Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 2.5e-195 685.3 342 100.0
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 5.0e-164 581.3 302 96.4
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.2e-141 506.9 300 81.7
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 2.8e-138 495.7 299 79.3
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 4.1e-134 481.9 313 76.7
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 2.1e-133 479.6 316 75.3
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 1.3e-132 476.9 296 78.0
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 2.3e-132 476.1 305 82.0
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 3.0e-132 475.7 300 78.7
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 3.9e-132 475.3 300 77.0
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.1e-130 469.5 302 72.8
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 6.2e-130 468.0 309 73.5
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 2.6e-128 462.6 298 73.8
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 7.6e-128 461.1 300 76.7
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 1.7e-127 459.9 300 74.0
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 2.2e-127 459.5 300 74.3
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.9e-127 459.1 300 71.0
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 3.8e-127 458.8 301 74.8
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 4.9e-127 458.4 298 75.5
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.1e-126 457.2 298 75.2
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 1.4e-126 456.8 301 72.8
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 4.2e-126 455.3 298 75.2
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 4.2e-126 455.3 296 73.3
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 9.3e-126 454.1 296 74.0
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.2e-125 453.8 304 73.7
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.6e-125 453.4 299 75.3
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 1.6e-125 453.4 300 71.7
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 2.1e-125 453.0 298 74.5
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 2.1e-125 453.0 298 74.5
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 2.1e-125 453.0 297 75.1
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 2.1e-125 453.0 300 70.7
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 2.1e-125 453.0 300 71.3
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 2.7e-125 452.6 298 74.5
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 4.6e-125 451.8 298 73.2
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 7.8e-125 451.1 298 73.5
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 7.8e-125 451.1 304 73.0
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 1.0e-124 450.7 298 74.2
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 1.3e-124 450.3 297 74.7
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 1.3e-124 450.3 304 73.0
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.7e-124 449.9 299 74.9
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 5.1e-124 448.4 304 73.0
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 5.1e-124 448.4 299 74.6
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 5.1e-124 448.4 305 72.5
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 8.7e-124 447.6 298 72.8
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 1.5e-123 446.8 304 72.7
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 1.9e-123 446.4 298 73.5
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 2.5e-123 446.0 304 73.0
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 1.6e-122 443.4 301 71.1
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 4.8e-122 441.8 296 73.3
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 6.2e-122 441.4 298 71.8
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 6.2e-122 441.4 314 72.6
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.1e-121 440.7 314 72.6
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.8e-121 439.9 298 70.8
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.4e-121 439.5 333 65.5
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 3.1e-121 439.1 298 72.5
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 4.0e-121 438.7 300 70.3
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.5e-120 436.8 294 70.7
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 2.6e-120 436.0 298 71.5
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.6e-120 436.0 333 65.2
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 4.5e-120 435.3 293 69.6
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 5.8e-120 434.9 296 70.3
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 7.6e-120 434.5 354 65.0
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 9.9e-120 434.1 299 68.6
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 1.3e-119 433.7 298 70.1
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 2.4e-118 429.5 335 63.6
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 4.2e-118 428.7 298 69.8
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.6e-117 426.8 300 71.0
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 2.1e-117 426.4 297 69.0
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 1.3e-116 423.7 298 69.1
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 2.3e-116 422.9 305 65.6
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 6.7e-116 421.4 297 69.0
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 6.7e-116 421.4 301 66.8
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 8.7e-116 421.0 301 69.4
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 1.1e-115 420.6 333 63.1
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 1.5e-115 420.2 302 66.6
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 1.6e-114 416.8 293 67.2
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 3.4e-112 409.1 293 66.2
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 4.5e-112 408.7 293 66.2
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 9.9e-112 407.5 322 65.5
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 1.3e-111 407.1 347 59.9
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 8.4e-111 404.4 302 65.2
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 1.4e-110 403.7 265 70.9
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 4.2e-110 402.1 303 67.3
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 4.6e-109 398.7 295 66.8
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 3.9e-108 395.6 301 64.5
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 8.7e-108 394.4 300 66.3
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 5.6e-107 391.7 267 68.9
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.3e-106 390.6 320 64.4
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 1.4e-105 387.1 301 63.1
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 5.8e-104 381.7 265 71.3
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 1.3e-103 380.6 305 62.3
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 2.2e-103 379.8 296 66.6
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 8.7e-100 367.9 236 75.8
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 3.4e-96 355.9 299 58.5
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 7.6e-96 354.8 299 59.9
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 6.1e-93 345.1 248 69.8
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 1.4e-89 334.0 228 72.8
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 4.1e-89 332.4 217 76.0
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 5.9e-88 328.6 267 60.3
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 1.0e-87 327.8 302 56.0
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 9.4e-86 321.2 298 55.0
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 1.2e-85 320.9 236 66.1
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 7.9e-85 318.2 190 78.4
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 6.7e-84 315.1 304 55.9
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 5.5e-78 295.4 299 51.2
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.3e-76 290.0 213 65.3
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 3.9e-76 289.3 222 64.0
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 3.3e-75 286.2 183 72.1
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 6.7e-68 261.9 275 48.7
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 8.8e-68 261.5 162 74.1
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 1.1e-62 244.6 293 44.7
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 7.2e-62 241.9 303 44.2
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 1.8e-60 237.3 302 42.7
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 2.6e-59 233.4 301 45.5
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 7.0e-57 225.3 170 68.2
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 5.7e-51 205.7 152 63.8
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.3e-50 204.5 120 74.2
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 5.2e-44 182.6 139 66.9
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 2.4e-41 173.7 225 44.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 9.2e-41 171.8 192 44.8
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.4e-36 157.9 162 59.9
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 8.9e-36 155.2 320 34.4
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 2.7e-32 143.7 144 55.6
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 4.6e-32 142.9 290 33.4
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.3e-31 141.4 120 61.7
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 2.3e-28 130.6 113 56.6
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 1.1e-25 121.7 276 33.0
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 1.7e-15 87.8 59 71.2
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 8.7e-15 85.5 65 67.7
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.1e-14 85.1 65 58.5
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 6.4e-10 69.3 67 46.3
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 7.1e-09 65.9 48 66.7
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 9.3e-09 65.5 224 24.6
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 3.5e-08 63.5 66 48.5
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 8.7e-07 58.9 48 58.3


User provided reference genes

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