Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 3.1e-48 194.9 103 100.0
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 3.1e-24 115.2 76 82.9
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 1.6e-20 102.8 77 72.7
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.1e-20 102.4 76 68.4
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 2.7e-20 102.1 76 69.7
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 6.0e-20 100.9 76 67.1
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 3.0e-19 98.6 76 64.5
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 5.1e-19 97.8 79 60.8
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 6.6e-19 97.4 75 62.7
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 6.6e-19 97.4 75 62.7
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 6.6e-19 97.4 76 63.2
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 8.7e-19 97.1 80 60.0
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.1e-18 96.7 78 67.9
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.5e-18 96.3 76 63.2
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.3e-18 95.1 79 59.5
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 3.3e-18 95.1 76 59.2
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 5.6e-18 94.4 82 58.5
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 5.6e-18 94.4 81 59.3
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.6e-17 92.8 71 66.2
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.6e-17 92.8 79 62.0
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.1e-17 92.4 79 59.5
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 2.1e-17 92.4 79 59.5
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 2.1e-17 92.4 74 62.2
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-17 92.4 81 59.3
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-17 92.4 81 59.3
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.1e-17 92.4 81 59.3
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 3.6e-17 91.7 79 59.5
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 6.2e-17 90.9 71 64.8
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 8.1e-17 90.5 81 56.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.1e-16 90.1 79 58.2
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 1.1e-16 90.1 79 57.0
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.1e-16 90.1 79 55.7
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-16 89.7 70 64.3
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 1.4e-16 89.7 77 61.0
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.8e-16 89.4 81 60.5
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 2.4e-16 89.0 78 62.8
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 3.1e-16 88.6 74 62.2
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 3.1e-16 88.6 79 59.5
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 4.0e-16 88.2 76 57.9
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 4.0e-16 88.2 76 57.9
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.0e-16 88.2 81 61.7
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 6.9e-16 87.4 78 61.5
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 6.9e-16 87.4 79 55.7
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 9.0e-16 87.0 76 61.8
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 9.0e-16 87.0 77 62.3
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 9.0e-16 87.0 83 55.4
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 9.0e-16 87.0 70 61.4
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.2e-15 86.7 73 58.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 2.0e-15 85.9 83 62.7
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.6e-15 85.5 80 53.8
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 3.4e-15 85.1 79 62.0
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 4.4e-15 84.7 62 72.6
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 4.4e-15 84.7 62 71.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 4.4e-15 84.7 80 53.8
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 5.8e-15 84.3 72 59.7
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 7.6e-15 84.0 80 58.8
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 7.6e-15 84.0 71 60.6
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 7.6e-15 84.0 93 52.7
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 9.9e-15 83.6 81 59.3
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.3e-14 83.2 94 52.1
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.3e-14 83.2 79 54.4
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.7e-14 82.8 80 57.5
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.7e-14 82.8 69 63.8
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 1.7e-14 82.8 78 59.0
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.2e-14 82.4 77 59.7
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.9e-14 82.0 89 55.1
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 3.8e-14 81.6 80 57.5
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 4.9e-14 81.3 67 62.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 4.9e-14 81.3 83 59.0
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 6.4e-14 80.9 80 56.2
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 6.4e-14 80.9 89 55.1
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 6.4e-14 80.9 77 58.4
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 8.4e-14 80.5 79 50.6
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.1e-13 80.1 67 62.7
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.1e-13 80.1 67 62.7
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.1e-13 80.1 89 53.9
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.4e-13 79.7 79 54.4
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.4e-13 79.7 83 53.0
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 2.4e-13 79.0 82 54.9
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 2.4e-13 79.0 80 55.0
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 4.2e-13 78.2 82 53.7
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 4.2e-13 78.2 81 53.1
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 7.1e-13 77.4 79 53.2
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 9.3e-13 77.0 81 55.6
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 9.3e-13 77.0 66 65.2
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.2e-12 76.6 75 54.7
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.2e-12 76.6 83 51.8
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.7e-12 75.5 63 61.9
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.7e-12 75.5 63 61.9
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 6.0e-12 74.3 81 54.3
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.0e-11 73.6 62 61.3
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.3e-11 73.2 62 61.3
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.7e-11 72.8 92 45.7
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.7e-11 72.8 82 50.0
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 3.0e-11 72.0 62 59.7
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 3.0e-11 72.0 62 59.7
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 3.0e-11 72.0 78 50.0
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 3.9e-11 71.6 62 59.7
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 3.9e-11 71.6 62 59.7
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 3.9e-11 71.6 62 59.7
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 5.1e-11 71.2 62 59.7
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 5.1e-11 71.2 62 59.7
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.1e-10 70.1 62 58.1
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.1e-10 70.1 67 56.7
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 2.5e-10 68.9 62 56.5
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.5e-10 68.9 62 58.1
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.5e-10 68.9 79 45.6
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 4.3e-10 68.2 90 44.4
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 5.6e-10 67.8 79 44.3
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 7.3e-10 67.4 87 44.8
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 9.6e-10 67.0 62 54.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 2.1e-09 65.9 60 55.0
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 6.2e-09 64.3 78 44.9
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.8e-08 62.8 85 41.2
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.1e-08 62.0 66 51.5
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.0e-08 61.6 86 43.0
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 6.9e-08 60.8 68 45.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 9.0e-08 60.5 62 50.0
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 9.0e-08 60.5 62 50.0
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 9.0e-08 60.5 62 50.0
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 9.0e-08 60.5 62 50.0
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.0e-08 60.5 56 58.9
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.5e-07 59.7 62 50.0
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 2.6e-07 58.9 79 41.8
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.6e-07 58.9 61 45.9
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 4.5e-07 58.2 50 58.0
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.7e-06 56.2 55 58.2
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 4.9e-06 54.7 66 47.0


User provided reference genes

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