Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 6.4e-218 760.4 365 100.0
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.4e-172 609.8 371 78.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.1e-169 600.1 395 72.9
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.5e-166 589.7 367 78.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 5.9e-163 577.8 369 76.7
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 5.0e-162 574.7 368 74.2
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.9e-161 572.8 366 75.1
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.4e-159 566.6 369 73.7
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.6e-158 562.4 351 75.8
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 3.7e-157 558.5 363 73.3
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 1.0e-154 550.4 352 74.7
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.0e-154 550.4 352 74.7
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.3e-154 550.1 366 72.4
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.3e-154 550.1 368 72.3
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.9e-153 546.2 367 71.7
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 3.3e-153 545.4 350 73.7
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 3.3e-153 545.4 367 71.4
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 3.3e-153 545.4 352 72.4
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 4.3e-153 545.0 367 71.4
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.6e-152 543.1 374 69.8
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.7e-152 541.6 365 73.2
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.8e-151 537.7 365 71.5
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.2e-150 537.0 377 69.8
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 4.4e-150 535.0 357 73.7
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 5.8e-150 534.6 372 70.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 2.2e-149 532.7 368 72.3
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 2.9e-149 532.3 346 74.3
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 3.7e-149 531.9 360 71.4
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 4.9e-149 531.6 366 70.2
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 8.3e-149 530.8 358 72.1
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 5.4e-148 528.1 349 71.3
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.6e-147 526.6 366 69.1
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 7.8e-147 524.2 343 72.9
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.3e-146 522.7 348 71.3
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 5.0e-146 521.5 355 69.6
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.3e-145 518.8 374 69.3
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.3e-145 518.8 328 74.4
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 4.3e-145 518.5 350 72.0
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 5.6e-145 518.1 338 71.9
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.2e-144 516.9 332 74.1
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 3.6e-144 515.4 332 73.8
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 3.6e-144 515.4 337 71.2
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 4.7e-144 515.0 352 71.0
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.4e-143 513.5 390 66.9
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 4.0e-143 511.9 348 70.1
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 6.8e-143 511.1 352 69.3
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 3.4e-142 508.8 326 74.2
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.7e-141 505.4 363 67.2
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 8.3e-141 504.2 337 70.0
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 2.4e-140 502.7 346 68.5
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 7.1e-140 501.1 351 67.8
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 4.6e-139 498.4 333 71.2
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.7e-138 496.5 357 66.7
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 9.5e-137 490.7 326 70.6
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 4.7e-136 488.4 354 66.4
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 8.1e-136 487.6 404 60.1
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.2e-133 479.6 358 65.9
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.9e-133 479.2 354 66.4
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 3.7e-133 478.8 357 66.7
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 8.3e-133 477.6 355 66.2
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 7.1e-132 474.6 352 65.1
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.2e-131 473.8 363 64.5
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.6e-131 473.4 303 74.3
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 2.7e-131 472.6 352 65.9
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.3e-130 470.3 337 67.4
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.3e-130 470.3 360 65.6
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-130 469.5 345 66.7
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.9e-129 466.5 354 65.0
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.9e-129 466.5 354 65.3
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.9e-129 466.5 354 65.3
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 1.9e-129 466.5 334 67.7
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 5.6e-129 464.9 366 63.7
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 9.6e-129 464.2 355 65.1
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.6e-128 463.4 331 66.8
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.6e-128 463.4 337 66.5
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 2.1e-128 463.0 355 64.8
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 2.4e-127 459.5 421 57.2
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 2.2e-125 453.0 330 63.6
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.1e-123 446.4 507 49.7
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 7.8e-123 444.5 294 72.8
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.0e-122 442.6 357 61.3
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 6.6e-122 441.4 353 61.8
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.3e-120 437.2 345 63.5
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 9.0e-119 431.0 345 62.9
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 3.8e-117 425.6 336 60.4
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 2.3e-114 416.4 264 73.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 6.6e-114 414.8 262 73.3
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 4.3e-113 412.1 334 61.4
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 9.6e-113 411.0 276 68.5
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.4e-111 407.1 242 77.7
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 2.5e-105 386.3 262 70.2
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.0e-102 376.7 352 56.8
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 4.6e-99 365.5 276 64.5
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-95 354.4 334 54.8
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 5.3e-87 325.5 322 51.6
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.2e-85 320.1 239 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.8e-85 319.3 322 49.1
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 4.2e-84 315.8 367 48.0
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.0e-82 311.2 185 76.8
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.0e-74 283.1 199 67.3
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 3.0e-74 283.1 329 44.7
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.1e-60 238.0 351 39.9
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.4e-39 167.9 171 52.6
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.6e-35 154.5 103 75.7
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.9e-29 133.3 78 78.2
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.3e-28 130.2 103 65.0
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.5e-20 104.8 75 72.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.4e-15 87.4 101 48.5
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.2e-14 85.1 50 70.0
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.2e-14 85.1 59 74.6
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.7e-13 81.3 80 51.2
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-10 71.2 39 79.5
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.4e-07 61.6 47 55.3


User provided reference genes

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