Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26354 Davidia involucrata HOM05D000196 ORTHO05D000279 1.2e-127 459.9 245 100.0
Dinv26383 Davidia involucrata HOM05D000196 ORTHO05D000279 1.2e-127 459.9 245 100.0
CSS0024071 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 9.3e-96 354.0 245 78.0
CSS0043810 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 7.9e-95 350.9 245 77.6
Actinidia12399 Actinidia chinensis HOM05D000196 ORTHO05D000279 5.3e-91 338.2 247 74.1
CSS0010394 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 1.1e-88 330.5 222 75.2
Actinidia36620 Actinidia chinensis HOM05D000196 ORTHO05D000279 2.7e-87 325.9 247 68.8
Rhsim09G0089000 Rhododendron simsii HOM05D000196 ORTHO05D000279 1.1e-83 313.9 245 67.8
Ciclev10014527m.g Citrus clementina HOM05D000196 ORTHO05D000279 1.3e-81 307.0 245 68.2
Manes.17G084600 Manihot esculenta HOM05D000196 ORTHO05D000279 4.2e-80 302.0 245 65.7
Atru.chr11.908 Acer truncatum HOM05D000196 ORTHO05D000279 1.4e-78 297.0 223 69.5
CSS0042562 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 1.8e-78 296.6 201 74.6
Haze_10868 Corylus avellana HOM05D000196 ORTHO05D000279 5.2e-78 295.0 223 69.5
QL03p036146 Quercus lobata HOM05D000196 ORTHO05D000279 5.7e-77 291.6 221 69.2
Cfa015030 Carpinus fangiana HOM05D000196 ORTHO05D000279 5.3e-75 285.0 223 66.8
Sabra10G0077400 Salix brachista HOM05D000196 ORTHO05D000279 7.7e-74 281.2 247 66.0
Manes.15G135000 Manihot esculenta HOM05D000196 ORTHO05D000279 3.2e-72 275.8 245 60.4
Prupe.1G334200 Prunus persica HOM05D000196 ORTHO05D000279 4.2e-72 275.4 245 61.6
Potri.010G105600 Populus trichocarpa HOM05D000196 ORTHO05D000279 5.5e-72 275.0 247 63.2
CiPaw.06G053100 Carya illinoinensis HOM05D000196 ORTHO05D000279 8.0e-71 271.2 246 64.6
Sabra08G0103500 Salix brachista HOM05D000196 ORTHO05D000279 3.0e-70 269.2 224 66.5
Duzib251G0540 Durio zibethinus HOM05D000196 ORTHO05D000279 4.0e-70 268.9 246 58.1
TAR371G0633 Trochodendron aralioides HOM05D000196 ORTHO05D000279 2.6e-69 266.2 245 58.8
COL.COLO4_16609 Corchorus olitorius HOM05D000196 ORTHO05D000279 1.1e-67 260.8 210 62.9
Thecc.02G294100 Theobroma cacao HOM05D000196 ORTHO05D000279 1.8e-67 260.0 247 60.3
TAR629G2583 Trochodendron aralioides HOM05D000196 ORTHO05D000279 3.1e-67 259.2 220 60.9
Potri.008G135500 Populus trichocarpa HOM05D000196 ORTHO05D000279 1.6e-66 256.9 229 63.8
Duzib268G0379 Durio zibethinus HOM05D000196 ORTHO05D000279 5.9e-66 255.0 245 55.9
Gorai.005G156900 Gossypium raimondii HOM05D000196 ORTHO05D000279 3.8e-65 252.3 246 55.3
Gohir.D02G139900 Gossypium hirsutum HOM05D000196 ORTHO05D000279 5.0e-65 251.9 246 55.3
MD13G1019800 Malus domestica HOM05D000196 ORTHO05D000279 8.5e-65 251.1 245 56.7
Gohir.A03G118000 Gossypium hirsutum HOM05D000196 ORTHO05D000279 7.2e-64 248.1 246 54.5
TWI74G1239 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 7.2e-64 248.1 246 53.7
Cc11_g07720 Coffea canephora HOM05D000196 ORTHO05D000279 2.7e-63 246.1 245 56.7
Lj6C736G18 Lonicera japonica HOM05D000196 ORTHO05D000279 4.0e-62 242.3 246 55.3
MBI13_g24904_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 4.4e-61 238.8 225 56.4
MD16G1017900 Malus domestica HOM05D000196 ORTHO05D000279 1.3e-60 237.3 241 56.4
RcHm_v2.0_Chr4g0442781 Rosa chinensis HOM05D000196 ORTHO05D000279 3.7e-60 235.7 246 58.1
Cpa.g.sc2.186 Carica papaya HOM05D000196 ORTHO05D000279 1.7e-57 226.9 245 55.5
Nitab4.5_0002803g0020 Nicotiana tabacum HOM05D000196 ORTHO05D000279 3.8e-57 225.7 246 57.7
Nitab4.5_0000916g0020 Nicotiana tabacum HOM05D000196 ORTHO05D000279 3.2e-56 222.6 245 58.0
FAN17G1586 Fragaria x ananassa HOM05D000196 ORTHO05D000279 2.8e-55 219.5 245 53.1
MBI19_g41132_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 8.8e-54 214.5 242 47.9
DCAR_002677 Daucus carota HOM05D000196 ORTHO05D000279 4.4e-53 212.2 216 57.9
Thecc.02G294300 Theobroma cacao HOM05D000196 ORTHO05D000279 4.4e-53 212.2 247 49.0
FvH4_4g33470 Fragaria vesca HOM05D000196 ORTHO05D000279 1.3e-52 210.7 245 51.8
FAN12G0718 Fragaria x ananassa HOM05D000196 ORTHO05D000279 1.3e-52 210.7 245 51.8
FAN22G2165 Fragaria x ananassa HOM05D000196 ORTHO05D000279 1.3e-52 210.7 245 51.8
Eucgr.G02094 Eucalyptus grandis HOM05D000196 ORTHO05D000279 2.8e-52 209.5 223 52.0
FAN07G0830 Fragaria x ananassa HOM05D000196 ORTHO05D000279 1.8e-51 206.8 245 51.4
FAN07G2715 Fragaria x ananassa HOM05D000196 ORTHO05D000279 1.8e-51 206.8 245 51.4
Sopen04g003200 Solanum pennellii HOM05D000196 ORTHO05D000279 5.4e-51 205.3 245 52.2
Aqoxy3G00009 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.3e-49 200.7 245 49.4
SalBow2G3592 Salvia bowleyana HOM05D000196 ORTHO05D000279 3.8e-49 199.1 244 50.4
PGSC0003DMG400029514 Solanum tuberosum HOM05D000196 ORTHO05D000279 7.3e-48 194.9 218 55.0
Solyc04g008050.4 Solanum lycopersicum HOM05D000196 ORTHO05D000279 8.0e-47 191.4 242 50.4
Glyma.02G085900 Glycine max HOM05D000196 ORTHO05D000279 3.0e-46 189.5 245 51.4
Glyma.07G171200 Glycine max HOM05D000196 ORTHO05D000279 1.2e-45 187.6 223 49.8
PSO478G0335 Papaver somniferum HOM05D000196 ORTHO05D000279 1.5e-45 187.2 251 47.4
Phvul.003G017000 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 1.1e-43 181.0 255 47.8
PSO017G1281 Papaver somniferum HOM05D000196 ORTHO05D000279 5.4e-43 178.7 228 47.4
MSTRG.2122 Avicennia marina HOM05D000196 ORTHO05D000279 4.6e-42 175.6 245 46.1
VMungo1215G0986 Vigna mungo HOM05D000196 ORTHO05D000279 6.6e-41 171.8 252 48.8
CAN.G74.17 Capsicum annuum HOM05D000196 ORTHO05D000279 1.5e-40 170.6 223 51.6
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.3e-36 157.5 86 89.5
Thecc.02G294500 Theobroma cacao HOM05D000196 ORTHO05D000279 2.9e-36 156.4 195 47.2
Psat6g046000 Pisum sativum HOM05D000196 ORTHO05D000279 2.4e-35 153.3 243 42.8
Medtr1g032570 Medicago truncatula HOM05D000196 ORTHO05D000279 2.3e-33 146.7 244 43.9
ECA233G1665 Erigeron canadensis HOM05D000196 ORTHO05D000279 6.6e-33 145.2 217 47.5
Actinidia34040 Actinidia chinensis HOM05D000196 ORTHO05D000279 2.8e-31 139.8 190 53.2
Peaxi162Scf00337g00718 Petunia axillaris HOM05D000196 ORTHO05D000279 6.2e-31 138.7 159 55.3
TPR.G36946 Trifolium pratense HOM05D000196 ORTHO05D000279 4.0e-30 136.0 239 43.5
Actinidia38437 Actinidia chinensis HOM05D000196 ORTHO05D000279 5.2e-30 135.6 130 61.5
Ca_12530_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 1.1e-27 127.9 243 41.6
Ca_12535_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 1.1e-27 127.9 243 41.6
CDE05G0203 Ceratophyllum demersum HOM05D000331 ORTHO05D000279 1.1e-24 117.9 226 40.7
Migut.E00489 Erythranthe guttata HOM05D000196 ORTHO05D000279 3.3e-24 116.3 240 40.4
Lj2g0000841 Lotus japonicus HOM05D000196 ORTHO05D000279 2.4e-22 110.2 207 37.2
Lj2g0025525 Lotus japonicus HOM05D000196 ORTHO05D000279 3.1e-22 109.8 207 36.7
Lj2g0024449 Lotus japonicus HOM05D000196 ORTHO05D000279 5.2e-22 109.0 216 36.1
HanXRQChr12g0364951 Helianthus annuus HOM05D000196 ORTHO05D000279 4.4e-21 105.9 242 38.8
HPP92_020308 Vanilla planifolia HOM05D000196 ORTHO05D000279 4.4e-21 105.9 218 36.2
HPP92_023445 Vanilla planifolia HOM05D043940 ORTHO05D051567 5.4e-19 99.0 168 39.9
Lj2g0001554 Lotus japonicus HOM05D000196 ORTHO05D000279 4.7e-15 85.9 216 31.5
Lsat_1_v5_gn_8_35440 Lactuca sativa HOM05D000196 ORTHO05D000279 2.6e-13 80.1 91 54.9
HPP92_023465 Vanilla planifolia HOM05D043940 ORTHO05D051567 2.2e-12 77.0 132 39.4
THA.LOC104823648 Tarenaya hassleriana HOM05D000196 ORTHO05D000279 1.1e-11 74.7 228 32.0
unitig_62.g23747 Utricularia gibba HOM05D000196 ORTHO05D000279 1.2e-10 71.2 233 32.2
CDE05G3132 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 1.3e-09 67.8 163 39.3
ATR0118G029 Amborella trichopoda HOM05D000196 ORTHO05D000279 4.3e-08 62.8 263 31.6
Zm00001eb399830 Zea mays HOM05D000196 ORTHO05D000279 9.6e-08 61.6 159 35.2
Os03g0224200 Oryza sativa ssp. japonica HOM05D000196 ORTHO05D000279 8.1e-07 58.5 175 34.9
Zm00001eb009140 Zea mays HOM05D000196 ORTHO05D000279 5.3e-06 55.8 172 31.4


User provided reference genes

Program Settings