Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26612 Davidia involucrata HOM05D008806 ORTHO05D003654 2.1e-81 305.8 175 100.0
Dinv21293 Davidia involucrata HOM05D050188 ORTHO05D003654 1.7e-22 110.2 118 65.3
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 2.7e-20 102.8 149 49.0
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 3.0e-19 99.4 145 46.2
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 3.9e-19 99.0 151 41.7
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 1.1e-18 97.4 147 43.5
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 1.9e-18 96.7 154 43.5
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 2.5e-18 96.3 146 42.5
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 4.3e-18 95.5 138 48.6
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 1.8e-16 90.1 155 44.5
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 3.1e-16 89.4 158 43.7
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 4.0e-16 89.0 145 52.4
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 5.2e-16 88.6 146 41.1
FAN05G0544 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.2e-15 87.4 143 40.6
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 2.6e-15 86.3 144 41.7
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 9.9e-15 84.3 146 39.7
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 1.7e-14 83.6 143 46.9
Manes.12G064700 Manihot esculenta HOM05D008806 ORTHO05D003654 1.7e-14 83.6 144 42.4
Manes.13G062200 Manihot esculenta HOM05D008806 ORTHO05D003654 8.4e-14 81.3 143 40.6
FAN14G2730 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.1e-13 80.9 143 46.2
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 1.4e-13 80.5 153 44.4
Rhsim06G0176100 Rhododendron simsii HOM05D008806 ORTHO05D003654 2.4e-13 79.7 137 53.3
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 5.4e-13 78.6 142 38.0
Gohir.D07G198000 Gossypium hirsutum HOM05D008806 ORTHO05D003654 9.2e-13 77.8 138 34.8
Gorai.001G221600 Gossypium raimondii HOM05D008806 ORTHO05D003654 9.2e-13 77.8 138 34.8
Gohir.A07G191701 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.6e-12 77.0 140 37.9
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 2.1e-12 76.6 153 49.0
Sed0022932 Sechium edule HOM05D008806 ORTHO05D003654 2.1e-12 76.6 138 35.5
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 2.7e-12 76.3 148 43.9
Sed0025236 Sechium edule HOM05D008806 ORTHO05D003654 6.0e-12 75.1 138 45.7
ClCG02G002830 Citrullus lanatus HOM05D008806 ORTHO05D003654 3.9e-11 72.4 151 44.4
Sabra14G0126900 Salix brachista HOM05D008806 ORTHO05D003654 3.9e-11 72.4 161 31.1
TAR629G1912 Trochodendron aralioides HOM05D005871 ORTHO05D003654 3.9e-11 72.4 139 51.8
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 5.1e-11 72.0 166 41.0
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 1.1e-10 70.9 180 43.3
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 3.3e-10 69.3 187 35.3
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 7.3e-10 68.2 154 35.7
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.3e-10 68.2 151 43.0
Potri.014G166900 Populus trichocarpa HOM05D008806 ORTHO05D003654 7.3e-10 68.2 151 34.4
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 9.6e-10 67.8 111 41.4
Gorai.001G221500 Gossypium raimondii HOM05D008806 ORTHO05D003654 1.6e-09 67.0 143 36.4
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.1e-09 66.6 160 38.8
COL.COLO4_33339 Corchorus olitorius HOM05D008806 ORTHO05D003654 6.2e-09 65.1 142 44.4
MELO3C028684.2 Cucumis melo HOM05D008806 ORTHO05D003654 6.2e-09 65.1 148 43.9
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 6.2e-09 65.1 146 34.9
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.1e-08 64.3 158 41.1
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.1e-08 64.3 149 32.2
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 1.4e-08 63.9 203 27.6
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.4e-08 63.9 170 38.2
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.4e-08 63.9 149 33.6
TWI36G1583 Tripterygium wilfordii HOM05D008806 ORTHO05D003654 1.4e-08 63.9 136 36.0
Atru.chr6.3383_Atru.chr6.3384 Acer truncatum HOM05D008806 ORTHO05D003654 3.1e-08 62.8 144 33.3
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 3.1e-08 62.8 155 32.3
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 4.0e-08 62.4 159 39.0
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 5.2e-08 62.0 152 34.9
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 6.8e-08 61.6 170 40.6
Nitab4.5_0001701g0160 Nicotiana tabacum HOM05D016037 ORTHO05D003654 8.9e-08 61.2 134 40.3
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.5e-07 60.5 176 38.6
Gohir.D07G197900 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.5e-07 60.5 146 32.2
THA.LOC104822734 Tarenaya hassleriana HOM05D010616 ORTHO05D003654 3.4e-07 59.3 161 26.7
Eucgr.F02055 Eucalyptus grandis HOM05D005871 ORTHO05D003654 5.8e-07 58.5 189 29.1
SHI10155 Sapria himalayana HOM05D008806 ORTHO05D003654 7.6e-07 58.2 138 37.0
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 1.3e-06 57.4 161 29.2
Rhsim06G0176000 Rhododendron simsii HOM05D005871 ORTHO05D003654 1.3e-06 57.4 150 44.0
BcaB06g25485 Brassica carinata HOM05D010616 ORTHO05D003654 1.7e-06 57.0 156 33.3
A05p36410 Brassica napus HOM05D010616 ORTHO05D003654 1.7e-06 57.0 156 30.8
THA.LOC104810289 Tarenaya hassleriana HOM05D010616 ORTHO05D003654 1.7e-06 57.0 158 31.0
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 2.2e-06 56.6 192 30.7
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 2.2e-06 56.6 171 33.9
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 2.9e-06 56.2 194 30.4
BraA05t22441Z Brassica rapa HOM05D010616 ORTHO05D003654 3.8e-06 55.8 156 30.8
Oeu029962.1 Olea europaea HOM05D016037 ORTHO05D003654 3.8e-06 55.8 136 44.9
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 4.9e-06 55.5 155 31.0
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 4.9e-06 55.5 171 29.2
AT3G13130 Arabidopsis thaliana HOM05D010616 ORTHO05D003654 6.4e-06 55.1 175 31.4
Thhalv10021559m.g Eutrema salsugineum HOM05D010616 ORTHO05D003654 6.4e-06 55.1 167 29.9
AL3G42140 Arabidopsis lyrata HOM05D011557 ORTHO05D013745 8.4e-06 54.7 148 32.4
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 8.4e-06 54.7 148 30.4
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 8.4e-06 54.7 148 31.1


User provided reference genes

Program Settings