Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25607 Davidia involucrata HOM05D002505 ORTHO05D007115 5.5e-198 694.1 354 100.0
Dinv11454 Davidia involucrata HOM05D002505 ORTHO05D007115 4.4e-187 657.9 354 95.5
Dinv37391 Davidia involucrata HOM05D002505 ORTHO05D007115 3.4e-171 605.1 320 96.9
GSVIVG01019628001 Vitis vinifera HOM05D002505 ORTHO05D007115 3.9e-143 511.9 349 74.5
QL02p027659 Quercus lobata HOM05D002505 ORTHO05D007115 1.6e-141 506.5 349 73.6
Actinidia22196 Actinidia chinensis HOM05D002505 ORTHO05D007115 2.8e-141 505.8 346 75.7
Haze_09143 Corylus avellana HOM05D002505 ORTHO05D007115 3.6e-141 505.4 350 74.0
TAR375G0040 Trochodendron aralioides HOM05D002505 ORTHO05D007115 1.1e-140 503.8 351 72.6
Cfa011943 Carpinus fangiana HOM05D002505 ORTHO05D007115 4.0e-140 501.9 349 73.4
Lj2A158G82 Lonicera japonica HOM05D002505 ORTHO05D007115 2.9e-138 495.7 379 69.7
TWI60G0007 Tripterygium wilfordii HOM05D002505 ORTHO05D007115 6.4e-138 494.6 356 69.9
CSS0047752 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D007115 1.9e-137 493.0 349 73.9
CiPaw.11G114300 Carya illinoinensis HOM05D002505 ORTHO05D007115 9.2e-137 490.7 348 72.4
Prupe.5G127300 Prunus persica HOM05D002505 ORTHO05D007115 2.7e-136 489.2 351 71.2
FAN17G1638 Fragaria x ananassa HOM05D002505 ORTHO05D007115 2.5e-134 482.6 352 70.7
FAN07G1120 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.6e-133 479.9 352 70.5
Thecc.03G223700 Theobroma cacao HOM05D002505 ORTHO05D007115 2.8e-133 479.2 349 68.2
CANSAT21G2418 Cannabis sativa HOM05D002505 ORTHO05D007115 3.1e-132 475.7 350 69.4
Ciclev10020379m.g Citrus clementina HOM05D002505 ORTHO05D007115 3.1e-132 475.7 351 67.0
FvH4_4g16080 Fragaria vesca HOM05D002505 ORTHO05D007115 3.1e-132 475.7 352 70.5
FAN12G2820 Fragaria x ananassa HOM05D002505 ORTHO05D007115 3.1e-132 475.7 352 70.5
FAN22G1998 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.5e-131 473.4 352 69.6
Oeu010746.1 Olea europaea HOM05D002505 ORTHO05D007115 2.0e-131 473.0 347 69.7
Peaxi162Scf00074g00358 Petunia axillaris HOM05D002505 ORTHO05D007115 2.0e-131 473.0 348 67.2
Duzib205G1766 Durio zibethinus HOM05D002505 ORTHO05D007115 8.4e-130 467.6 349 67.3
Cpa.g.sc175.6 Carica papaya HOM05D002505 ORTHO05D007115 1.9e-129 466.5 349 67.0
Nitab4.5_0002728g0050 Nicotiana tabacum HOM05D002505 ORTHO05D007115 1.9e-129 466.5 348 67.0
Sopen08g031180 Solanum pennellii HOM05D002505 ORTHO05D007115 7.1e-129 464.5 348 66.4
CAN.G567.73 Capsicum annuum HOM05D002505 ORTHO05D007115 1.2e-128 463.8 348 66.1
vmacro11517 Vaccinium macrocarpon HOM05D002505 ORTHO05D007115 1.2e-128 463.8 417 60.0
Solyc08g082960.3 Solanum lycopersicum HOM05D002505 ORTHO05D007115 1.6e-128 463.4 348 66.7
Potri.003G145100 Populus trichocarpa HOM05D002505 ORTHO05D007115 4.6e-128 461.8 357 66.4
Aqoxy5G02423 Aquilegia oxysepala HOM05D002505 ORTHO05D007115 6.0e-128 461.5 349 66.8
PGSC0003DMG400012246 Solanum tuberosum HOM05D002505 ORTHO05D007115 1.7e-127 459.9 343 65.9
Eucgr.D01694 Eucalyptus grandis HOM05D002505 ORTHO05D007115 3.0e-127 459.1 350 66.6
Ca_12555_v3 Cicer arietinum L. HOM05D002505 ORTHO05D007115 3.9e-127 458.8 352 66.2
Ca_12566_v3 Cicer arietinum L. HOM05D002505 ORTHO05D007115 3.9e-127 458.8 352 66.2
TPR.G36929 Trifolium pratense HOM05D002505 ORTHO05D007115 3.9e-127 458.8 351 66.4
Gohir.A12G238900 Gossypium hirsutum HOM05D002505 ORTHO05D007115 8.7e-127 457.6 350 67.4
Manes.02G004600 Manihot esculenta HOM05D002505 ORTHO05D007115 8.7e-127 457.6 350 68.0
Sabra01G0062100 Salix brachista HOM05D002505 ORTHO05D007115 1.5e-126 456.8 354 66.1
PGR031G3103 Punica granatum HOM05D002505 ORTHO05D007115 3.3e-126 455.7 352 65.3
RcHm_v2.0_Chr7g0186571 Rosa chinensis HOM05D002505 ORTHO05D007115 5.6e-126 454.9 351 66.7
Nitab4.5_0005042g0030 Nicotiana tabacum HOM05D002505 ORTHO05D007115 7.3e-126 454.5 334 66.5
MD06G1114600 Malus domestica HOM05D002505 ORTHO05D007115 9.6e-126 454.1 353 66.0
Aqoxy5G01632 Aquilegia oxysepala HOM05D002505 ORTHO05D007115 2.8e-125 452.6 349 66.2
Gohir.D12G240000 Gossypium hirsutum HOM05D002505 ORTHO05D007115 8.1e-125 451.1 350 66.9
MSTRG.2011 Avicennia marina HOM05D002505 ORTHO05D007115 1.8e-124 449.9 342 65.8
Psat6g045400 Pisum sativum HOM05D002505 ORTHO05D007115 4.0e-124 448.7 351 65.5
arahy.Tifrunner.gnm1.ann1.Y3P1ER Arachis hypogaea HOM05D002505 ORTHO05D007115 1.5e-123 446.8 350 64.6
Gorai.008G257100 Gossypium raimondii HOM05D002505 ORTHO05D007115 1.5e-123 446.8 350 66.3
Lalb_Chr17g0338531 Lupinus albus HOM05D002505 ORTHO05D007115 1.5e-123 446.8 351 64.7
LjContig00141g0018407 Lotus japonicus HOM05D002505 ORTHO05D007115 1.7e-122 443.4 352 64.5
arahy.Tifrunner.gnm1.ann1.31YZJ9 Arachis hypogaea HOM05D002505 ORTHO05D007115 2.9e-122 442.6 350 64.6
Medtr1g032200 Medicago truncatula HOM05D002505 ORTHO05D007115 3.2e-121 439.1 351 64.7
AUR62019897 Chenopodium quinoa HOM05D002505 ORTHO05D007115 9.3e-121 437.6 349 63.6
Glyma.04G232000 Glycine max HOM05D002505 ORTHO05D007115 9.3e-121 437.6 346 63.9
DCAR_009648 Daucus carota HOM05D002505 ORTHO05D007115 2.1e-120 436.4 357 60.8
HanXRQChr02g0047181 Helianthus annuus HOM05D002505 ORTHO05D007115 2.1e-120 436.4 353 62.3
Sed0001422 Sechium edule HOM05D002505 ORTHO05D007115 2.1e-120 436.4 355 64.2
Glyma.06G132900 Glycine max HOM05D002505 ORTHO05D007115 4.6e-120 435.3 347 63.4
EL10Ac5g12461 Beta vulgaris HOM05D002505 ORTHO05D007115 7.9e-120 434.5 350 62.6
AUR62007033 Chenopodium quinoa HOM05D002505 ORTHO05D007115 7.9e-120 434.5 348 62.6
Cc00_g23270 Coffea canephora HOM05D002505 ORTHO05D007115 1.3e-119 433.7 342 65.2
CsaV3_5G036540 Cucumis sativus L. HOM05D002505 ORTHO05D007115 3.9e-119 432.2 350 64.6
Medtr5g025880 Medicago truncatula HOM05D002505 ORTHO05D007115 3.9e-119 432.2 330 65.8
Phvul.009G039500 Phaseolus vulgaris HOM05D002505 ORTHO05D007115 8.7e-119 431.0 347 62.5
MELO3C012450.2 Cucumis melo HOM05D002505 ORTHO05D007115 1.1e-118 430.6 351 64.4
VMungo1309G3079 Vigna mungo HOM05D002505 ORTHO05D007115 1.9e-118 429.9 348 63.8
Migut.J00879 Erythranthe guttata HOM05D002505 ORTHO05D007115 3.3e-118 429.1 351 61.8
Glyma.13G121900 Glycine max HOM05D002505 ORTHO05D007115 7.4e-118 427.9 347 63.7
ClCG05G020760 Citrullus lanatus HOM05D002505 ORTHO05D007115 2.4e-116 422.9 350 62.9
Lalb_Chr10g0095811 Lupinus albus HOM05D002505 ORTHO05D007115 2.4e-116 422.9 351 63.0
ECA240G2126 Erigeron canadensis HOM05D002505 ORTHO05D007115 3.1e-116 422.5 357 62.2
FAN08G0319 Fragaria x ananassa HOM05D002505 ORTHO05D007115 4.0e-116 422.2 300 72.3
MBI04_g06931_MAGBIO Magnolia biondii HOM05D002505 ORTHO05D007115 1.7e-114 416.8 348 61.8
SalBow6G5481 Salvia bowleyana HOM05D002505 ORTHO05D007115 1.1e-113 414.1 351 59.8
SGA_v2.0_scaffold104G30125 Striga asiatica HOM05D002505 ORTHO05D007115 6.7e-111 404.8 351 57.8
PSO339G4385 Papaver somniferum HOM05D002505 ORTHO05D007115 2.8e-109 399.4 358 57.5
COL.COLO4_10772 Corchorus olitorius HOM05D002505 ORTHO05D007115 3.1e-108 396.0 290 69.7
unitig_22.g5105 Utricularia gibba HOM05D002505 ORTHO05D007115 1.5e-107 393.7 346 57.5
Lsat_1_v5_gn_6_9040 Lactuca sativa HOM05D002505 ORTHO05D007115 3.4e-107 392.5 357 57.4
PSO017G1033 Papaver somniferum HOM05D002505 ORTHO05D007115 7.6e-107 391.3 324 61.1
Nn4g26685 Nelumbo nucifera HOM05D002505 ORTHO05D007115 4.9e-106 388.7 280 71.4
PSO384G5034 Papaver somniferum HOM05D002505 ORTHO05D007115 1.2e-104 384.0 359 56.3
Os10g0520700 Oryza sativa ssp. japonica HOM05D002505 ORTHO05D007115 4.6e-104 382.1 351 56.7
CDE11G0043 Ceratophyllum demersum HOM05D002505 ORTHO05D007115 5.1e-103 378.6 355 56.1
THA.LOC104823623 Tarenaya hassleriana HOM05D002505 ORTHO05D007115 7.4e-102 374.8 352 55.7
Zm00001eb021220 Zea mays HOM05D002505 ORTHO05D007115 9.7e-102 374.4 350 54.3
Aa31LG1G18070 Aethionema arabicum HOM05D002505 ORTHO05D007115 1.8e-100 370.2 360 54.4
ATR0757G152 Amborella trichopoda HOM05D002505 ORTHO05D007115 5.0e-98 362.1 358 53.9
Carub.0008s2460 Capsella rubella HOM05D002505 ORTHO05D007115 1.1e-97 360.9 358 53.6
Sp2g26890 Schrenkiella parvula HOM05D002505 ORTHO05D007115 4.6e-96 355.5 358 54.2
A06p30440 Brassica napus HOM05D002505 ORTHO05D007115 3.9e-95 352.4 359 53.2
CARHR277730 Cardamine hirsuta HOM05D002505 ORTHO05D007115 1.5e-94 350.5 360 53.1
C03p62620 Brassica napus HOM05D002505 ORTHO05D007115 4.3e-94 349.0 358 53.1
BolC3t18519H Brassica oleracea HOM05D002505 ORTHO05D007115 7.4e-94 348.2 358 53.1
AL8G41060 Arabidopsis lyrata HOM05D002505 ORTHO05D007115 1.7e-93 347.1 358 52.2
BraA06t25993Z Brassica rapa HOM05D002505 ORTHO05D007115 2.2e-93 346.7 359 52.4
BcaC01g02620 Brassica carinata HOM05D002505 ORTHO05D007115 2.4e-92 343.2 329 55.3
HPP92_022335 Vanilla planifolia HOM05D002505 ORTHO05D007115 5.3e-92 342.0 404 46.3
AT5G63830 Arabidopsis thaliana HOM05D002505 ORTHO05D007115 1.2e-91 340.9 358 51.7
HPP92_022360 Vanilla planifolia HOM05D002505 ORTHO05D007115 3.4e-91 339.3 417 45.3
Sc22g0004750 Simmondsia chinensis HOM05D002505 ORTHO05D007115 1.3e-90 337.4 265 63.4
SEGI_04382 Sequoiadendron giganteum HOM05D002505 ORTHO05D007115 2.9e-90 336.3 378 48.1
vmacro04587 Vaccinium macrocarpon HOM05D002505 ORTHO05D007115 2.0e-86 323.6 351 55.3
Thhalv10004334m.g Eutrema salsugineum HOM05D002505 ORTHO05D007115 3.3e-86 322.8 360 50.6
Hma1.2p1_0456F.1_g156510 Hydrangea macrophylla HOM05D002505 ORTHO05D007115 4.8e-85 318.9 223 73.5
RcHm_v2.0_Chr7g0184121 Rosa chinensis HOM05D002505 ORTHO05D007115 1.6e-75 287.3 198 72.2
FAN13G3213 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.3e-74 284.3 192 74.0
RhsimUnG0115700 Rhododendron simsii HOM05D002505 ORTHO05D007115 2.6e-70 270.0 285 52.6
Potri.001G085800 Populus trichocarpa HOM05D002505 ORTHO05D007115 3.8e-66 256.1 184 68.5
Pp3c16_17440 Physcomitrium patens HOM05D002505 ORTHO05D007115 1.1e-65 254.6 374 39.0
Mapoly0049s0078 Marchantia polymorpha HOM05D002505 ORTHO05D007115 1.5e-65 254.2 415 36.9
SMO348G0019 Selaginella moellendorffii HOM05D002505 ORTHO05D007115 5.5e-65 252.3 332 41.6
AagrBONN_evm.TU.Sc2ySwM_368.1194 Anthoceros agrestis HOM05D002505 ORTHO05D007115 1.2e-62 244.6 312 43.9
SEGI_16855 Sequoiadendron giganteum HOM05D002505 ORTHO05D007115 4.2e-57 226.1 266 47.4
Medtr1g090530 Medicago truncatula HOM05D002505 ORTHO05D007115 1.2e-54 218.0 234 50.4
Atru.chr5.483 Acer truncatum HOM05D002505 ORTHO05D007115 2.7e-43 180.3 132 66.7
FvH4_5g11280 Fragaria vesca HOM05D002505 ORTHO05D007115 1.5e-41 174.5 262 41.2
CBR_g20449 Chara braunii HOM05D002505 ORTHO05D007115 2.0e-38 164.1 320 32.2
FAN05G1175 Fragaria x ananassa HOM05D002505 ORTHO05D007115 5.8e-38 162.5 116 71.6
Atru.chr5.482 Acer truncatum HOM05D002505 ORTHO05D007115 9.2e-36 155.2 94 77.7
FAN14G3314 Fragaria x ananassa HOM05D002505 ORTHO05D007115 1.0e-34 151.8 153 52.9
SMO285G0002 Selaginella moellendorffii HOM05D002505 ORTHO05D007115 2.3e-34 150.6 314 32.2
Actinidia04163 Actinidia chinensis HOM05D002436 ORTHO05D002754 1.1e-33 148.3 170 50.6
MCO07G240 Micromonas commoda HOM05D002505 ORTHO05D007115 2.3e-26 124.0 361 27.7
RcHm_v2.0_Chr7g0184131 Rosa chinensis HOM05D002505 ORTHO05D007115 4.3e-25 119.8 81 74.1
Rhsim10G0016900 Rhododendron simsii HOM05D000068 ORTHO05D004691 9.2e-20 102.1 72 73.6
Oeu004999.3 Olea europaea HOM05D002505 ORTHO05D007115 2.1e-19 100.9 134 42.5
Zm00001eb044440 Zea mays HOM05D002505 ORTHO05D007115 3.3e-17 93.6 94 54.3
FvH4_3g32050 Fragaria vesca HOM05D002505 ORTHO05D045879 2.2e-13 80.9 46 80.4
CSS0027773 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.3e-10 71.6 41 85.4
Cre08.g379050 Chlamydomonas reinhardtii HOM05D002505 ORTHO05D007115 6.6e-10 69.3 148 31.8
BraA06t26113Z Brassica rapa HOM05D005837 ORTHO05D007594 1.6e-08 64.7 112 40.2
SMO348G0061 Selaginella moellendorffii HOM05D002505 ORTHO05D007115 3.1e-07 60.5 155 29.0
HanXRQChr03g0061211 Helianthus annuus HOM05D002505 ORTHO05D007115 6.9e-07 59.3 81 39.5


User provided reference genes

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