Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25781 Davidia involucrata HOM05D003637 ORTHO05D004175 9.1e-110 400.2 197 100.0
CSS0048399 Camellia sinensis var. sinensis HOM05D003637 ORTHO05D004175 6.7e-12 75.1 90 52.2
ClCG11G008420 Citrullus lanatus HOM05D003637 ORTHO05D004175 2.6e-11 73.2 106 44.3
MELO3C008093.2 Cucumis melo HOM05D003637 ORTHO05D004175 2.6e-11 73.2 106 44.3
PGR042G1411 Punica granatum HOM05D003637 ORTHO05D004175 5.7e-11 72.0 120 45.0
CsaV3_2G033230 Cucumis sativus L. HOM05D003637 ORTHO05D004175 9.7e-11 71.2 106 44.3
vmacro18730 Vaccinium macrocarpon HOM05D003637 ORTHO05D004175 9.7e-11 71.2 85 54.1
Sc25g0003100 Simmondsia chinensis HOM05D003637 ORTHO05D004175 2.2e-10 70.1 109 45.0
TAR628G0957 Trochodendron aralioides HOM05D003637 ORTHO05D004175 2.8e-10 69.7 105 43.8
Sed0019638 Sechium edule HOM05D003637 ORTHO05D004175 3.7e-10 69.3 79 54.4
Haze_10275 Corylus avellana HOM05D003637 ORTHO05D004175 1.4e-09 67.4 108 44.4
PGR083G1739 Punica granatum HOM05D003637 ORTHO05D004175 1.4e-09 67.4 102 46.1
TAR374G0451 Trochodendron aralioides HOM05D003637 ORTHO05D004175 1.4e-09 67.4 75 54.7
Ciclev10018820m.g Citrus clementina HOM05D003637 ORTHO05D004175 7.0e-09 65.1 79 51.9
Atru.chr13.2508 Acer truncatum HOM05D003637 ORTHO05D004175 2.6e-08 63.2 99 47.5
Psat6g083160 Pisum sativum HOM05D003637 ORTHO05D004175 7.7e-08 61.6 92 47.8
Atru.chr13.2499 Acer truncatum HOM05D003637 ORTHO05D004175 1.0e-07 61.2 99 47.5
Cpa.g.sc1431.2 Carica papaya HOM05D003637 ORTHO05D004175 2.2e-07 60.1 118 42.4
Cfa004677 Carpinus fangiana HOM05D003637 ORTHO05D004175 2.9e-07 59.7 94 45.7
THA.LOC104820917 Tarenaya hassleriana HOM05D003637 ORTHO05D004175 3.8e-07 59.3 94 45.7
arahy.Tifrunner.gnm1.ann1.JT5ZHZ Arachis hypogaea HOM05D003637 ORTHO05D004175 8.5e-07 58.2 86 48.8
Hund26943 Selenicereus undatus HOM05D003637 ORTHO05D004175 1.1e-06 57.8 107 41.1
Aa31LG5G13230 Aethionema arabicum HOM05D003637 ORTHO05D004175 1.5e-06 57.4 76 47.4
Carub.0003s0186 Capsella rubella HOM05D003637 ORTHO05D004175 1.5e-06 57.4 111 40.5
Eucgr.E00010 Eucalyptus grandis HOM05D003637 ORTHO05D004175 1.9e-06 57.0 95 47.4
Sp3g01790 Schrenkiella parvula HOM05D003637 ORTHO05D004175 1.9e-06 57.0 112 40.2
C03p40270 Brassica napus HOM05D003637 ORTHO05D004175 2.5e-06 56.6 93 41.9
Manes.02G201900 Manihot esculenta HOM05D003637 ORTHO05D004175 3.2e-06 56.2 95 47.4
AT3G02760 Arabidopsis thaliana HOM05D003637 ORTHO05D004175 5.5e-06 55.5 79 45.6
EL10Ac1g01273 Beta vulgaris HOM05D003637 ORTHO05D004175 5.5e-06 55.5 98 42.9
arahy.Tifrunner.gnm1.ann1.5D638A Arachis hypogaea HOM05D003637 ORTHO05D004175 7.2e-06 55.1 80 50.0
arahy.Tifrunner.gnm1.ann1.TE3K01 Arachis hypogaea HOM05D003637 ORTHO05D004175 7.2e-06 55.1 85 47.1
BolC1t05898H Brassica oleracea HOM05D003637 ORTHO05D004175 7.2e-06 55.1 75 46.7
Oeu019452.1 Olea europaea HOM05D003637 ORTHO05D004175 7.2e-06 55.1 58 56.9
AL3G12170 Arabidopsis lyrata HOM05D003637 ORTHO05D004175 9.4e-06 54.7 101 42.6
arahy.Tifrunner.gnm1.ann1.ICJU69 Arachis hypogaea HOM05D003637 ORTHO05D004175 9.4e-06 54.7 86 47.7


User provided reference genes

Program Settings