Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25821 Davidia involucrata HOM05D000002 ORTHO05D000001 4.4e-192 674.5 344 100.0
Hma1.2p1_0700F.1_g205820 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.4e-43 179.5 280 44.3
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 1.7e-34 151.0 145 61.4
Hma1.2p1_0006F.1_g004720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-28 131.3 122 59.8
Hma1.2p1_0021F.1_g014420 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 5.1e-23 112.8 123 53.7
Hma1.2p1_0354F.1_g133710 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 5.3e-20 102.8 126 50.0
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-19 99.4 267 31.8
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-19 99.4 283 29.7
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-18 97.4 315 28.3
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 6.7e-15 85.9 229 28.8
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-14 85.1 331 25.4
Lj2C1206G8 Lonicera japonica HOM05D014274 ORTHO05D000001 1.3e-13 81.6 269 29.0
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 1.8e-12 77.8 212 30.2
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 3.8e-10 70.1 97 40.2
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-10 69.3 225 25.8
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-09 68.2 225 25.3
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 2.1e-08 64.3 262 28.6
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.1e-08 64.3 251 26.7
FvH4_6g11492 Fragaria vesca HOM05D000002 ORTHO05D000001 6.0e-08 62.8 258 27.5
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.0e-07 62.0 278 24.8
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-07 61.2 237 27.0
TWI39G0276 Tripterygium wilfordii HOM05D010760 ORTHO05D000001 3.0e-07 60.5 85 44.7
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.9e-07 60.1 210 24.3
PSO017G4051 Papaver somniferum HOM05D000002 ORTHO05D000001 5.1e-07 59.7 171 31.0
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-07 59.3 219 26.9
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.7e-07 59.3 114 32.5
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-07 58.9 171 28.1
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-06 58.5 234 23.9
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-06 58.5 244 24.6
Atru.chr2.1455 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 58.2 125 36.0
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.5e-06 58.2 163 29.4
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.5e-06 58.2 163 29.4
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 58.2 161 28.0
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 57.4 171 27.5
RcHm_v2.0_Chr2g0159441 Rosa chinensis HOM05D000002 ORTHO05D000001 3.3e-06 57.0 127 29.1
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 5.7e-06 56.2 148 32.4
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.4e-06 55.8 107 31.8
PSO017G2967 Papaver somniferum HOM05D000002 ORTHO05D000001 9.6e-06 55.5 117 29.9


User provided reference genes

Program Settings