Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.0e-131 473.4 240 100.0
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 1.6e-92 343.2 246 76.4
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.7e-86 323.2 241 73.0
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 6.4e-81 304.7 237 68.4
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.6e-76 290.0 243 67.1
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 2.8e-76 289.3 243 67.9
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 4.7e-76 288.5 239 65.3
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.1e-75 287.3 231 65.8
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 2.3e-75 286.2 239 63.6
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 3.1e-75 285.8 226 69.5
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 3.1e-75 285.8 245 65.3
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 4.0e-75 285.4 243 65.4
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 4.0e-75 285.4 249 66.3
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 6.8e-75 284.6 239 62.8
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 8.9e-75 284.3 243 64.2
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 7.5e-74 281.2 225 70.2
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.3e-73 280.4 244 65.2
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.7e-73 278.9 251 63.7
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.1e-72 277.3 238 64.3
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 4.1e-72 275.4 240 64.2
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 7.1e-72 274.6 242 64.0
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 7.8e-71 271.2 233 63.1
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.7e-70 270.0 225 68.9
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.5e-69 266.9 235 63.0
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.3e-69 265.4 246 61.0
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.6e-69 265.0 247 60.7
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 5.6e-69 265.0 239 64.0
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 7.3e-69 264.6 244 61.5
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 1.6e-68 263.5 246 60.6
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 2.8e-68 262.7 250 60.4
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.7e-68 261.9 246 60.6
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.7e-68 261.9 246 60.2
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.7e-68 261.9 239 63.6
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 6.2e-68 261.5 219 66.7
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 8.1e-68 261.2 246 63.0
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.1e-67 260.8 213 66.2
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 2.3e-67 259.6 240 62.9
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 5.2e-67 258.5 244 61.1
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 5.2e-67 258.5 231 65.8
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.5e-66 256.9 241 59.8
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 5.8e-66 255.0 244 59.8
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.7e-65 253.4 247 56.7
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.7e-65 253.4 238 57.1
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 2.9e-65 252.7 247 60.7
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.1e-64 250.8 250 60.4
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.1e-64 250.8 235 60.9
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.9e-64 250.0 238 61.3
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 2.4e-64 249.6 243 59.3
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 5.4e-64 248.4 236 57.2
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 7.1e-64 248.1 242 59.1
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 9.2e-64 247.7 242 56.6
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.2e-63 247.3 238 58.8
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.6e-63 246.9 233 63.9
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.6e-63 246.9 215 63.7
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.5e-63 245.7 222 59.9
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 3.9e-62 242.3 250 58.4
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 6.6e-62 241.5 248 57.7
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 6.6e-62 241.5 245 57.1
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.5e-61 240.4 252 58.7
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.9e-61 240.0 241 59.3
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.3e-61 239.2 247 57.9
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 5.6e-61 238.4 243 53.9
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.2e-60 237.3 213 60.1
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.1e-60 236.5 254 57.1
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 2.8e-60 236.1 242 57.9
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.8e-60 236.1 230 59.1
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 3.6e-60 235.7 218 60.6
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 1.4e-59 233.8 237 53.6
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 1.4e-59 233.8 237 53.6
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 5.2e-59 231.9 243 56.4
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.2e-58 230.7 245 51.4
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 2.6e-58 229.6 244 53.7
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 7.6e-58 228.0 244 54.9
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 2.9e-57 226.1 269 51.7
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 3.2e-56 222.6 222 54.1
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 5.4e-56 221.9 240 55.4
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.1e-56 221.5 241 52.3
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 1.6e-55 220.3 235 51.9
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.3e-54 216.5 215 55.3
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 3.9e-54 215.7 228 56.6
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 8.7e-54 214.5 220 55.9
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 8.7e-54 214.5 191 60.7
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.5e-53 213.8 246 52.0
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.9e-53 213.4 218 59.2
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 3.3e-53 212.6 218 55.5
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.3e-53 212.6 208 59.1
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 3.3e-53 212.6 199 56.3
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 4.3e-53 212.2 241 53.1
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.3e-52 210.7 246 53.3
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.3e-52 210.7 243 52.7
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 2.8e-52 209.5 246 53.7
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 6.2e-52 208.4 239 52.3
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 8.1e-52 208.0 243 52.3
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 1.8e-51 206.8 240 52.5
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 1.8e-51 206.8 207 56.5
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 4.0e-51 205.7 289 47.1
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 9.0e-51 204.5 240 51.7
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 2.0e-50 203.4 237 51.5
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 3.4e-50 202.6 245 51.8
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 7.6e-50 201.4 220 53.6
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 9.9e-50 201.1 245 51.4
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 9.9e-50 201.1 245 51.4
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 2.9e-49 199.5 220 54.1
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 3.8e-49 199.1 245 51.0
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 6.4e-49 198.4 285 47.0
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.4e-48 197.2 235 49.8
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.9e-48 196.8 220 51.8
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.0e-46 189.5 244 45.5
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 9.6e-45 184.5 186 58.1
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.2e-42 177.6 247 46.6
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 6.4e-41 171.8 196 50.5
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.5e-40 168.7 253 47.4
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 2.7e-39 166.4 194 52.6
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 3.5e-39 166.0 194 52.6
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.3e-38 164.1 170 55.3
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 1.8e-38 163.7 204 51.5
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 2.3e-38 163.3 208 48.1
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 8.7e-38 161.4 192 50.5
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 7.4e-37 158.3 192 50.0
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 7.4e-37 158.3 192 50.0
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.1e-36 156.8 209 45.9
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 1.7e-33 147.1 137 62.0
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.2e-28 130.2 237 38.8
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.0e-26 123.6 217 40.6
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 8.7e-22 108.2 82 74.4
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 2.2e-20 103.6 161 45.3
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 2.8e-20 103.2 115 52.2
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.3e-14 83.6 177 39.0
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 3.2e-08 63.2 210 28.1
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 3.2e-08 63.2 63 52.4


User provided reference genes

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