 101 38.6
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-07 59.7 93 37.6
FAN18G0417 Fragaria x ananassa HOM05D010931 ORTHO05D013603 3.4e-07 59.3 87 39.1
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 3.4e-07 59.3 78 41.0
TAR362G0811 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.5e-07 58.9 90 36.7
FAN04G1211 Fragaria x ananassa HOM05D010931 ORTHO05D013603 5.9e-07 58.5 80 41.2
FAN04G3148 Fragaria x ananassa HOM05D010931 ORTHO05D013603 5.9e-07 58.5 85 40.0
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 1.0e-06 57.8 92 40.2
FvH4_5g03600 Fragaria vesca HOM05D010931 ORTHO05D013603 1.3e-06 57.4 80 41.2
FAN18G3160 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.3e-06 57.4 80 41.2
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-06 57.0 74 44.6
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-06 56.6 93 39.8
FAN25G2077 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.2e-06 56.6 78 41.0
FAN04G3014 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.9e-06 56.2 85 38.8
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-06 56.2 70 38.6
FAN08G1863 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.9e-06 56.2 80 40.0
FvH4_3g28140 Fragaria vesca HOM05D010931 ORTHO05D013603 3.8e-06 55.8 78 39.7
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.0e-06 55.5 72 38.9
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.0e-06 55.5 85 34.1
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 6.5e-06 55.1 93 40.9
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.5e-06 55.1 93 40.9
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.5e-06 54.7 70 37.1


User provided reference genes

Program Settings