Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.4e-258 894.4 440 100.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.7e-178 629.0 360 82.5
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.0e-177 627.1 361 84.5
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.5e-176 622.5 360 83.1
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.0e-174 614.0 360 83.1
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.1e-170 602.8 366 79.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 3.0e-169 599.0 360 79.2
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.1e-169 598.2 362 78.5
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 6.2e-167 591.3 364 78.8
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 9.0e-166 587.4 366 75.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.6e-162 576.6 360 73.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 3.9e-161 572.0 360 74.7
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 6.7e-161 571.2 360 76.9
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 6.7e-161 571.2 360 73.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.5e-160 570.1 358 74.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 7.4e-160 567.8 360 75.6
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.6e-159 566.6 368 74.7
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.6e-159 566.6 359 74.1
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.2e-159 566.2 393 71.2
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 2.8e-159 565.8 360 74.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.8e-159 565.1 458 63.8
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 8.2e-159 564.3 360 75.3
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.4e-158 563.5 362 71.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 3.1e-158 562.4 362 73.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 3.4e-157 558.9 359 73.5
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.9e-157 558.1 339 78.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.9e-157 558.1 360 73.3
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.9e-157 558.1 359 73.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.7e-156 556.6 359 73.3
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.9e-156 555.8 359 73.3
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.2e-155 552.0 360 71.9
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 9.4e-155 550.8 367 72.5
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.6e-154 550.1 360 73.3
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.6e-154 550.1 360 73.6
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.0e-153 547.4 360 71.9
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.4e-153 547.0 360 73.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 2.3e-153 546.2 360 72.5
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 8.8e-153 544.3 360 72.5
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.1e-152 543.9 424 63.4
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.0e-152 543.1 361 71.2
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.0e-152 543.1 424 63.2
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 7.4e-152 541.2 361 71.2
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.2e-148 529.6 373 69.7
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 5.5e-147 525.0 362 68.5
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 7.2e-147 524.6 360 69.2
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 9.4e-147 524.2 362 68.5
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.6e-146 523.5 360 68.9
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.7e-146 522.7 363 70.2
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 4.7e-146 521.9 361 70.1
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 6.1e-146 521.5 361 68.7
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.2e-143 513.1 360 67.2
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 5.3e-142 508.4 366 65.8
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 2.6e-141 506.1 328 72.3
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.2e-140 503.1 359 68.8
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.5e-139 499.6 361 66.2
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.8e-137 493.4 361 66.8
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.8e-137 493.4 361 66.8
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.2e-137 491.9 361 66.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.5e-136 490.3 362 64.9
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 3.7e-135 485.7 513 52.6
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 2.5e-131 473.0 365 64.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.7e-130 469.5 366 65.0
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 2.4e-126 456.4 465 53.5
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.7e-119 433.7 291 71.8
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.1e-97 361.3 299 59.2
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 4.7e-90 335.9 200 77.0
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 8.9e-89 331.6 251 63.7
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 2.1e-85 320.5 367 43.9
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.7e-85 320.1 206 71.4
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.6e-85 319.3 352 51.7
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.6e-83 312.4 369 44.2
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.5e-80 304.3 215 66.5
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.3e-68 264.6 169 73.4
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.3e-63 248.1 249 53.0
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 2.2e-63 247.3 156 71.8
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.8e-60 237.7 140 77.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.0e-57 226.5 368 36.1
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 4.5e-56 223.0 160 67.5
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.3e-55 221.5 242 47.5
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.1e-43 181.8 116 74.1
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.0e-40 171.0 128 65.6
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.5e-38 164.1 431 27.6
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.8e-33 147.9 388 29.6
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 4.5e-32 143.3 87 74.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 4.5e-32 143.3 87 74.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.5e-32 143.3 103 68.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.9e-32 142.9 102 72.5
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.5e-31 139.4 71 81.7
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.9e-30 137.9 109 58.7
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.2e-30 136.0 113 65.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 3.9e-28 130.2 69 82.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.4e-27 125.9 70 87.1
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.7e-27 125.6 70 85.7
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.8e-26 124.0 70 85.7
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.2e-26 122.5 70 85.7
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.1e-25 120.6 160 48.1
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 5.3e-25 119.8 111 55.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.2e-21 108.6 64 75.0
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.6e-21 107.1 73 72.6
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.3e-20 104.4 91 63.7
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.3e-18 98.6 96 44.8
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.4e-17 94.4 302 27.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.4e-17 94.4 49 75.5
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.0e-12 77.0 49 63.3
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.5e-11 75.1 57 59.6
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.7e-10 71.6 93 45.2
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.7e-07 61.6 98 45.9


User provided reference genes

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