Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.8e-169 599.4 342 100.0
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 4.1e-158 561.6 341 94.1
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 2.1e-154 549.3 341 85.9
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 1.2e-149 533.5 340 89.1
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 8.6e-148 527.3 341 87.4
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 9.5e-147 523.9 341 86.8
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 4.7e-146 521.5 341 80.6
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 6.2e-146 521.2 342 81.9
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 8.1e-146 520.8 342 80.7
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.4e-145 520.0 341 80.1
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 2.0e-144 516.2 343 80.5
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 9.9e-144 513.8 342 80.4
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.2e-142 508.8 340 85.3
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 1.7e-140 503.1 341 78.6
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 5.1e-140 501.5 340 81.8
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 1.1e-139 500.4 341 78.9
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.5e-139 500.0 336 86.3
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 1.9e-139 499.6 341 84.8
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 1.2e-138 496.9 341 80.9
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 1.2e-138 496.9 342 81.9
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 4.7e-138 495.0 339 82.6
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 6.2e-138 494.6 341 82.4
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 6.2e-138 494.6 338 77.5
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 8.1e-138 494.2 341 77.1
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.8e-137 493.0 341 75.1
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 2.4e-137 492.7 341 75.4
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 3.1e-137 492.3 341 76.5
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 3.1e-137 492.3 341 77.7
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 7.6e-136 487.6 341 75.1
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 7.6e-136 487.6 340 74.7
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 9.9e-136 487.3 321 79.1
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 1.3e-135 486.9 341 82.7
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 2.2e-135 486.1 340 82.6
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 2.2e-135 486.1 329 84.2
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 2.9e-135 485.7 340 77.6
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.9e-134 483.0 338 82.2
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 5.4e-134 481.5 338 81.4
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 7.1e-134 481.1 338 81.7
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 2.1e-133 479.6 340 79.7
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 7.8e-133 477.6 340 77.1
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 1.3e-132 476.9 341 75.7
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 1.3e-132 476.9 338 81.1
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 2.3e-132 476.1 337 78.9
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 8.6e-132 474.2 340 71.2
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 8.6e-132 474.2 340 75.6
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 1.9e-131 473.0 352 79.8
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 4.3e-131 471.9 340 80.3
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 9.6e-131 470.7 340 70.3
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.2e-130 470.3 341 80.4
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 6.2e-130 468.0 342 74.6
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 8.1e-130 467.6 341 78.3
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 1.8e-129 466.5 341 78.0
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 9.0e-129 464.2 344 73.3
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 4.4e-128 461.8 318 83.6
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 7.6e-128 461.1 342 72.8
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 9.9e-128 460.7 334 71.9
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.8e-127 458.8 340 79.1
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.9e-126 456.4 340 77.1
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 5.4e-126 454.9 362 69.3
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 2.7e-125 452.6 334 72.2
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 3.5e-125 452.2 420 61.9
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 6.6e-124 448.0 340 72.1
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 4.3e-123 445.3 334 75.1
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 3.6e-122 442.2 340 70.9
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 3.6e-122 442.2 342 68.7
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 4.8e-122 441.8 315 76.2
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 6.2e-122 441.4 379 67.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 8.1e-122 441.0 341 71.6
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 2.4e-121 439.5 340 70.9
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 2.4e-121 439.5 340 70.9
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 2.4e-121 439.5 340 70.9
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 5.3e-121 438.3 338 77.2
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 2.6e-120 436.0 364 75.0
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 5.8e-120 434.9 356 68.3
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 6.4e-119 431.4 356 68.3
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 6.4e-119 431.4 327 77.1
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 8.4e-119 431.0 360 70.6
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 2.4e-118 429.5 283 79.9
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 3.2e-118 429.1 341 70.4
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 1.2e-117 427.2 293 82.6
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 2.1e-117 426.4 337 74.8
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 3.5e-117 425.6 331 68.0
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 2.3e-116 422.9 398 65.8
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 3.0e-116 422.5 341 67.2
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 3.9e-116 422.2 337 67.1
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 8.7e-116 421.0 336 67.0
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 8.7e-116 421.0 336 67.0
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.3e-115 419.1 341 66.9
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 3.3e-115 419.1 322 70.5
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 7.4e-115 417.9 341 68.6
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 9.6e-115 417.5 341 66.3
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 4.8e-114 415.2 341 66.3
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 4.8e-114 415.2 340 74.4
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 8.1e-114 414.5 293 74.4
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.8e-113 413.3 326 69.0
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 2.4e-113 412.9 384 69.8
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 7.1e-110 401.4 340 72.1
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 6.0e-109 398.3 302 80.5
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 1.5e-107 393.7 336 62.8
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 7.6e-104 381.3 260 85.0
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 4.9e-103 378.6 281 81.1
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 6.5e-103 378.3 395 57.7
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 4.6e-101 372.1 248 77.8
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 1.1e-99 367.5 292 68.2
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.9e-99 366.7 334 65.3
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 3.7e-98 362.5 290 68.6
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 1.9e-94 350.1 229 78.6
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 2.7e-93 346.3 435 49.2
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 5.1e-92 342.0 335 56.4
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 8.2e-90 334.7 405 53.3
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 1.4e-89 334.0 246 81.7
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 2.5e-86 323.2 253 72.3
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 2.7e-85 319.7 235 74.5
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.0e-83 313.5 235 74.5
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 6.5e-79 298.5 223 71.3
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 6.5e-79 298.5 240 71.2
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 6.7e-76 288.5 204 73.0
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 1.1e-73 281.2 223 67.3
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 4.1e-73 279.3 302 55.6
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 4.1e-73 279.3 238 62.2
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 1.0e-68 264.6 185 82.7
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.6e-64 250.8 332 44.9
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 5.9e-64 248.8 324 43.5
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.6e-61 239.6 148 82.4
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 2.3e-60 236.9 338 41.4
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.1e-49 199.5 129 79.1
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 1.0e-47 194.9 145 67.6
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 5.6e-46 189.1 157 77.7
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 1.2e-43 181.4 130 77.7
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 6.4e-42 175.6 196 53.1
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 2.3e-36 157.1 111 98.2
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 5.6e-30 136.0 321 31.5
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 2.3e-28 130.6 182 47.3
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.9e-25 120.9 97 72.2
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.4e-25 119.4 94 71.3
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 1.9e-22 110.9 97 86.6
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 4.3e-22 109.8 78 73.1
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 4.7e-21 106.3 218 33.9
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 6.2e-21 105.9 98 56.1
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 9.2e-17 92.0 50 86.0
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 4.3e-14 83.2 53 81.1
arahy.Tifrunner.gnm1.ann1.S4WZ34 Arachis hypogaea HOM05D000237 ORTHO05D017465 4.7e-13 79.7 57 63.2
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 1.4e-12 78.2 73 58.9
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 1.3e-10 71.6 72 50.0
arahy.Tifrunner.gnm1.ann1.WCUD5S Arachis hypogaea HOM05D000237 ORTHO05D017465 8.4e-10 68.9 56 58.9
arahy.Tifrunner.gnm1.ann1.9B3XF4 Arachis hypogaea HOM05D000237 ORTHO05D017465 3.2e-09 67.0 47 66.0
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 2.7e-08 63.9 37 86.5
arahy.Tifrunner.gnm1.ann1.2X24PF Arachis hypogaea HOM05D002335 ORTHO05D006282 3.3e-06 57.0 55 54.5
FvH4_1g08700 Fragaria vesca HOM05D000069 ORTHO05D021424 4.3e-06 56.6 44 63.6


User provided reference genes

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