Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26497 Davidia involucrata HOM05D005686 ORTHO05D006798 2.1e-100 369.0 184 100.0
Hma1.2p1_0391F.1_g142870 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 2.7e-63 245.7 159 78.0
CSS0031712 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 4.6e-63 245.0 146 84.9
CSS0027001 Camellia sinensis var. sinensis HOM05D005686 ORTHO05D006798 7.8e-63 244.2 146 84.9
FvH4_4g00120 Fragaria vesca HOM05D005686 ORTHO05D006798 1.1e-61 240.4 146 82.9
FAN17G2251 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.5e-61 239.2 146 82.9
MD04G1000800 Malus domestica HOM05D005686 ORTHO05D006798 3.3e-61 238.8 144 82.6
RcHm_v2.0_Chr4g0384721 Rosa chinensis HOM05D005686 ORTHO05D006798 7.3e-61 237.7 146 82.2
FAN22G1914 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.8e-60 235.7 146 82.2
CiPaw.08G000400 Carya illinoinensis HOM05D005686 ORTHO05D006798 3.6e-60 235.3 146 80.8
Cfa012874 Carpinus fangiana HOM05D005686 ORTHO05D006798 6.2e-60 234.6 157 75.8
Atru.chr7.1021 Acer truncatum HOM05D005686 ORTHO05D006798 4.0e-59 231.9 146 80.1
GSVIVG01034255001 Vitis vinifera HOM05D005686 ORTHO05D006798 6.9e-59 231.1 146 80.1
Ciclev10009500m.g Citrus clementina HOM05D005686 ORTHO05D006798 4.4e-58 228.4 157 74.5
Cpa.g.sc46.112 Carica papaya HOM05D005686 ORTHO05D006798 7.6e-58 227.6 157 73.9
Migut.J00862 Erythranthe guttata HOM05D005686 ORTHO05D006798 7.6e-58 227.6 146 76.7
Manes.18G145300 Manihot esculenta HOM05D005686 ORTHO05D006798 7.6e-58 227.6 157 73.9
Potri.006G080900 Populus trichocarpa HOM05D005686 ORTHO05D006798 7.6e-58 227.6 162 72.8
ClCG03G011610 Citrullus lanatus HOM05D005686 ORTHO05D006798 9.9e-58 227.3 146 77.4
ECA240G1888 Erigeron canadensis HOM05D005686 ORTHO05D006798 1.7e-57 226.5 164 69.5
Lsat_1_v5_gn_7_57081 Lactuca sativa HOM05D005686 ORTHO05D006798 1.7e-57 226.5 164 67.1
vmacro20730 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 4.9e-57 224.9 190 65.8
TWI32G0912 Tripterygium wilfordii HOM05D005686 ORTHO05D006798 6.4e-57 224.6 146 78.1
Nitab4.5_0004788g0010 Nicotiana tabacum HOM05D005686 ORTHO05D006798 2.4e-56 222.6 144 77.8
CAN.G357.2 Capsicum annuum HOM05D005686 ORTHO05D006798 3.2e-56 222.2 163 69.3
Eucgr.C02152 Eucalyptus grandis HOM05D005686 ORTHO05D006798 4.2e-56 221.9 146 77.4
Nitab4.5_0000019g0070 Nicotiana tabacum HOM05D005686 ORTHO05D006798 4.2e-56 221.9 144 77.1
Oeu000268.1 Olea europaea HOM05D005686 ORTHO05D006798 7.1e-56 221.1 157 72.6
PGR142G1985 Punica granatum HOM05D005686 ORTHO05D006798 7.1e-56 221.1 146 76.7
MSTRG.5975 Avicennia marina HOM05D005686 ORTHO05D006798 9.3e-56 220.7 143 74.8
COL.COLO4_09003 Corchorus olitorius HOM05D005686 ORTHO05D006798 9.3e-56 220.7 146 76.0
Cc06_g23520 Coffea canephora HOM05D005686 ORTHO05D006798 1.2e-55 220.3 146 78.8
Sed0010250 Sechium edule HOM05D005686 ORTHO05D006798 1.2e-55 220.3 146 76.0
Thecc.09G202000 Theobroma cacao HOM05D005686 ORTHO05D006798 2.7e-55 219.2 146 76.7
TAR383G0056 Trochodendron aralioides HOM05D005686 ORTHO05D006798 3.5e-55 218.8 145 75.2
HanXRQChr03g0066651 Helianthus annuus HOM05D005686 ORTHO05D006798 4.6e-55 218.4 164 65.9
Potri.018G151500 Populus trichocarpa HOM05D005686 ORTHO05D006798 1.0e-54 217.2 146 74.7
CANSAT80G2136 Cannabis sativa HOM05D005686 ORTHO05D006798 1.3e-54 216.9 146 72.6
PSO063G6522 Papaver somniferum HOM05D005686 ORTHO05D006798 1.7e-54 216.5 146 69.9
PSO170G1777 Papaver somniferum HOM05D005686 ORTHO05D006798 1.7e-54 216.5 146 69.9
QL11p005743 Quercus lobata HOM05D005686 ORTHO05D006798 2.3e-54 216.1 198 61.6
Glyma.01G001000 Glycine max HOM05D005686 ORTHO05D006798 8.7e-54 214.2 156 69.9
DCAR_014582 Daucus carota HOM05D005686 ORTHO05D006798 1.1e-53 213.8 146 72.6
Aqoxy7G02566 Aquilegia oxysepala HOM05D005686 ORTHO05D006798 2.5e-53 212.6 146 75.3
Sc23g0005700 Simmondsia chinensis HOM05D005686 ORTHO05D006798 9.6e-53 210.7 156 66.7
Glyma.08G359900 Glycine max HOM05D005686 ORTHO05D006798 1.3e-52 210.3 152 67.8
Gorai.004G024000 Gossypium raimondii HOM05D005686 ORTHO05D006798 1.3e-52 210.3 158 70.3
Gohir.A08G016700 Gossypium hirsutum HOM05D005686 ORTHO05D006798 3.6e-52 208.8 158 69.6
Gohir.D08G027100 Gossypium hirsutum HOM05D005686 ORTHO05D006798 3.6e-52 208.8 147 73.5
Lj2g0013423 Lotus japonicus HOM05D005686 ORTHO05D006798 3.6e-52 208.8 146 70.5
EL10Ac2g03596 Beta vulgaris HOM05D005686 ORTHO05D006798 8.1e-52 207.6 147 70.1
SGA_v2.0_scaffold21G09585 Striga asiatica HOM05D005686 ORTHO05D006798 8.1e-52 207.6 168 64.3
AUR62020755 Chenopodium quinoa HOM05D005686 ORTHO05D006798 1.1e-51 207.2 146 70.5
BcaB08g36164 Brassica carinata HOM05D005686 ORTHO05D006798 2.4e-51 206.1 146 69.9
BraA03t10552Z Brassica rapa HOM05D005686 ORTHO05D006798 9.0e-51 204.1 146 70.5
HanXRQChr09g0245301 Helianthus annuus HOM05D005686 ORTHO05D006798 9.0e-51 204.1 146 69.9
A10p16070 Brassica napus HOM05D005686 ORTHO05D006798 1.2e-50 203.8 146 68.5
BraA10t43622Z Brassica rapa HOM05D005686 ORTHO05D006798 1.2e-50 203.8 146 68.5
AUR62027958 Chenopodium quinoa HOM05D005686 ORTHO05D006798 1.2e-50 203.8 146 69.2
Peaxi162Scf00322g00914 Petunia axillaris HOM05D005686 ORTHO05D006798 1.2e-50 203.8 158 69.0
ATR0626G256 Amborella trichopoda HOM05D005686 ORTHO05D006798 1.5e-50 203.4 157 66.9
C03p14560 Brassica napus HOM05D005686 ORTHO05D006798 2.0e-50 203.0 146 69.2
C09p50020 Brassica napus HOM05D005686 ORTHO05D006798 2.0e-50 203.0 146 68.5
BolC9t57855H Brassica oleracea HOM05D005686 ORTHO05D006798 2.0e-50 203.0 146 68.5
BcaC04g19906 Brassica carinata HOM05D005686 ORTHO05D006798 2.6e-50 202.6 146 67.8
arahy.Tifrunner.gnm1.ann1.G6JDG7 Arachis hypogaea HOM05D005686 ORTHO05D006798 4.5e-50 201.8 157 67.5
arahy.Tifrunner.gnm1.ann1.1A52WD Arachis hypogaea HOM05D005686 ORTHO05D006798 5.8e-50 201.4 157 67.5
unitig_699.g19254 Utricularia gibba HOM05D005686 ORTHO05D006798 7.6e-50 201.1 145 69.0
vmacro20894 Vaccinium macrocarpon HOM05D005686 ORTHO05D006798 7.6e-50 201.1 245 51.0
Sp6g19800 Schrenkiella parvula HOM05D005686 ORTHO05D006798 9.9e-50 200.7 146 69.9
CARHR271940 Cardamine hirsuta HOM05D005686 ORTHO05D006798 1.3e-49 200.3 146 68.5
Ca_25642_v3 Cicer arietinum L. HOM05D005686 ORTHO05D006798 1.3e-49 200.3 155 63.9
Hma1.2p1_0394F.1_g143240 Hydrangea macrophylla HOM05D005686 ORTHO05D006798 2.2e-49 199.5 126 83.3
AL8G34220 Arabidopsis lyrata HOM05D005686 ORTHO05D006798 2.9e-49 199.1 146 68.5
A03p12400 Brassica napus HOM05D005686 ORTHO05D006798 4.9e-49 198.4 146 69.2
BcaB01g04476 Brassica carinata HOM05D005686 ORTHO05D006798 8.4e-49 197.6 146 67.1
BolC3t13898H Brassica oleracea HOM05D005686 ORTHO05D006798 8.4e-49 197.6 146 69.2
AT5G58110 Arabidopsis thaliana HOM05D005686 ORTHO05D006798 1.9e-48 196.4 146 67.8
Aa31LG3G13950 Aethionema arabicum HOM05D005244 ORTHO05D006539 2.4e-48 196.1 146 67.1
Carub.0008s1867 Capsella rubella HOM05D005686 ORTHO05D006798 2.4e-48 196.1 146 67.8
Psat1g052000 Pisum sativum HOM05D005686 ORTHO05D006798 5.4e-48 194.9 146 67.8
Thhalv10014732m.g Eutrema salsugineum HOM05D005686 ORTHO05D006798 7.1e-48 194.5 146 65.8
THA.LOC104811843 Tarenaya hassleriana HOM05D005686 ORTHO05D006798 7.1e-48 194.5 146 66.4
Os02g0139100 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 3.5e-47 192.2 146 65.8
Medtr6g093220 Medicago truncatula HOM05D005686 ORTHO05D006798 4.6e-47 191.8 156 62.8
MELO3C010013.2 Cucumis melo HOM05D005686 ORTHO05D006798 1.8e-46 189.9 228 49.6
Os06g0703800 Oryza sativa ssp. japonica HOM05D005686 ORTHO05D006798 1.8e-46 189.9 155 63.2
Oeu000956.1 Olea europaea HOM05D005686 ORTHO05D006798 6.7e-46 188.0 129 74.4
Zm00001eb232010 Zea mays HOM05D005686 ORTHO05D006798 1.5e-45 186.8 146 63.7
Rhsim01G0102500 Rhododendron simsii HOM05D005686 ORTHO05D006798 2.5e-45 186.0 289 44.3
Lalb_Chr24g0401731 Lupinus albus HOM05D005686 ORTHO05D006798 1.3e-44 183.7 171 53.2
CDE04G0009 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 1.6e-44 183.3 146 64.4
Duzib170G0214 Durio zibethinus HOM05D005686 ORTHO05D006798 2.8e-44 182.6 129 72.1
BcaB01g04553 Brassica carinata HOM05D005686 ORTHO05D006798 6.2e-44 181.4 151 61.6
HPP92_017040 Vanilla planifolia HOM05D005686 ORTHO05D006798 1.5e-42 176.8 157 61.1
Oeu018307.1 Olea europaea HOM05D005686 ORTHO05D006798 4.5e-42 175.3 134 66.4
Prupe.1G000800 Prunus persica HOM05D005686 ORTHO05D006798 7.6e-42 174.5 190 55.8
FAN12G3064 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.9e-41 172.6 102 81.4
CsaV3_1G044180 Cucumis sativus L. HOM05D005686 ORTHO05D006798 1.9e-40 169.9 102 79.4
SEGI_10084 Sequoiadendron giganteum HOM05D005686 ORTHO05D006798 3.0e-38 162.5 163 52.8
unitig_899.g15184 Utricularia gibba HOM05D000036 ORTHO05D000095 8.7e-38 161.0 139 59.7
Gorai.009G341500 Gossypium raimondii HOM05D005686 ORTHO05D006798 2.1e-31 139.8 123 60.2
Gohir.D05G318500 Gossypium hirsutum HOM05D005686 ORTHO05D006798 4.6e-31 138.7 116 62.1
TPR.G21341 Trifolium pratense HOM05D005686 ORTHO05D006798 6.1e-31 138.3 132 55.3
Pp3c5_4250 Physcomitrium patens HOM05D005686 ORTHO05D006798 1.9e-29 133.3 160 43.8
SMO164G0027 Selaginella moellendorffii HOM05D005686 ORTHO05D006798 2.5e-29 132.9 145 47.6
CDE07G1048 Ceratophyllum demersum HOM05D005686 ORTHO05D006798 7.4e-29 131.3 124 57.3
MBI13_g08742_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 2.4e-27 126.3 136 55.9
Pp3c16_2550 Physcomitrium patens HOM05D005686 ORTHO05D006798 2.4e-27 126.3 153 43.8
Mapoly0062s0098 Marchantia polymorpha HOM05D005686 ORTHO05D006798 3.4e-26 122.5 147 44.9
MBI13_g46510_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 5.9e-26 121.7 71 83.1
Actinidia07538 Actinidia chinensis HOM05D005686 ORTHO05D006798 9.4e-24 114.4 58 94.8
MBI13_g33582_MAGBIO Magnolia biondii HOM05D005686 ORTHO05D006798 6.1e-23 111.7 74 74.3
Oeu021239.2 Olea europaea HOM05D005686 ORTHO05D006798 2.0e-21 106.7 74 71.6
Hund19347 Selenicereus undatus HOM05D005686 ORTHO05D006798 1.4e-19 100.5 146 41.1
FAN26G0690 Fragaria x ananassa HOM05D005686 ORTHO05D006798 2.4e-19 99.8 96 58.3
Nn8g41269 Nelumbo nucifera HOM05D005686 ORTHO05D006798 4.5e-18 95.5 57 78.9
FvH4_1g23212 Fragaria vesca HOM05D005686 ORTHO05D006798 1.3e-17 94.0 99 51.5
SMO146G0036 Selaginella moellendorffii HOM05D005686 ORTHO05D006798 5.0e-17 92.0 147 35.4
FAN25G3234 Fragaria x ananassa HOM05D005686 ORTHO05D006798 8.5e-17 91.3 91 54.9
FAN17G2013 Fragaria x ananassa HOM05D005686 ORTHO05D006798 1.9e-16 90.1 91 53.8
Lju50E1T0 Lonicera japonica HOM05D005686 ORTHO05D006798 3.2e-16 89.4 55 80.0
Haze_21245 Corylus avellana HOM05D005686 ORTHO05D006798 1.4e-14 84.0 46 78.3
FvH4_7g03690 Fragaria vesca HOM05D005686 ORTHO05D006798 3.9e-14 82.4 48 79.2
FAN01G2054 Fragaria x ananassa HOM05D005686 ORTHO05D006798 6.7e-14 81.6 96 53.1
FAN07G2653 Fragaria x ananassa HOM05D005686 ORTHO05D006798 7.4e-13 78.2 51 72.5
VMungo0464G1575 Vigna mungo HOM05D005686 ORTHO05D006798 2.8e-12 76.3 56 62.5
FAN23G2196 Fragaria x ananassa HOM05D005686 ORTHO05D006798 3.1e-11 72.8 48 75.0
arahy.Tifrunner.gnm1.ann1.U8PUWG Arachis hypogaea HOM05D005611 ORTHO05D006852 7.0e-11 71.6 59 66.1
MCO14G409 Micromonas commoda HOM05D005686 ORTHO05D006798 1.2e-10 70.9 119 35.3
arahy.Tifrunner.gnm1.ann1.11LFFZ Arachis hypogaea HOM05D005686 ORTHO05D006798 2.0e-10 70.1 62 62.9
Cre07.g321850 Chlamydomonas reinhardtii HOM05D005686 ORTHO05D006798 1.6e-07 60.5 147 29.3
SGA_v2.0_scaffold25G11073 Striga asiatica HOM05D005686 ORTHO05D006798 6.7e-06 55.1 89 38.2


User provided reference genes

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