Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv01179 Davidia involucrata HOM05D001514 ORTHO05D002956 4.3e-36 154.1 75 100.0
Dinv26434 Davidia involucrata HOM05D001514 ORTHO05D002956 4.3e-36 154.1 75 100.0
Dinv34358 Davidia involucrata HOM05D001514 ORTHO05D002956 1.8e-21 105.5 64 81.2
Dinv42376 Davidia involucrata HOM05D001514 ORTHO05D005209 2.2e-19 98.6 72 66.7
vmacro07772 Vaccinium macrocarpon HOM05D001514 ORTHO05D002956 2.2e-16 88.6 72 61.1
Lju926A2T24 Lonicera japonica HOM05D001514 ORTHO05D002956 1.1e-15 86.3 72 56.9
Rhsim01G0044200 Rhododendron simsii HOM05D001514 ORTHO05D002956 7.2e-15 83.6 72 58.3
Lj7A685G50 Lonicera japonica HOM05D001514 ORTHO05D002956 1.2e-14 82.8 72 55.6
Rhsim03G0229300 Rhododendron simsii HOM05D001514 ORTHO05D002956 3.6e-14 81.3 72 58.3
CSS0033186 Camellia sinensis var. sinensis HOM05D001514 ORTHO05D002956 1.8e-13 79.0 64 59.4
Cc06_g12010 Coffea canephora HOM05D001514 ORTHO05D002956 2.0e-12 75.5 72 54.2
DCAR_028287 Daucus carota HOM05D001514 ORTHO05D002956 2.0e-12 75.5 72 51.4
Gohir.D05G034700 Gossypium hirsutum HOM05D001514 ORTHO05D002956 4.4e-12 74.3 64 53.1
Duzib150G1196 Durio zibethinus HOM05D001514 ORTHO05D002956 7.5e-12 73.6 62 53.2
Cpa.g.sc280.4 Carica papaya HOM05D001514 ORTHO05D002956 9.7e-12 73.2 64 50.0
Potri.005G126700 Populus trichocarpa HOM05D001514 ORTHO05D002956 9.7e-12 73.2 72 50.0
Potri.006G143500 Populus trichocarpa HOM05D001514 ORTHO05D002956 9.7e-12 73.2 72 50.0
QL11p000453 Quercus lobata HOM05D001514 ORTHO05D002956 9.7e-12 73.2 72 51.4
Eucgr.C03553 Eucalyptus grandis HOM05D001514 ORTHO05D002956 1.7e-11 72.4 70 54.3
Actinidia29921 Actinidia chinensis HOM05D001514 ORTHO05D002956 2.2e-11 72.0 64 56.2
Migut.J00938 Erythranthe guttata HOM05D001514 ORTHO05D002956 2.2e-11 72.0 73 52.1
Aqoxy7G00823 Aquilegia oxysepala HOM05D001514 ORTHO05D002956 2.8e-11 71.6 72 51.4
Nn6g33887 Nelumbo nucifera HOM05D001514 ORTHO05D002956 2.8e-11 71.6 72 47.2
Gohir.A05G033200 Gossypium hirsutum HOM05D001514 ORTHO05D002956 3.7e-11 71.2 64 51.6
TAR636G3650 Trochodendron aralioides HOM05D001514 ORTHO05D002956 3.7e-11 71.2 72 48.6
Hma1.2p1_0928F.1_g237720 Hydrangea macrophylla HOM05D001514 ORTHO05D002956 1.1e-10 69.7 72 48.6
PGSC0003DMG400010931 Solanum tuberosum HOM05D001514 ORTHO05D002956 1.8e-10 68.9 64 53.1
Thecc.09G079200 Theobroma cacao HOM05D001514 ORTHO05D002956 2.4e-10 68.6 72 48.6
Gorai.009G035100 Gossypium raimondii HOM05D001514 ORTHO05D002956 3.1e-10 68.2 64 50.0
MSTRG.19469 Avicennia marina HOM05D001514 ORTHO05D002956 4.1e-10 67.8 72 45.8
Sc08g0008830 Simmondsia chinensis HOM05D001514 ORTHO05D002956 4.1e-10 67.8 71 50.7
Sc08g0009320 Simmondsia chinensis HOM05D001514 ORTHO05D002956 4.1e-10 67.8 71 50.7
TAR374G0149 Trochodendron aralioides HOM05D001514 ORTHO05D002956 4.1e-10 67.8 69 49.3
ECA238G0042 Erigeron canadensis HOM05D001514 ORTHO05D002956 5.3e-10 67.4 60 58.3
Prupe.7G201300 Prunus persica HOM05D001514 ORTHO05D002956 5.3e-10 67.4 64 48.4
Sabra06G0112400 Salix brachista HOM05D001514 ORTHO05D002956 5.3e-10 67.4 73 47.9
Haze_25984 Corylus avellana HOM05D001514 ORTHO05D002956 7.0e-10 67.0 69 46.4
Haze_25992 Corylus avellana HOM05D001514 ORTHO05D002956 7.0e-10 67.0 69 46.4
COL.COLO4_18113 Corchorus olitorius HOM05D001514 ORTHO05D002956 9.1e-10 66.6 64 53.1
PSO210G5997 Papaver somniferum HOM05D001514 ORTHO05D002956 9.1e-10 66.6 64 46.9
Sopen05g020390 Solanum pennellii HOM05D001514 ORTHO05D002956 9.1e-10 66.6 64 51.6
ClCG03G015210 Citrullus lanatus HOM05D001514 ORTHO05D002956 1.2e-09 66.2 60 55.0
TWI32G1203 Tripterygium wilfordii HOM05D001514 ORTHO05D002956 1.2e-09 66.2 70 47.1
Aqoxy7G03922 Aquilegia oxysepala HOM05D001514 ORTHO05D002956 1.6e-09 65.9 64 51.6
CiPaw.03G207900 Carya illinoinensis HOM05D001514 ORTHO05D002956 2.0e-09 65.5 64 48.4
PSO386G0256 Papaver somniferum HOM05D001514 ORTHO05D002956 2.7e-09 65.1 64 45.3
Peaxi162Scf00724g00710 Petunia axillaris HOM05D001514 ORTHO05D002956 2.7e-09 65.1 72 47.2
CsaV3_1G040840 Cucumis sativus L. HOM05D001514 ORTHO05D002956 3.5e-09 64.7 62 51.6
THA.LOC104808893 Tarenaya hassleriana HOM05D001514 ORTHO05D002956 4.5e-09 64.3 62 54.8
CiPaw.11G050400 Carya illinoinensis HOM05D001514 ORTHO05D002956 5.9e-09 63.9 72 43.1
Nn6g31659 Nelumbo nucifera HOM05D001514 ORTHO05D002956 5.9e-09 63.9 64 46.9
CAN.G1156.43 Capsicum annuum HOM05D001514 ORTHO05D002956 7.7e-09 63.5 64 51.6
MD02G1088300 Malus domestica HOM05D001514 ORTHO05D002956 7.7e-09 63.5 64 46.9
Solyc05g025650.3 Solanum lycopersicum HOM05D001514 ORTHO05D002956 7.7e-09 63.5 64 50.0
Manes.03G039301 Manihot esculenta HOM05D001514 ORTHO05D002956 1.3e-08 62.8 70 47.1
MELO3C029297.2 Cucumis melo HOM05D001514 ORTHO05D002956 1.7e-08 62.4 62 50.0
QL02p025702 Quercus lobata HOM05D001514 ORTHO05D002956 1.7e-08 62.4 72 41.7
Glyma.13G109200 Glycine max HOM05D001514 ORTHO05D002956 2.2e-08 62.0 64 48.4
arahy.Tifrunner.gnm1.ann1.QP9L9J Arachis hypogaea HOM05D001514 ORTHO05D002956 2.9e-08 61.6 61 50.8
Haze_21281 Corylus avellana HOM05D001514 ORTHO05D002956 2.9e-08 61.6 64 43.8
Duzib205G1237 Durio zibethinus HOM05D001514 ORTHO05D002956 2.9e-08 61.6 72 43.1
Glyma.17G050400 Glycine max HOM05D001514 ORTHO05D002956 2.9e-08 61.6 64 48.4
MD07G1251400 Malus domestica HOM05D001514 ORTHO05D002956 2.9e-08 61.6 60 51.7
Nn4g25055 Nelumbo nucifera HOM05D001514 ORTHO05D002956 2.9e-08 61.6 64 45.3
TAR352G0002 Trochodendron aralioides HOM05D001514 ORTHO05D002956 2.9e-08 61.6 72 41.7
EL10Ac8g19108 Beta vulgaris HOM05D001514 ORTHO05D002956 3.8e-08 61.2 64 45.3
Cfa012924 Carpinus fangiana HOM05D001514 ORTHO05D002956 3.8e-08 61.2 64 43.8
AUR62025187 Chenopodium quinoa HOM05D001514 ORTHO05D002956 3.8e-08 61.2 70 47.1
Manes.14G037500 Manihot esculenta HOM05D001514 ORTHO05D002956 3.8e-08 61.2 60 50.0
PGR044G0393 Punica granatum HOM05D001514 ORTHO05D002956 3.8e-08 61.2 72 45.8
FvH4_7g27240 Fragaria vesca HOM05D001514 ORTHO05D002956 5.0e-08 60.8 72 43.1
FAN06G3049 Fragaria x ananassa HOM05D001514 ORTHO05D002956 5.0e-08 60.8 72 43.1
FAN06G4847 Fragaria x ananassa HOM05D001514 ORTHO05D002956 5.0e-08 60.8 72 43.1
RcHm_v2.0_Chr2g0094511 Rosa chinensis HOM05D001514 ORTHO05D002956 5.0e-08 60.8 50 62.0
SHI23798 Sapria himalayana HOM05D001514 ORTHO05D002956 5.0e-08 60.8 43 62.8
TWI34G1862 Tripterygium wilfordii HOM05D001514 ORTHO05D002956 5.0e-08 60.8 72 44.4
Thecc.03G152800 Theobroma cacao HOM05D001514 ORTHO05D002956 1.1e-07 59.7 72 41.7
GSVIVG01015098001 Vitis vinifera HOM05D001514 ORTHO05D002956 1.1e-07 59.7 72 47.2
arahy.Tifrunner.gnm1.ann1.3ELC0K Arachis hypogaea HOM05D001514 ORTHO05D002956 1.5e-07 59.3 58 55.2
arahy.Tifrunner.gnm1.ann1.BNM70H Arachis hypogaea HOM05D001514 ORTHO05D002956 1.5e-07 59.3 61 49.2
FvH4_1g08400 Fragaria vesca HOM05D001514 ORTHO05D002956 1.5e-07 59.3 64 48.4
FAN19G2247 Fragaria x ananassa HOM05D001514 ORTHO05D002956 1.5e-07 59.3 64 48.4
FAN23G2728 Fragaria x ananassa HOM05D001514 ORTHO05D002956 1.5e-07 59.3 64 48.4
Gohir.A13G191400 Gossypium hirsutum HOM05D001514 ORTHO05D002956 1.5e-07 59.3 56 57.1
AUR62028987 Chenopodium quinoa HOM05D001514 ORTHO05D002956 1.9e-07 58.9 70 44.3
FAN01G0329 Fragaria x ananassa HOM05D001514 ORTHO05D002956 1.9e-07 58.9 72 40.3
Gohir.D13G196800 Gossypium hirsutum HOM05D001514 ORTHO05D002956 1.9e-07 58.9 35 74.3
Gorai.013G225500 Gossypium raimondii HOM05D001514 ORTHO05D002956 1.9e-07 58.9 35 74.3
arahy.Tifrunner.gnm1.ann1.K25QHH Arachis hypogaea HOM05D001514 ORTHO05D002956 2.5e-07 58.5 58 55.2
FAN03G0948 Fragaria x ananassa HOM05D001514 ORTHO05D002956 2.5e-07 58.5 72 40.3
Hund08727 Selenicereus undatus HOM05D001514 ORTHO05D002956 2.5e-07 58.5 69 39.1
SGA_v2.0_scaffold97G29141 Striga asiatica HOM05D001514 ORTHO05D002956 2.5e-07 58.5 64 43.8
CANSAT80G0667 Cannabis sativa HOM05D001514 ORTHO05D002956 3.2e-07 58.2 72 41.7
Nitab4.5_0000024g0160 Nicotiana tabacum HOM05D001514 ORTHO05D002956 3.2e-07 58.2 72 47.2
Prupe.2G275200 Prunus persica HOM05D001514 ORTHO05D002956 3.2e-07 58.2 64 43.8
VMungo0251G2131 Vigna mungo HOM05D001514 ORTHO05D002956 3.2e-07 58.2 65 46.2
Atru.chr7.1691 Acer truncatum HOM05D001514 ORTHO05D002956 4.2e-07 57.8 64 50.0
FAN10G3530 Fragaria x ananassa HOM05D001514 ORTHO05D002956 4.2e-07 57.8 72 40.3
Nitab4.5_0002623g0040 Nicotiana tabacum HOM05D001514 ORTHO05D002956 4.2e-07 57.8 64 50.0
arahy.Tifrunner.gnm1.ann1.H2PW5T Arachis hypogaea HOM05D001514 ORTHO05D002956 5.5e-07 57.4 63 47.6
Ciclev10012311m.g Citrus clementina HOM05D001514 ORTHO05D002956 5.5e-07 57.4 68 44.1
MBI19_g26576_MAGBIO Magnolia biondii HOM05D001514 ORTHO05D002956 5.5e-07 57.4 86 36.0
FAN28G0900 Fragaria x ananassa HOM05D001514 ORTHO05D002956 9.4e-07 56.6 64 46.9
Lalb_Chr13g0299511 Lupinus albus HOM05D001514 ORTHO05D002956 9.4e-07 56.6 61 50.8
AUR62012000 Chenopodium quinoa HOM05D001514 ORTHO05D002956 1.2e-06 56.2 70 42.9
MD01G1181300 Malus domestica HOM05D001514 ORTHO05D002956 1.2e-06 56.2 68 42.6
Oeu021699.1 Olea europaea HOM05D001514 ORTHO05D002956 1.6e-06 55.8 35 65.7
SalBow6G3192 Salvia bowleyana HOM05D001514 ORTHO05D002956 1.6e-06 55.8 64 43.8
AUR62002228 Chenopodium quinoa HOM05D001514 ORTHO05D002956 2.1e-06 55.5 40 60.0
COL.COLO4_14094 Corchorus olitorius HOM05D001514 ORTHO05D002956 2.1e-06 55.5 64 40.6
TWI14G0682 Tripterygium wilfordii HOM05D001514 ORTHO05D002956 2.1e-06 55.5 72 41.7
AUR62015439 Chenopodium quinoa HOM05D001514 ORTHO05D002956 2.7e-06 55.1 77 37.7
Dinv02511 Davidia involucrata HOM05D001514 ORTHO05D185462 2.7e-06 55.1 75 45.3
Dinv16849 Davidia involucrata HOM05D002053 ORTHO05D002135 3.6e-06 54.7 43 55.8
Thhalv10002636m.g Eutrema salsugineum HOM05D001514 ORTHO05D002956 4.7e-06 54.3 63 46.0
RcHm_v2.0_Chr1g0374021 Rosa chinensis HOM05D001514 ORTHO05D002956 4.7e-06 54.3 72 37.5
Gohir.D07G046600 Gossypium hirsutum HOM05D001514 ORTHO05D002956 6.1e-06 53.9 69 39.1
Phvul.003G132000 Phaseolus vulgaris HOM05D001514 ORTHO05D002956 6.1e-06 53.9 58 48.3
MSTRG.8833 Avicennia marina HOM05D001514 ORTHO05D002956 8.0e-06 53.5 35 62.9
Cpa.g.sc13.283 Carica papaya HOM05D001514 ORTHO05D002956 8.0e-06 53.5 35 62.9
Cc07_g19460 Coffea canephora HOM05D001514 ORTHO05D002956 8.0e-06 53.5 51 54.9
Gorai.001G049700 Gossypium raimondii HOM05D001514 ORTHO05D002956 8.0e-06 53.5 69 39.1
SGA_v2.0_scaffold44G16557 Striga asiatica HOM05D001514 ORTHO05D002956 8.0e-06 53.5 35 65.7


User provided reference genes

Program Settings