Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 3.2e-246 854.7 466 100.0
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.1e-156 557.4 450 69.3
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.1e-156 557.4 443 66.8
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.4e-156 557.0 451 67.2
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 1.8e-148 530.0 448 65.8
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.4e-140 503.1 440 63.0
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 3.2e-129 466.1 507 57.6
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 2.5e-126 456.4 442 58.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 2.5e-126 456.4 451 62.1
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.3e-126 455.7 449 57.5
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.7e-126 454.5 447 57.7
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.8e-124 450.3 454 59.5
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 3.1e-124 449.5 393 65.6
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 9.0e-124 448.0 445 58.0
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.9e-122 443.0 401 62.8
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 4.2e-121 439.1 440 58.9
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.4e-119 434.1 446 61.7
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.8e-119 433.7 405 60.2
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.0e-118 430.3 403 64.8
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 9.7e-118 427.9 464 61.2
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.8e-117 425.6 458 53.9
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.5e-115 420.6 455 54.3
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 4.5e-115 419.1 448 54.9
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 5.0e-114 415.6 448 53.3
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 5.5e-113 412.1 438 53.4
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 2.7e-112 409.8 454 57.7
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 3.6e-112 409.5 326 65.6
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.9e-111 406.0 455 53.6
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 2.6e-110 403.3 451 52.5
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 6.3e-109 398.7 454 52.2
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 7.0e-108 395.2 434 53.9
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.9e-106 389.8 421 56.8
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 6.5e-106 388.7 304 64.5
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.5e-105 387.5 683 40.1
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 7.2e-105 385.2 299 64.9
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 9.4e-105 384.8 327 60.6
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 1.6e-104 384.0 442 53.2
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.6e-104 384.0 454 50.7
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 2.7e-104 383.3 445 55.3
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.8e-103 380.6 322 61.5
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.3e-103 380.2 443 51.5
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 4.0e-103 379.4 304 62.8
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.1e-102 377.9 428 55.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.1e-102 377.9 299 63.9
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 1.5e-102 377.5 457 51.9
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 2.6e-102 376.7 444 53.2
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 9.7e-102 374.8 294 64.3
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 2.8e-101 373.2 446 51.8
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 1.8e-100 370.5 403 57.1
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 5.3e-100 369.0 408 55.9
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 7.7e-99 365.2 378 55.0
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 2.9e-98 363.2 445 52.4
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 3.8e-98 362.8 453 51.0
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 8.5e-98 361.7 474 46.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 4.2e-97 359.4 409 49.6
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 7.2e-97 358.6 447 47.7
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 1.6e-96 357.5 444 50.9
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 2.7e-96 356.7 440 50.0
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 3.6e-96 356.3 323 59.4
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 4.7e-96 355.9 282 61.0
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 4.0e-95 352.8 474 46.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 8.8e-95 351.7 454 50.0
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.0e-94 350.5 480 44.4
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 3.7e-93 346.3 434 52.3
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 3.7e-93 346.3 460 45.2
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.8e-92 344.0 440 49.5
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 7.0e-92 342.0 290 58.6
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 2.7e-91 340.1 449 49.4
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.0e-90 335.9 304 57.2
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.1e-89 334.7 330 56.4
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.5e-89 333.6 231 70.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 2.1e-88 330.5 444 44.6
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 4.7e-88 329.3 287 56.4
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 8.0e-88 328.6 334 54.5
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 1.2e-86 324.7 435 44.1
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 5.7e-86 322.4 333 55.6
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.7e-85 320.9 234 65.4
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.7e-85 320.9 329 55.0
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.3e-85 318.9 302 54.3
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 3.1e-84 316.6 332 53.3
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 5.4e-84 315.8 400 51.8
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 1.6e-83 314.3 333 49.5
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.7e-83 313.5 478 45.8
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 7.7e-83 312.0 328 54.3
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 7.7e-83 312.0 332 54.2
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 2.3e-82 310.5 328 53.7
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.1e-81 308.1 331 53.5
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 2.9e-77 293.5 215 68.8
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 1.4e-76 291.2 334 53.6
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 7.8e-75 285.4 483 43.9
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 1.9e-73 280.8 365 47.7
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 3.6e-72 276.6 388 39.9
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 4.0e-71 273.1 414 42.5
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-69 268.1 445 45.4
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 2.4e-68 263.8 299 50.8
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.2e-67 261.5 329 48.9
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.5e-65 254.6 415 40.2
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.5e-62 244.6 210 55.7
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 7.3e-57 225.7 267 50.9
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.1e-55 221.9 197 62.9
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 1.8e-55 221.1 314 45.5
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 2.2e-53 214.2 312 42.9
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.9e-52 211.1 264 48.9
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.9e-52 211.1 326 39.3
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 9.2e-52 208.8 359 42.3
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.2e-48 198.4 257 45.9
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.8e-47 194.5 196 56.1
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 9.9e-46 188.7 265 41.5
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 1.3e-45 188.3 303 38.9
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.0e-43 179.5 304 38.5
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.0e-42 178.7 282 42.2
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.3e-42 178.3 172 53.5
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 6.2e-40 169.5 271 38.4
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 8.1e-40 169.1 303 39.6
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.4e-39 168.3 415 30.8
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 4.4e-38 163.3 147 61.2
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.8e-38 162.9 147 54.4
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 1.9e-36 157.9 451 31.9
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-33 148.7 271 37.3
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 3.3e-33 147.1 345 33.6
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.9e-30 135.6 107 64.5
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.1e-28 129.4 178 43.3
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-25 121.7 86 72.1
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 3.3e-25 120.6 140 50.0
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 1.3e-24 118.6 140 49.3
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 1.5e-22 111.7 196 35.7
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.0e-22 111.3 95 63.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.5e-19 100.5 72 69.4
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.9e-17 94.7 77 63.6
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 5.7e-17 93.2 252 27.8
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.4e-15 87.8 245 29.4
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 1.7e-13 81.6 67 62.7
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 2.5e-12 77.8 68 60.3
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.0e-10 70.9 104 41.3
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 1.1e-09 68.9 57 61.4


User provided reference genes

Program Settings