Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 3.1e-173 611.7 309 100.0
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 6.6e-147 524.2 309 84.5
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.8e-145 518.8 307 84.0
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 2.6e-143 512.3 307 83.1
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 4.3e-138 495.0 309 81.6
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 5.6e-138 494.6 307 79.8
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 5.8e-135 484.6 308 77.6
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 3.2e-133 478.8 309 76.1
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 3.3e-130 468.8 309 75.1
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.5e-127 459.9 310 73.5
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 2.6e-127 459.1 307 73.3
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 3.8e-126 455.3 307 71.0
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.1e-125 453.8 307 73.3
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 9.3e-125 450.7 309 72.8
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 3.5e-124 448.7 307 72.0
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 4.6e-124 448.4 320 70.9
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 3.0e-123 445.7 309 70.9
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 5.1e-123 444.9 309 70.6
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.9e-122 443.0 307 70.4
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.6e-121 439.9 309 70.9
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 2.1e-121 439.5 309 70.2
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.8e-121 439.1 307 70.4
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.1e-120 437.2 310 69.4
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.4e-120 436.8 310 69.4
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 9.0e-120 434.1 310 69.4
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 1.2e-119 433.7 309 69.9
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 3.4e-119 432.2 309 67.3
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 2.2e-118 429.5 305 70.8
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 4.9e-118 428.3 307 69.1
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 8.4e-118 427.6 309 68.6
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.1e-117 427.2 309 68.0
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.4e-117 426.8 311 67.5
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-117 426.4 309 68.3
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.4e-117 426.0 309 68.3
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 3.2e-117 425.6 307 67.8
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 4.2e-117 425.2 307 68.7
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 4.2e-117 425.2 307 68.7
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 9.3e-117 424.1 308 68.5
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.2e-116 423.7 309 68.3
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 6.0e-116 421.4 307 66.8
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 7.9e-116 421.0 309 68.3
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.0e-115 420.6 309 67.6
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.3e-115 419.5 308 68.5
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.0e-115 419.1 306 69.6
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 1.5e-114 416.8 429 53.6
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 3.6e-113 412.1 309 66.3
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 6.2e-113 411.4 309 65.7
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 1.1e-112 410.6 307 66.1
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 6.9e-112 407.9 309 66.3
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 9.0e-112 407.5 309 66.0
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 2.9e-110 402.5 309 63.8
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 6.4e-110 401.4 310 64.5
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 6.4e-110 401.4 310 64.5
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.1e-109 400.6 309 65.0
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 7.1e-109 397.9 273 72.2
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 7.1e-109 397.9 309 63.1
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.2e-108 397.1 360 58.6
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 3.5e-108 395.6 353 60.3
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.3e-107 393.7 307 62.9
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.8e-107 393.3 307 63.5
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.3e-107 392.9 250 80.4
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 2.3e-107 392.9 309 62.1
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 3.9e-107 392.1 344 58.4
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.1e-106 390.6 268 76.5
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 1.5e-106 390.2 354 59.9
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.5e-106 389.4 268 76.1
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.3e-105 387.1 309 62.5
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 2.8e-105 386.0 305 61.0
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 8.1e-105 384.4 309 61.5
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 4.0e-104 382.1 309 61.2
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 7.9e-100 367.9 293 62.1
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 6.2e-97 358.2 303 59.7
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 6.9e-96 354.8 309 58.6
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 2.6e-95 352.8 298 62.1
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 5.8e-95 351.7 310 58.4
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.3e-94 350.5 304 57.2
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 1.4e-93 347.1 308 56.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 2.5e-93 346.3 308 55.8
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 2.5e-93 346.3 308 55.8
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 4.6e-92 342.0 304 55.6
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 4.6e-92 342.0 308 56.5
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 3.3e-90 335.9 314 54.8
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 6.3e-89 331.6 237 68.8
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 6.9e-88 328.2 293 56.0
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 5.9e-87 325.1 308 52.9
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 7.7e-87 324.7 233 67.0
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 7.7e-87 324.7 238 67.6
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.0e-86 324.3 308 51.9
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 1.7e-86 323.6 219 76.7
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 2.9e-86 322.8 308 53.2
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 3.8e-86 322.4 308 53.2
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 5.0e-86 322.0 228 74.1
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 7.2e-85 318.2 291 55.3
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 9.4e-85 317.8 243 68.3
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 5.1e-83 312.0 309 54.4
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 2.5e-82 309.7 222 68.5
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 2.5e-82 309.7 326 54.3
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 7.2e-77 291.6 306 49.3
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 3.1e-72 276.2 292 47.3
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.4e-67 260.8 176 73.9
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 4.5e-63 245.7 242 52.9
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 1.2e-55 221.1 307 43.3
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 9.2e-48 194.9 293 35.8
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.9e-45 187.2 115 75.7
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.8e-35 154.1 272 30.1
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.3e-35 153.7 112 65.2
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 3.1e-27 126.7 67 86.6
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.2e-26 124.8 67 85.1
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.4e-24 117.9 67 77.6
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 1.0e-22 111.7 65 75.4
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 3.0e-22 110.2 64 75.0
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 2.6e-10 70.5 62 53.2


User provided reference genes

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