Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 4.7e-197 691.0 358 100.0
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 1.3e-159 566.6 359 85.0
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 3.0e-135 485.7 362 72.1
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.3e-127 459.5 359 69.6
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 6.7e-119 431.4 348 67.5
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 8.5e-114 414.5 362 63.5
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 1.1e-113 414.1 350 63.4
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 2.5e-113 412.9 360 64.7
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 5.5e-113 411.8 405 59.5
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.0e-111 407.5 362 63.5
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.4e-111 407.1 361 63.2
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.2e-107 394.0 360 61.4
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.9e-105 386.7 362 60.2
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.2e-104 384.0 316 67.1
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 1.4e-103 380.6 345 59.7
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 3.0e-103 379.4 352 60.5
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 2.0e-102 376.7 361 59.6
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 3.4e-102 375.9 345 60.0
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.7e-101 373.6 349 60.2
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.7e-101 372.5 346 60.4
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.1e-100 370.9 358 56.7
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 9.1e-100 367.9 349 57.6
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.6e-99 367.1 358 58.9
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.0e-99 366.7 346 60.1
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 2.0e-99 366.7 330 60.9
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 3.5e-99 365.9 350 58.6
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.9e-99 365.2 349 58.2
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.7e-98 363.6 346 59.8
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 2.9e-98 362.8 349 57.9
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.1e-97 360.9 349 57.0
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.1e-97 360.9 357 57.4
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 5.5e-97 358.6 362 55.8
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 6.1e-96 355.1 358 56.1
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.0e-95 354.4 358 57.3
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.8e-95 353.6 351 56.7
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.8e-95 351.7 365 55.9
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 6.8e-95 351.7 359 56.0
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.2e-94 350.9 355 54.4
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.7e-93 345.9 366 55.2
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 8.3e-93 344.7 366 54.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 9.2e-92 341.3 342 56.7
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 3.5e-91 339.3 357 55.2
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.0e-90 337.8 380 53.2
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 1.9e-89 333.6 356 55.3
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.2e-88 330.9 352 52.6
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 2.6e-86 323.2 340 53.5
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 7.5e-86 321.6 356 52.2
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 9.8e-86 321.2 350 53.4
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 2.4e-84 316.6 341 53.4
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 7.0e-84 315.1 362 51.9
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.3e-82 310.8 347 52.7
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.3e-82 310.1 306 55.6
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 3.9e-82 309.3 353 54.1
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.1e-81 307.8 375 52.0
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 7.3e-81 305.1 350 52.0
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.6e-80 303.9 306 53.9
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 2.8e-80 303.1 346 52.3
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.1e-79 301.2 391 48.8
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 1.4e-79 300.8 465 42.4
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 2.6e-78 296.6 349 52.4
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 4.4e-78 295.8 351 50.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 4.9e-77 292.4 349 51.0
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.1e-76 291.2 389 48.1
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.9e-76 290.4 346 51.7
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 2.4e-76 290.0 366 48.9
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 4.1e-76 289.3 286 54.5
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 9.2e-76 288.1 367 48.5
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 2.1e-75 287.0 347 50.4
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 2.7e-75 286.6 358 49.2
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 4.6e-75 285.8 345 49.6
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 3.9e-74 282.7 345 52.2
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 2.1e-72 276.9 351 47.3
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 4.7e-72 275.8 209 71.8
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 8.1e-72 275.0 348 49.4
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.1e-71 274.6 331 49.5
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.4e-71 274.2 348 48.9
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.0e-70 270.4 264 55.7
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 6.4e-69 265.4 350 48.3
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 5.4e-68 262.3 361 45.7
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.2e-67 261.2 348 47.4
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 6.0e-67 258.8 345 46.7
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.7e-66 257.3 350 45.7
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 2.3e-66 256.9 349 47.9
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 3.0e-66 256.5 356 46.3
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 3.0e-66 256.5 355 47.6
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 8.6e-66 255.0 353 46.7
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.1e-65 254.6 347 46.4
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 1.5e-65 254.2 353 47.3
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 7.3e-65 251.9 350 46.6
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 9.5e-65 251.5 361 43.2
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 9.5e-65 251.5 352 46.6
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 3.6e-64 249.6 353 45.9
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 6.2e-64 248.8 341 46.0
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.4e-63 246.9 280 52.9
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 4.0e-63 246.1 346 45.7
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 4.4e-62 242.7 355 41.7
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.4e-60 237.7 265 51.3
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 2.4e-60 236.9 352 44.9
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 4.2e-60 236.1 359 44.0
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 9.2e-60 235.0 363 43.5
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 6.0e-59 232.3 316 44.9
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 6.6e-58 228.8 210 61.4
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.9e-57 227.3 287 50.2
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 6.2e-56 222.2 311 45.3
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.4e-55 220.3 212 58.0
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 6.9e-55 218.8 354 41.0
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.5e-54 217.6 198 57.6
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 3.4e-54 216.5 370 42.2
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 4.9e-53 212.6 307 46.6
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 6.0e-51 205.7 369 37.1
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 1.4e-47 194.5 269 48.0
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 4.5e-46 189.5 216 51.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 4.5e-46 189.5 315 40.6
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 9.3e-44 181.8 357 38.7
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 2.4e-39 167.2 220 50.0
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 4.0e-39 166.4 264 44.7
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 4.0e-39 166.4 264 44.7
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 4.0e-39 166.4 264 44.7
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 3.2e-36 156.8 173 50.9
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 7.1e-36 155.6 244 45.1
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.6e-35 154.5 253 41.9
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 1.6e-35 154.5 225 46.2
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 2.3e-34 150.6 119 64.7
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 5.6e-33 146.0 291 35.4
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 2.4e-31 140.6 170 50.0
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 3.8e-29 133.3 150 49.3
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 2.8e-24 117.1 403 27.5
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.1e-23 115.2 112 51.8
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 3.8e-21 106.7 90 58.9
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.1e-20 105.1 387 27.6
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 4.2e-20 103.2 95 61.1
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.5e-17 94.0 76 67.1
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.1e-15 87.0 66 65.2
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.7e-13 81.3 66 62.1
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 3.2e-12 77.0 197 33.0
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 1.1e-09 68.6 392 23.5
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 1.5e-09 68.2 242 25.2
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 4.4e-09 66.6 61 65.6
BcaB04g18591 Brassica carinata HOM05D000144 ORTHO05D006884 1.8e-07 61.2 206 31.6
Ah.13g066730 Amaranthus hybridus HOM05D014553 ORTHO05D018255 2.6e-06 57.4 44 63.6


User provided reference genes

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