Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 1.0e-41 173.7 145 100.0
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 4.2e-27 125.2 146 74.7
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.5e-20 101.3 145 54.5
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.9e-18 94.4 124 46.0
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 3.0e-17 92.4 153 57.5
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.1e-14 84.0 145 56.6
ATR0820G076 Amborella trichopoda HOM05D002879 ORTHO05D002930 9.0e-14 80.9 130 66.9
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 9.0e-14 80.9 131 64.1
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.0e-13 79.7 89 78.7
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.4e-13 79.0 145 45.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 2.9e-12 75.9 88 56.8
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.9e-12 75.9 85 71.8
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 7.2e-11 71.2 126 63.5
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 7.2e-11 71.2 93 51.6
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 9.4e-11 70.9 89 57.3
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 2.1e-10 69.7 64 81.2
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.1e-10 69.7 86 46.5
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.7e-10 69.3 126 46.8
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.7e-10 69.3 126 46.8
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.7e-10 69.3 64 87.5
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.6e-10 68.9 124 50.0
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.6e-10 68.6 89 56.2
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.1e-10 68.2 148 46.6
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.1e-10 68.2 80 47.5
Eucgr.E02061 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.9e-10 67.8 61 91.8
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.8e-09 66.6 89 55.1
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-09 65.9 131 61.1
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 3.9e-09 65.5 98 74.5
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 5.1e-09 65.1 91 62.6
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 6.7e-09 64.7 63 69.8
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.7e-09 64.7 91 60.4
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 8.8e-09 64.3 121 53.7
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.8e-09 64.3 77 59.7
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.8e-09 64.3 101 61.4
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-08 63.9 82 64.6
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.3e-08 62.4 82 63.4
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.3e-08 62.0 82 63.4
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.3e-08 62.0 124 57.3
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 7.4e-08 61.2 97 49.5
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 7.4e-08 61.2 89 71.9
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 9.7e-08 60.8 131 58.8
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 9.7e-08 60.8 97 45.4
TAR381G0478 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.7e-08 60.8 77 62.3
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.3e-07 60.5 63 65.1
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 1.7e-07 60.1 91 71.4
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.2e-07 59.7 91 63.7
PGR044G2207 Punica granatum HOM05D002879 ORTHO05D002930 2.2e-07 59.7 121 56.2
QL02p038867 Quercus lobata HOM05D002879 ORTHO05D002930 2.2e-07 59.7 156 60.9
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-07 59.7 147 44.2
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.8e-07 59.3 95 35.8
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 2.8e-07 59.3 88 68.2
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 2.8e-07 59.3 88 53.4
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 2.8e-07 59.3 135 54.8
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-07 59.3 147 40.8
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 4.8e-07 58.5 108 55.6
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 4.8e-07 58.5 108 55.6
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 6.3e-07 58.2 125 46.4
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 6.3e-07 58.2 120 57.5
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.3e-07 58.2 128 57.0
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 6.3e-07 58.2 104 51.9
Haze_17768 Corylus avellana HOM05D066527 ORTHO05D002930 8.2e-07 57.8 91 58.2
MD10G1029100 Malus domestica HOM05D002879 ORTHO05D002930 8.2e-07 57.8 60 86.7
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.4e-06 57.0 100 49.0
AUR62040592 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 57.0 128 59.4
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.4e-06 57.0 66 57.6
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.8e-06 56.6 127 52.8
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.8e-06 56.6 82 35.4
PGR044G2425 Punica granatum HOM05D002879 ORTHO05D002930 1.8e-06 56.6 126 53.2
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 3.1e-06 55.8 123 49.6
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.1e-06 55.8 64 56.2
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.1e-06 55.8 120 45.8
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 3.1e-06 55.8 60 43.3
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.1e-06 55.5 118 56.8
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.3e-06 55.1 122 55.7
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.3e-06 55.1 122 55.7
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.9e-06 54.7 91 57.1


User provided reference genes

Program Settings