Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26512 Davidia involucrata HOM05D006366 ORTHO05D008467 8.8e-122 440.3 218 100.0
Nitab4.5_0006644g0050 Nicotiana tabacum HOM05D006366 ORTHO05D008467 3.6e-91 338.6 237 73.4
Peaxi162Scf00351g00618 Petunia axillaris HOM05D006366 ORTHO05D008467 4.0e-90 335.1 237 72.2
Rhsim11G0024700 Rhododendron simsii HOM05D006366 ORTHO05D008467 6.8e-90 334.3 248 69.8
Actinidia32776 Actinidia chinensis HOM05D006366 ORTHO05D008467 1.5e-89 333.2 243 71.6
arahy.Tifrunner.gnm1.ann1.ZW16GX Arachis hypogaea HOM05D006366 ORTHO05D008467 7.5e-89 330.9 209 76.6
Prupe.3G191400 Prunus persica HOM05D006366 ORTHO05D008467 7.5e-89 330.9 238 71.0
PGSC0003DMG400000936 Solanum tuberosum HOM05D006366 ORTHO05D008467 7.5e-89 330.9 237 71.7
CSS0005885 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 1.3e-88 330.1 245 69.4
CAN.G946.5 Capsicum annuum HOM05D006366 ORTHO05D008467 8.3e-88 327.4 240 70.0
SalBow7G2372 Salvia bowleyana HOM05D006366 ORTHO05D008467 1.1e-87 327.0 243 70.4
MSTRG.24998 Avicennia marina HOM05D006366 ORTHO05D008467 4.1e-87 325.1 237 70.0
Solyc07g044830.3 Solanum lycopersicum HOM05D006366 ORTHO05D008467 4.1e-87 325.1 242 70.2
HanXRQChr17g0540961 Helianthus annuus HOM05D006366 ORTHO05D008467 7.1e-87 324.3 245 69.4
Hma1.2p1_0451F.1_g155730 Hydrangea macrophylla HOM05D006366 ORTHO05D008467 9.2e-87 323.9 238 69.3
CSS0048073 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 2.1e-86 322.8 242 69.0
Sopen07g023380 Solanum pennellii HOM05D006366 ORTHO05D008467 2.7e-86 322.4 242 69.4
MD09G1135300 Malus domestica HOM05D006366 ORTHO05D008467 1.0e-85 320.5 238 67.6
TAR624G0611 Trochodendron aralioides HOM05D006366 ORTHO05D008467 1.7e-85 319.7 239 69.0
Cc05_g00620 Coffea canephora HOM05D006366 ORTHO05D008467 3.0e-85 318.9 241 68.0
PGR004G2515 Punica granatum HOM05D006366 ORTHO05D008467 5.1e-85 318.2 208 72.6
RcHm_v2.0_Chr2g0154731 Rosa chinensis HOM05D006366 ORTHO05D008467 5.1e-85 318.2 233 68.2
Eucgr.K01331 Eucalyptus grandis HOM05D006366 ORTHO05D008467 6.6e-85 317.8 228 70.2
CANSAT64G1607 Cannabis sativa HOM05D006366 ORTHO05D008467 3.3e-84 315.5 231 68.0
GSVIVG01012987001 Vitis vinifera HOM05D006366 ORTHO05D008467 3.3e-84 315.5 215 73.5
TWI60G0958 Tripterygium wilfordii HOM05D006366 ORTHO05D008467 4.3e-84 315.1 233 69.5
arahy.Tifrunner.gnm1.ann1.Q8HZUY Arachis hypogaea HOM05D006366 ORTHO05D008467 9.5e-84 313.9 242 66.1
Ciclev10009311m.g Citrus clementina HOM05D006366 ORTHO05D008467 9.5e-84 313.9 235 67.7
Migut.C00287 Erythranthe guttata HOM05D006366 ORTHO05D008467 9.5e-84 313.9 237 68.4
Atru.chr8.945 Acer truncatum HOM05D006366 ORTHO05D008467 1.6e-83 313.2 234 70.5
Potri.016G022700 Populus trichocarpa HOM05D006366 ORTHO05D008467 2.1e-83 312.8 244 67.2
Thecc.01G164300 Theobroma cacao HOM05D006366 ORTHO05D008467 3.6e-83 312.0 230 70.0
Actinidia01262 Actinidia chinensis HOM05D006366 ORTHO05D008467 6.2e-83 311.2 220 74.1
Cfa017853 Carpinus fangiana HOM05D006366 ORTHO05D008467 1.1e-82 310.5 240 67.5
Glyma.20G065200 Glycine max HOM05D006366 ORTHO05D008467 1.1e-82 310.5 237 67.1
Gohir.D12G085600 Gossypium hirsutum HOM05D006366 ORTHO05D008467 1.4e-82 310.1 232 68.1
Nn3g18048 Nelumbo nucifera HOM05D006366 ORTHO05D008467 1.8e-82 309.7 237 65.8
Duzib147G0458 Durio zibethinus HOM05D006366 ORTHO05D008467 2.3e-82 309.3 232 67.7
Gohir.A12G087400 Gossypium hirsutum HOM05D006366 ORTHO05D008467 2.3e-82 309.3 232 68.1
Sabra16G0028900 Salix brachista HOM05D006366 ORTHO05D008467 2.3e-82 309.3 244 66.0
Lsat_1_v5_gn_3_36241 Lactuca sativa HOM05D006366 ORTHO05D008467 8.9e-82 307.4 212 73.6
Glyma.13G004000 Glycine max HOM05D006366 ORTHO05D008467 1.2e-81 307.0 237 66.7
DCAR_009833 Daucus carota HOM05D006366 ORTHO05D008467 5.8e-81 304.7 246 65.9
Sed0019883 Sechium edule HOM05D006366 ORTHO05D008467 7.6e-81 304.3 235 64.7
EL10Ac9g22887 Beta vulgaris HOM05D006366 ORTHO05D008467 9.9e-81 303.9 232 65.9
COL.COLO4_29916 Corchorus olitorius HOM05D006366 ORTHO05D008467 9.9e-81 303.9 232 67.2
MBI07_g10945_MAGBIO Magnolia biondii HOM05D006366 ORTHO05D008467 9.9e-81 303.9 247 63.2
AUR62015180 Chenopodium quinoa HOM05D006366 ORTHO05D008467 1.3e-80 303.5 238 65.1
Manes.09G000100 Manihot esculenta HOM05D006366 ORTHO05D008467 1.7e-80 303.1 235 66.8
SGA_v2.0_scaffold26G11309 Striga asiatica HOM05D006366 ORTHO05D008467 1.7e-80 303.1 238 65.5
Psat5g107960 Pisum sativum HOM05D006366 ORTHO05D008467 4.9e-80 301.6 237 65.0
AUR62017635 Chenopodium quinoa HOM05D006366 ORTHO05D008467 6.4e-80 301.2 238 64.7
Phvul.006G002200 Phaseolus vulgaris HOM05D006366 ORTHO05D008467 6.4e-80 301.2 237 65.4
Lj6g0003976 Lotus japonicus HOM05D006366 ORTHO05D008467 8.4e-80 300.8 237 64.6
THA.LOC104803019 Tarenaya hassleriana HOM05D006366 ORTHO05D008467 8.4e-80 300.8 233 65.7
FAN09G0641 Fragaria x ananassa HOM05D006366 ORTHO05D008467 1.9e-79 299.7 234 65.0
Gorai.008G096000 Gossypium raimondii HOM05D006366 ORTHO05D008467 1.9e-79 299.7 253 62.8
ECA246G1127 Erigeron canadensis HOM05D006366 ORTHO05D008467 2.4e-79 299.3 224 70.5
PSO541G2638 Papaver somniferum HOM05D006366 ORTHO05D008467 2.4e-79 299.3 237 64.6
Medtr3g081290 Medicago truncatula HOM05D006366 ORTHO05D008467 7.1e-79 297.7 237 64.6
Lalb_Chr22g0360801 Lupinus albus HOM05D006366 ORTHO05D008467 2.1e-78 296.2 231 64.9
Carub.0007s2713 Capsella rubella HOM05D006366 ORTHO05D008467 4.6e-78 295.0 235 65.1
MELO3C026394.2 Cucumis melo HOM05D006366 ORTHO05D008467 6.0e-78 294.7 209 68.9
CsaV3_4G032210 Cucumis sativus L. HOM05D006366 ORTHO05D008467 7.8e-78 294.3 235 64.3
PSO675G0146 Papaver somniferum HOM05D006366 ORTHO05D008467 1.3e-77 293.5 230 64.8
Aa31LG9G2360 Aethionema arabicum HOM05D006366 ORTHO05D008467 3.9e-77 292.0 233 62.7
AT4G14965 Arabidopsis thaliana HOM05D006366 ORTHO05D008467 8.6e-77 290.8 233 63.1
CARHR221600 Cardamine hirsuta HOM05D006366 ORTHO05D008467 1.1e-76 290.4 233 62.7
Nitab4.5_0006724g0060 Nicotiana tabacum HOM05D001798 ORTHO05D008467 1.5e-76 290.0 256 64.1
Thhalv10026107m.g Eutrema salsugineum HOM05D006366 ORTHO05D008467 7.3e-76 287.7 233 62.2
Os03g0205500 Oryza sativa ssp. japonica HOM05D006366 ORTHO05D008467 7.3e-76 287.7 239 59.0
Sp7g13140 Schrenkiella parvula HOM05D006366 ORTHO05D008467 1.2e-75 287.0 233 63.5
Oeu011642.1 Olea europaea HOM05D006366 ORTHO05D008467 2.8e-75 285.8 217 68.7
AL7G40860 Arabidopsis lyrata HOM05D006366 ORTHO05D008467 4.7e-75 285.0 233 62.2
ATR0737G147 Amborella trichopoda HOM05D006366 ORTHO05D008467 8.1e-75 284.3 238 58.8
Aqoxy1G01337 Aquilegia oxysepala HOM05D006366 ORTHO05D008467 8.1e-75 284.3 268 56.0
Sabra16G0023400 Salix brachista HOM05D006366 ORTHO05D008467 8.1e-75 284.3 307 52.4
A05p16880 Brassica napus HOM05D006366 ORTHO05D008467 1.1e-74 283.9 233 62.2
BraA05t20592Z Brassica rapa HOM05D006366 ORTHO05D008467 1.1e-74 283.9 233 62.2
FAN14G5422 Fragaria x ananassa HOM05D006366 ORTHO05D008467 1.1e-74 283.9 234 63.2
Zm00001eb400650 Zea mays HOM05D006366 ORTHO05D008467 1.1e-74 283.9 231 60.2
Lj3A1010G53 Lonicera japonica HOM05D006366 ORTHO05D008467 1.4e-74 283.5 257 61.5
HPP92_021470 Vanilla planifolia HOM05D006366 ORTHO05D008467 2.4e-74 282.7 232 61.2
C06p16670 Brassica napus HOM05D006366 ORTHO05D008467 5.2e-74 281.6 233 61.8
BolC6t36868H Brassica oleracea HOM05D006366 ORTHO05D008467 5.2e-74 281.6 233 61.8
BcaB02g07847 Brassica carinata HOM05D006366 ORTHO05D008467 8.9e-74 280.8 233 60.9
VMungo0540G1919 Vigna mungo HOM05D006366 ORTHO05D008467 2.0e-73 279.6 225 64.4
BcaC08g44258 Brassica carinata HOM05D006366 ORTHO05D008467 1.9e-71 273.1 227 62.1
TPR.G31172 Trifolium pratense HOM05D006366 ORTHO05D008467 1.2e-70 270.4 208 67.8
SEGI_23922 Sequoiadendron giganteum HOM05D006366 ORTHO05D008467 3.0e-69 265.8 241 55.2
FAN05G0502 Fragaria x ananassa HOM05D006366 ORTHO05D008467 8.1e-67 257.7 241 56.4
vmacro00060 Vaccinium macrocarpon HOM05D006366 ORTHO05D008467 1.0e-61 240.7 137 81.8
SHI11338 Sapria himalayana HOM05D006366 ORTHO05D008467 8.7e-61 237.7 265 49.4
ClCG11G016700 Citrullus lanatus HOM05D006366 ORTHO05D008467 3.6e-59 232.3 154 72.7
Cpa.g.sc8.298 Carica papaya HOM05D006366 ORTHO05D008467 6.0e-54 214.9 127 78.0
FvH4_6g40100 Fragaria vesca HOM05D006366 ORTHO05D008467 1.3e-53 213.8 182 63.2
CSS0012855 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 8.1e-51 204.5 114 82.5
CSS0020773 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 3.1e-50 202.6 114 81.6
SMO367G0820 Selaginella moellendorffii HOM05D006366 ORTHO05D008467 3.1e-50 202.6 208 47.1
unitig_0.g1057 Utricularia gibba HOM05D001088 ORTHO05D002099 4.0e-50 202.2 183 55.7
Ca_16310_v3 Cicer arietinum L. HOM05D006366 ORTHO05D008467 3.8e-48 195.7 111 81.1
Mapoly0115s0059 Marchantia polymorpha HOM05D006366 ORTHO05D008467 6.5e-48 194.9 233 42.5
CiPaw.15G093200 Carya illinoinensis HOM05D006366 ORTHO05D008467 2.5e-47 193.0 112 79.5
Hund24327 Selenicereus undatus HOM05D006366 ORTHO05D008467 7.1e-47 191.4 115 76.5
Sc06g0005840 Simmondsia chinensis HOM05D006366 ORTHO05D008467 1.2e-46 190.7 120 73.3
Pp3c21_2980 Physcomitrium patens HOM05D006366 ORTHO05D008467 3.3e-44 182.6 232 41.4
Peaxi162Scf01158g00018 Petunia axillaris HOM05D006366 ORTHO05D008467 2.1e-43 179.9 99 86.9
Pp3c18_20590 Physcomitrium patens HOM05D006366 ORTHO05D008467 4.1e-42 175.6 232 40.5
CBR_g19221 Chara braunii HOM05D006366 ORTHO05D008467 4.1e-34 149.1 206 40.3
Haze_18340 Corylus avellana HOM05D006366 ORTHO05D008467 1.2e-33 147.5 240 41.2
Potri.006G023801 Populus trichocarpa HOM05D006366 ORTHO05D008467 3.0e-29 132.9 78 75.6
Cre03.g148100 Chlamydomonas reinhardtii HOM05D006366 ORTHO05D008467 7.4e-28 128.3 208 37.5
PRCOL_00003273 Prasinoderma coloniale HOM05D006366 ORTHO05D008467 9.7e-28 127.9 159 44.0
CiPaw.15G093100 Carya illinoinensis HOM05D006366 ORTHO05D008467 3.1e-26 122.9 120 60.8
MCO15G416 Micromonas commoda HOM05D006366 ORTHO05D008467 5.7e-20 102.1 158 38.0
vmacro00059 Vaccinium macrocarpon HOM05D006505 ORTHO05D008086 1.8e-13 80.5 84 53.6
Aqoxy2G02028 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.1e-10 68.2 54 61.1
COL.COLO4_33717 Corchorus olitorius HOM05D006366 ORTHO05D008467 6.1e-06 55.5 45 62.2


User provided reference genes

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