Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 3.2e-147 525.0 254 100.0
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 1.3e-60 237.3 319 44.5
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 2.7e-53 213.0 311 43.7
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 2.3e-52 209.9 315 41.6
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 3.0e-52 209.5 312 41.7
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 6.6e-52 208.4 312 41.3
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 1.5e-51 207.2 313 42.8
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 1.5e-51 207.2 313 42.8
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.9e-51 206.8 314 41.4
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 1.9e-51 206.8 314 41.4
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 3.3e-51 206.1 316 40.2
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 3.3e-51 206.1 314 40.8
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 5.6e-51 205.3 313 41.2
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 1.2e-50 204.1 313 42.2
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 2.1e-50 203.4 314 41.1
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 3.6e-50 202.6 313 40.9
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 1.0e-49 201.1 317 41.6
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 1.4e-49 200.7 314 40.4
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.0e-49 199.1 336 40.5
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 5.2e-49 198.7 317 40.1
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 5.2e-49 198.7 319 38.9
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 2.6e-48 196.4 310 39.4
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 3.4e-48 196.1 300 39.0
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 4.4e-48 195.7 306 39.5
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 4.4e-48 195.7 317 39.4
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 5.8e-48 195.3 303 40.9
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 7.5e-48 194.9 317 40.1
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 9.8e-48 194.5 312 38.8
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 9.8e-48 194.5 319 37.6
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 1.7e-47 193.7 308 38.6
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 1.7e-47 193.7 314 40.4
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 2.2e-47 193.4 317 39.1
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 2.9e-47 193.0 315 39.0
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 3.7e-47 192.6 314 40.1
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 3.7e-47 192.6 313 39.6
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 3.7e-47 192.6 318 39.6
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 3.7e-47 192.6 303 40.3
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 1.1e-46 191.0 302 40.7
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 1.1e-46 191.0 316 38.3
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 1.4e-46 190.7 313 39.6
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 1.9e-46 190.3 311 40.2
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 2.4e-46 189.9 314 40.1
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 2.4e-46 189.9 320 39.1
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 3.2e-46 189.5 309 37.9
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 4.1e-46 189.1 316 38.9
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 1.2e-45 187.6 308 39.0
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 1.2e-45 187.6 301 39.9
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 1.2e-45 187.6 315 37.8
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 1.6e-45 187.2 316 36.1
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 1.6e-45 187.2 314 38.9
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 2.0e-45 186.8 316 38.9
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 3.5e-45 186.0 317 36.9
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 3.5e-45 186.0 313 39.0
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 7.8e-45 184.9 312 40.7
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 1.0e-44 184.5 317 38.2
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 1.0e-44 184.5 317 38.2
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 1.3e-44 184.1 309 40.1
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.7e-44 183.7 309 39.2
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 2.3e-44 183.3 315 39.0
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 1.9e-43 180.3 316 37.3
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 1.9e-43 180.3 303 36.3
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 2.5e-43 179.9 304 36.8
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 7.3e-43 178.3 308 37.3
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 1.2e-42 177.6 330 36.4
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 1.6e-42 177.2 319 36.1
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 2.8e-42 176.4 308 36.7
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.8e-42 176.4 288 39.9
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 4.7e-42 175.6 318 35.5
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 1.1e-41 174.5 333 36.0
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 1.1e-41 174.5 307 35.2
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.1e-41 174.5 279 39.8
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 1.4e-41 174.1 315 37.5
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 3.1e-41 172.9 328 34.8
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 4.0e-41 172.6 307 35.5
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.5e-40 170.6 300 37.7
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 1.5e-40 170.6 315 33.0
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 1.5e-40 170.6 333 37.8
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 2.0e-40 170.2 332 35.8
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 3.4e-40 169.5 332 36.7
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.4e-40 169.5 266 37.6
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 3.4e-40 169.5 297 41.1
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 4.4e-40 169.1 304 33.6
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 7.5e-40 168.3 297 35.7
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 9.8e-40 167.9 262 37.8
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 2.2e-39 166.8 276 38.0
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 1.1e-38 164.5 306 35.6
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 1.1e-38 164.5 302 34.1
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 1.4e-38 164.1 309 36.6
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 1.9e-38 163.7 308 33.4
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 2.4e-38 163.3 308 33.4
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 5.4e-38 162.2 317 33.8
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 5.4e-38 162.2 315 36.2
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 7.1e-38 161.8 314 33.4
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 9.2e-38 161.4 307 35.8
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 9.2e-38 161.4 318 33.6
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 1.2e-37 161.0 303 32.3
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 1.6e-37 160.6 307 32.9
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 1.6e-37 160.6 307 32.9
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.1e-37 160.2 330 32.7
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 2.7e-37 159.8 307 32.9
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 3.5e-37 159.5 306 34.3
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 3.5e-37 159.5 308 33.4
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 3.5e-37 159.5 317 34.7
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 4.6e-37 159.1 213 45.5
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 1.3e-36 157.5 301 35.9
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 2.3e-36 156.8 308 33.1
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 3.9e-36 156.0 335 34.6
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 6.6e-36 155.2 308 31.5
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 1.1e-35 154.5 282 35.1
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 1.9e-35 153.7 316 34.2
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 1.9e-35 153.7 301 35.9
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 5.6e-35 152.1 318 33.6
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.6e-35 152.1 288 34.4
Hma1.2p1_1201F.1_g266660 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 7.3e-35 151.8 302 34.4
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.2e-33 145.6 281 37.0
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.2e-33 145.6 281 37.0
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 8.9e-33 144.8 263 36.9
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 3.4e-32 142.9 323 31.3
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 5.8e-32 142.1 309 33.7
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 1.3e-31 141.0 319 32.9
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 2.2e-31 140.2 162 46.3
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 8.4e-31 138.3 325 32.3
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 1.4e-30 137.5 317 33.4
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 5.4e-30 135.6 361 31.3
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 2.8e-26 123.2 292 32.2
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 2.8e-26 123.2 269 34.6
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 4.7e-26 122.5 247 35.2
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 3.4e-24 116.3 162 41.4
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 4.4e-24 115.9 288 33.0
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.3e-23 114.4 271 31.7
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 7.1e-22 108.6 188 33.5
Prupe.3G136600 Prunus persica HOM05D004790 ORTHO05D005678 2.3e-20 103.6 140 43.6
Mapoly0001s0243 Marchantia polymorpha HOM05D004790 ORTHO05D005678 1.3e-18 97.8 186 32.3
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 8.1e-18 95.1 140 35.7
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 2.6e-16 90.1 131 39.7
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 3.2e-14 83.2 259 25.5
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 3.2e-14 83.2 62 64.5
Pp3c8_24840 Physcomitrium patens HOM05D004790 ORTHO05D005678 1.6e-13 80.9 208 31.2
SMO111G0050 Selaginella moellendorffii HOM05D004790 ORTHO05D005678 4.6e-13 79.3 183 29.0
Sabra13G0109400 Salix brachista HOM05D004790 ORTHO05D005678 6.0e-13 79.0 61 60.7
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 1.0e-12 78.2 178 29.8
Pp3c23_21860 Physcomitrium patens HOM05D004790 ORTHO05D005678 2.3e-12 77.0 195 28.2
TPR.G11082 Trifolium pratense HOM05D004790 ORTHO05D005678 2.3e-12 77.0 146 33.6
Sabra13G0113000 Salix brachista HOM05D004790 ORTHO05D005678 1.8e-09 67.4 57 50.9
Sabra13G0109000 Salix brachista HOM05D000001 ORTHO05D000424 2.4e-09 67.0 56 48.2
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 5.3e-09 65.9 81 35.8
GSVIVG01029526001 Vitis vinifera HOM05D004790 ORTHO05D005678 3.4e-08 63.2 64 48.4
FAN05G5117 Fragaria x ananassa HOM05D000001 ORTHO05D000424 2.4e-06 57.0 64 45.3
Hma1.2p1_0002F.1_g002210 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.5e-06 55.8 133 30.1


User provided reference genes

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