Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.5e-175 619.4 311 100.0
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 4.5e-119 431.8 248 83.5
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.9e-118 428.3 251 81.7
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.4e-117 426.8 251 81.3
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 3.2e-117 425.6 252 81.7
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 2.1e-116 422.9 250 81.6
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 7.9e-116 421.0 252 81.3
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 3.9e-115 418.7 252 80.2
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.9e-114 416.4 251 80.1
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 5.7e-114 414.8 248 81.5
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 3.7e-113 412.1 248 82.3
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 3.7e-113 412.1 248 81.9
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 8.2e-113 411.0 253 79.8
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 8.2e-113 411.0 251 80.1
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.1e-112 410.6 250 81.6
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.8e-112 409.8 304 68.1
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 3.1e-112 409.1 256 80.9
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.1e-112 408.7 252 79.0
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 6.9e-112 407.9 304 68.1
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 2.0e-111 406.4 244 79.5
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 5.9e-111 404.8 250 78.8
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 7.7e-111 404.4 250 82.0
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 1.0e-110 404.1 250 77.2
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.7e-110 403.3 252 77.4
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.1e-109 400.6 252 76.6
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.9e-109 399.8 251 78.1
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 5.5e-109 398.3 251 77.7
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 7.2e-109 397.9 253 79.8
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.2e-108 397.1 249 76.7
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.6e-108 396.7 283 72.4
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 3.6e-108 395.6 252 75.4
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 6.1e-108 394.8 302 68.9
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 6.1e-108 394.8 251 76.9
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.8e-107 393.3 246 79.7
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 2.3e-107 392.9 250 75.6
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 2.0e-106 389.8 250 73.6
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 2.0e-106 389.8 240 80.8
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 2.5e-106 389.4 247 74.5
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 2.5e-106 389.4 251 76.9
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 3.3e-106 389.0 244 77.5
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 4.3e-106 388.7 253 76.7
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 7.4e-106 387.9 253 74.3
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 9.7e-106 387.5 251 75.7
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.3e-105 387.1 253 73.9
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.3e-105 387.1 252 76.6
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 2.8e-105 386.0 305 65.2
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 3.7e-105 385.6 244 77.0
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 6.3e-105 384.8 305 65.9
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.4e-104 383.6 251 75.3
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 2.0e-103 379.8 251 74.9
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 2.0e-103 379.8 254 76.8
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 2.0e-103 379.8 268 72.0
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 3.4e-103 379.0 252 71.0
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 3.4e-103 379.0 254 74.8
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 4.5e-103 378.6 247 74.9
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 1.0e-102 377.5 252 73.0
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.2e-102 376.3 251 74.1
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 2.9e-102 375.9 248 73.8
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.9e-102 375.9 250 73.6
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 6.5e-102 374.8 256 74.6
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 6.5e-102 374.8 240 75.8
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.1e-101 374.0 249 75.5
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 5.5e-101 371.7 303 62.7
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.2e-101 371.3 251 72.9
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.6e-100 370.2 250 72.8
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 2.7e-100 369.4 207 85.0
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.6e-100 369.0 251 72.5
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 3.6e-100 369.0 303 62.0
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 6.1e-100 368.2 241 74.3
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 6.1e-100 368.2 252 69.8
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.9e-100 367.9 282 66.7
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 7.9e-100 367.9 241 74.3
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.4e-99 367.1 251 73.3
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 2.3e-99 366.3 254 74.8
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 3.0e-99 365.9 251 70.9
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 4.4e-98 362.1 306 61.8
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 9.7e-98 360.9 241 73.9
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 1.3e-97 360.5 257 68.9
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 2.2e-97 359.8 233 75.1
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 3.7e-97 359.0 251 71.7
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 4.8e-97 358.6 258 69.4
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 1.8e-96 356.7 257 68.1
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 4.1e-96 355.5 255 71.8
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 9.1e-96 354.4 242 74.0
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.0e-95 353.2 251 72.5
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 3.5e-95 352.4 251 73.7
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.0e-94 350.9 250 68.8
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 1.0e-94 350.9 252 67.5
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 1.3e-94 350.5 257 72.8
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 2.5e-93 346.3 257 69.6
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 3.2e-93 345.9 254 70.5
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 9.4e-93 344.4 258 69.4
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 9.4e-93 344.4 258 69.4
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 1.2e-92 344.0 254 70.1
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 2.7e-92 342.8 258 69.4
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 3.6e-92 342.4 257 67.7
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 9.7e-90 334.3 197 81.2
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 1.3e-89 334.0 247 67.2
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.1e-88 330.9 292 60.3
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 1.1e-88 330.9 254 66.5
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 3.1e-88 329.3 255 67.1
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 9.1e-88 327.8 253 66.8
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 1.2e-87 327.4 251 66.5
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 2.0e-87 326.6 252 66.3
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 7.7e-87 324.7 230 70.9
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 1.0e-86 324.3 209 78.0
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.3e-81 307.4 245 66.5
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 8.8e-75 284.6 231 63.6
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 4.9e-73 278.9 162 81.5
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 9.1e-72 274.6 210 63.8
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 6.6e-70 268.5 156 78.8
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 7.2e-69 265.0 200 65.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 6.1e-68 261.9 139 88.5
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 8.0e-68 261.5 200 65.5
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 5.2e-67 258.8 156 76.3
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 2.2e-65 253.4 239 59.0
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.6e-63 245.7 237 56.1
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.9e-57 226.5 136 78.7
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 7.0e-56 221.9 231 56.3
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.5e-55 219.5 232 52.2
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 1.1e-51 208.0 151 66.9
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 7.8e-47 191.8 140 69.3
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 7.3e-45 185.3 148 62.8
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.4e-42 176.0 148 62.8
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 1.7e-41 174.1 128 62.5
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 5.6e-37 159.1 155 51.6
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.8e-28 130.2 73 83.6
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 2.8e-28 130.2 79 78.5
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 5.5e-16 89.4 70 64.3
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 1.0e-09 68.6 53 64.2


User provided reference genes

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