Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 3.8e-57 224.9 141 100.0
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 9.3e-32 140.6 131 57.3
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.1e-24 117.1 130 55.4
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 5.5e-24 114.8 130 49.2
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.1e-19 98.6 132 52.3
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.6e-18 95.9 134 45.5
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.8e-17 92.0 131 53.4
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.1e-16 90.5 134 41.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.9e-16 89.7 131 40.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 5.5e-16 88.2 84 53.6
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.2e-15 87.0 129 47.3
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 1.6e-15 86.7 127 53.5
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 2.1e-15 86.3 130 43.8
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 2.1e-15 86.3 129 37.2
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 2.1e-15 86.3 130 40.8
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.7e-15 85.9 130 40.0
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 4.7e-15 85.1 125 58.4
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 4.7e-15 85.1 83 51.8
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.7e-15 85.1 129 54.3
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 6.1e-15 84.7 122 51.6
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 7.9e-15 84.3 124 58.9
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 7.9e-15 84.3 84 50.0
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.0e-14 84.0 124 46.0
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.8e-14 83.2 140 37.1
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 1.8e-14 83.2 127 40.2
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.8e-14 83.2 128 39.8
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.8e-14 83.2 130 41.5
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.3e-14 82.8 130 40.8
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.0e-14 82.4 130 47.7
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 3.0e-14 82.4 134 47.0
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 3.0e-14 82.4 123 40.7
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 6.7e-14 81.3 119 47.1
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 6.7e-14 81.3 85 69.4
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 6.7e-14 81.3 133 40.6
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 8.8e-14 80.9 131 48.9
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 8.8e-14 80.9 123 39.0
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.1e-13 80.5 125 38.4
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 1.5e-13 80.1 129 35.7
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.5e-13 80.1 139 37.4
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 2.6e-13 79.3 96 44.8
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 2.6e-13 79.3 75 57.3
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 4.4e-13 78.6 86 51.2
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 4.4e-13 78.6 88 60.2
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 4.4e-13 78.6 143 45.5
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 9.7e-13 77.4 83 48.2
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 9.7e-13 77.4 82 51.2
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.3e-12 77.0 123 41.5
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.2e-12 76.3 80 48.8
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 2.8e-12 75.9 129 34.9
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 2.8e-12 75.9 126 47.6
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 4.8e-12 75.1 83 47.0
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 4.8e-12 75.1 124 37.1
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 6.3e-12 74.7 96 63.5
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 6.3e-12 74.7 75 56.0
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 6.3e-12 74.7 129 50.4
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 6.3e-12 74.7 122 45.9
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.1e-11 73.9 89 43.8
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.4e-11 73.6 82 58.5
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.8e-11 73.2 122 42.6
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 7.0e-11 71.2 132 44.7
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 9.1e-11 70.9 134 43.3
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 9.1e-11 70.9 124 33.9
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 1.2e-10 70.5 86 57.0
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.6e-10 70.1 134 44.0
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 1.6e-10 70.1 83 61.4
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.0e-10 69.7 84 53.6
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.6e-10 69.3 131 44.3
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.6e-10 69.3 95 41.1
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 7.7e-10 67.8 125 42.4
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.0e-09 67.4 130 43.1
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.7e-09 66.6 90 40.0
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 1.7e-09 66.6 84 44.0
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.7e-09 66.6 84 45.2
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 2.2e-09 66.2 87 43.7
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 2.9e-09 65.9 80 46.2
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 5.0e-09 65.1 128 35.9
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 6.5e-09 64.7 77 46.8
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 6.5e-09 64.7 84 46.4
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 6.5e-09 64.7 87 59.8
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 8.5e-09 64.3 135 45.2
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.1e-08 63.9 84 44.0
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.1e-08 63.9 71 42.3
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.9e-08 63.2 87 42.5
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 9.4e-08 60.8 120 31.7
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 9.4e-08 60.8 86 41.9
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 9.4e-08 60.8 122 44.3
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 9.4e-08 60.8 82 41.5
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-07 60.5 84 45.2
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 1.2e-07 60.5 86 41.9
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 1.2e-07 60.5 123 34.1
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.2e-07 60.5 85 38.8
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.1e-07 59.7 75 53.3
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 2.1e-07 59.7 75 53.3
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 2.7e-07 59.3 94 37.2
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 2.7e-07 59.3 94 37.2
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 2.7e-07 59.3 130 33.1
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.6e-07 58.9 92 35.9
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.6e-07 58.9 81 39.5
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 3.6e-07 58.9 129 43.4
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 3.6e-07 58.9 85 42.4
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 4.7e-07 58.5 90 37.8
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 6.1e-07 58.2 122 40.2
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 6.1e-07 58.2 130 30.0
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 8.0e-07 57.8 129 32.6
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.0e-06 57.4 83 33.7
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 1.4e-06 57.0 94 36.2
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 1.4e-06 57.0 83 41.0
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 2.3e-06 56.2 91 35.2
SHI03806 Sapria himalayana HOM05D005478 ORTHO05D006426 2.3e-06 56.2 131 28.2
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 4.0e-06 55.5 83 38.6
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 6.7e-06 54.7 94 36.2
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 6.7e-06 54.7 77 42.9
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 8.8e-06 54.3 77 44.2
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 8.8e-06 54.3 77 44.2


User provided reference genes

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