Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26353 Davidia involucrata HOM05D002128 ORTHO05D180990 1.1e-60 236.5 129 100.0
CAN.G282.129 Capsicum annuum HOM05D002128 ORTHO05D002497 7.0e-10 67.8 62 54.8
PGSC0003DMG400019971 Solanum tuberosum HOM05D002128 ORTHO05D002497 7.0e-10 67.8 62 54.8
CSS0039115 Camellia sinensis var. sinensis HOM05D002128 ORTHO05D002497 9.2e-10 67.4 57 59.6
CSS0041619 Camellia sinensis var. sinensis HOM05D002128 ORTHO05D002497 9.2e-10 67.4 57 59.6
Lj6A737G47 Lonicera japonica HOM05D002128 ORTHO05D002497 9.2e-10 67.4 57 59.6
Nitab4.5_0000198g0120 Nicotiana tabacum HOM05D002128 ORTHO05D002497 9.2e-10 67.4 62 53.2
Nitab4.5_0000640g0140 Nicotiana tabacum HOM05D002128 ORTHO05D002497 9.2e-10 67.4 62 53.2
Peaxi162Scf00655g00114 Petunia axillaris HOM05D002128 ORTHO05D002497 1.6e-09 66.6 62 53.2
Cfa015028 Carpinus fangiana HOM05D002128 ORTHO05D002497 2.0e-09 66.2 57 59.6
Haze_10872 Corylus avellana HOM05D002128 ORTHO05D002497 2.0e-09 66.2 57 59.6
Dinv07720 Davidia involucrata HOM05D002128 ORTHO05D002497 2.0e-09 66.2 57 59.6
VMungo0251G1878 Vigna mungo HOM05D002128 ORTHO05D002497 2.0e-09 66.2 57 57.9
Glyma.05G239400 Glycine max HOM05D002128 ORTHO05D002497 2.7e-09 65.9 57 57.9
Glyma.08G046500 Glycine max HOM05D002128 ORTHO05D002497 2.7e-09 65.9 57 57.9
Sopen01g001320 Solanum pennellii HOM05D002128 ORTHO05D002497 2.7e-09 65.9 62 51.6
MSTRG.2123 Avicennia marina HOM05D002128 ORTHO05D002497 3.5e-09 65.5 57 57.9
ClCG07G005530 Citrullus lanatus HOM05D002128 ORTHO05D002497 3.5e-09 65.5 57 59.6
MELO3C016660.2 Cucumis melo HOM05D002128 ORTHO05D002497 3.5e-09 65.5 57 59.6
CsaV3_5G014370 Cucumis sativus L. HOM05D002128 ORTHO05D002497 3.5e-09 65.5 57 59.6
Oeu044004.1 Olea europaea HOM05D002128 ORTHO05D002497 3.5e-09 65.5 106 37.7
Oeu044005.1 Olea europaea HOM05D002128 ORTHO05D002497 3.5e-09 65.5 106 37.7
QL03p036060 Quercus lobata HOM05D002128 ORTHO05D002497 4.6e-09 65.1 57 59.6
vmacro10697 Vaccinium macrocarpon HOM05D002128 ORTHO05D002497 4.6e-09 65.1 57 56.1
Phvul.002G321800 Phaseolus vulgaris HOM05D002128 ORTHO05D002497 6.0e-09 64.7 57 56.1
Rhsim09G0089100 Rhododendron simsii HOM05D002128 ORTHO05D002497 6.0e-09 64.7 57 56.1
Thecc.02G293500 Theobroma cacao HOM05D002128 ORTHO05D002497 6.0e-09 64.7 57 56.1
TAR629G2952 Trochodendron aralioides HOM05D002128 ORTHO05D002497 6.0e-09 64.7 57 56.1
arahy.Tifrunner.gnm1.ann1.U9EWE2 Arachis hypogaea HOM05D002128 ORTHO05D002497 7.8e-09 64.3 57 56.1
Ciclev10014570m.g Citrus clementina HOM05D002128 ORTHO05D002497 7.8e-09 64.3 57 56.1
DCAR_026805 Daucus carota HOM05D002128 ORTHO05D002497 7.8e-09 64.3 38 76.3
Manes.15G134900 Manihot esculenta HOM05D002128 ORTHO05D002497 7.8e-09 64.3 57 56.1
Aa31LG5G16900 Aethionema arabicum HOM05D002128 ORTHO05D002497 1.3e-08 63.5 38 78.9
COL.COLO4_16603 Corchorus olitorius HOM05D002128 ORTHO05D002497 1.3e-08 63.5 57 56.1
Actinidia12398 Actinidia chinensis HOM05D002128 ORTHO05D002497 1.7e-08 63.2 57 56.1
Actinidia36621 Actinidia chinensis HOM05D002128 ORTHO05D002497 1.7e-08 63.2 57 56.1
CANSAT01G1594 Cannabis sativa HOM05D002128 ORTHO05D002497 1.7e-08 63.2 57 56.1
Gohir.D12G155900 Gossypium hirsutum HOM05D002128 ORTHO05D002497 1.7e-08 63.2 57 52.6
Gorai.008G168500 Gossypium raimondii HOM05D002128 ORTHO05D002497 1.7e-08 63.2 57 52.6
Gohir.A12G152400 Gossypium hirsutum HOM05D002128 ORTHO05D002497 2.3e-08 62.8 57 50.9
Gorai.002G166800 Gossypium raimondii HOM05D002128 ORTHO05D002497 2.3e-08 62.8 57 54.4
TWI53G1399 Tripterygium wilfordii HOM05D002128 ORTHO05D002497 3.0e-08 62.4 38 76.3
TWI74G0110 Tripterygium wilfordii HOM05D002128 ORTHO05D002497 3.0e-08 62.4 38 76.3
Atru.chr11.911 Acer truncatum HOM05D002128 ORTHO05D002497 3.9e-08 62.0 57 54.4
arahy.Tifrunner.gnm1.ann1.SPD1GG Arachis hypogaea HOM05D002128 ORTHO05D002497 3.9e-08 62.0 57 54.4
Sabra08G0103200 Salix brachista HOM05D002128 ORTHO05D002497 3.9e-08 62.0 57 56.1
Medtr8g105590 Medicago truncatula HOM05D002128 ORTHO05D002497 5.0e-08 61.6 57 54.4
Potri.010G105700 Populus trichocarpa HOM05D002128 ORTHO05D002497 5.0e-08 61.6 57 56.1
CiPaw.06G052600 Carya illinoinensis HOM05D002128 ORTHO05D002497 6.6e-08 61.2 57 56.1
Ca_17271_v3 Cicer arietinum L. HOM05D002128 ORTHO05D002497 6.6e-08 61.2 61 57.4
Cc11_g07690 Coffea canephora HOM05D002128 ORTHO05D002497 6.6e-08 61.2 52 61.5
MD16G1018000 Malus domestica HOM05D002128 ORTHO05D002497 6.6e-08 61.2 38 76.3
Prupe.1G334000 Prunus persica HOM05D002128 ORTHO05D002497 6.6e-08 61.2 38 76.3
Sed0017825 Sechium edule HOM05D002128 ORTHO05D002497 8.6e-08 60.8 57 52.6
Duzib268G0842 Durio zibethinus HOM05D002128 ORTHO05D002497 1.1e-07 60.5 57 54.4
Psat7g007600 Pisum sativum HOM05D002128 ORTHO05D002497 1.1e-07 60.5 57 52.6
TPR.G19241 Trifolium pratense HOM05D002128 ORTHO05D002497 1.1e-07 60.5 57 52.6
MSTRG.24280 Avicennia marina HOM05D002128 ORTHO05D002497 1.5e-07 60.1 55 56.4
Potri.008G135200 Populus trichocarpa HOM05D002128 ORTHO05D002497 1.5e-07 60.1 38 76.3
Migut.E00487 Erythranthe guttata HOM05D002128 ORTHO05D002497 2.5e-07 59.3 106 37.7
Eucgr.G02098 Eucalyptus grandis HOM05D002128 ORTHO05D002497 2.5e-07 59.3 57 54.4
HanXRQChr17g0550631 Helianthus annuus HOM05D002128 ORTHO05D002497 3.3e-07 58.9 57 52.6
Hma1.2p1_0277F.1_g111630 Hydrangea macrophylla HOM05D002128 ORTHO05D002497 3.3e-07 58.9 58 56.9
FvH4_4g33490 Fragaria vesca HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
FAN07G1608 Fragaria x ananassa HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
FAN12G1509 Fragaria x ananassa HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
FAN17G1944 Fragaria x ananassa HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
FAN22G2331 Fragaria x ananassa HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
RcHm_v2.0_Chr3g0480141 Rosa chinensis HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
RcHm_v2.0_Chr4g0442801 Rosa chinensis HOM05D002128 ORTHO05D002497 4.3e-07 58.5 38 73.7
AUR62026275 Chenopodium quinoa HOM05D002128 ORTHO05D002497 5.6e-07 58.2 49 59.2
AUR62026463 Chenopodium quinoa HOM05D002128 ORTHO05D002497 5.6e-07 58.2 49 59.2
Lalb_Chr09g0330811 Lupinus albus HOM05D002128 ORTHO05D002497 5.6e-07 58.2 38 73.7
THA.LOC104807921 Tarenaya hassleriana HOM05D002128 ORTHO05D002497 7.3e-07 57.8 57 52.6
ECA246G5067 Erigeron canadensis HOM05D002128 ORTHO05D002497 3.6e-06 55.5 38 68.4
SalBow2G1004 Salvia bowleyana HOM05D002128 ORTHO05D002497 4.7e-06 55.1 106 34.9


User provided reference genes

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