Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 2.8e-236 821.6 433 100.0
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 2.1e-130 469.9 337 77.4
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 8.4e-124 448.0 346 73.1
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.3e-121 440.7 374 68.4
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.1e-120 437.6 365 70.4
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.9e-120 436.8 347 72.3
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.7e-119 432.6 372 65.9
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 4.8e-119 432.2 372 66.1
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.1e-118 431.0 347 69.2
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.4e-118 430.6 343 70.6
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.3e-118 428.7 346 68.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 6.9e-118 428.3 346 69.1
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 9.0e-118 427.9 372 67.7
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 2.9e-116 422.9 389 65.6
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.1e-115 421.0 308 77.6
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 1.4e-115 420.6 349 69.6
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 7.1e-115 418.3 346 67.6
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 2.1e-114 416.8 346 69.1
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.1e-114 416.8 349 68.8
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 4.6e-114 415.6 308 77.3
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.0e-114 415.2 346 66.8
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.3e-113 413.3 346 66.5
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.3e-112 409.5 346 66.5
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 5.7e-112 408.7 364 67.0
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 9.6e-112 407.9 347 66.6
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 2.8e-111 406.4 362 65.7
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 6.2e-111 405.2 346 66.8
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.1e-110 404.4 349 70.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 9.0e-110 401.4 369 61.2
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 4.5e-109 399.1 346 64.7
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.0e-108 397.9 372 60.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.0e-108 397.9 356 63.8
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.9e-108 396.4 349 63.3
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 5.0e-108 395.6 369 62.9
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.2e-107 392.9 326 67.2
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 7.1e-107 391.7 358 62.6
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 9.3e-107 391.3 346 67.3
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.1e-106 390.2 363 62.0
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 7.9e-106 388.3 349 62.5
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.3e-105 387.5 364 64.0
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.8e-105 387.1 349 62.5
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.8e-105 387.1 366 66.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.3e-105 386.7 377 61.8
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.1e-104 384.4 371 59.6
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.5e-104 384.0 371 59.3
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.9e-104 383.6 368 63.6
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 9.7e-104 381.3 350 63.4
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 6.9e-102 375.2 323 68.1
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 2.0e-101 373.6 369 58.3
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 2.6e-101 373.2 363 60.3
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 2.6e-101 373.2 382 59.9
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.7e-100 370.5 369 57.7
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.7e-100 370.5 369 57.7
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.2e-100 370.2 387 58.1
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 3.8e-100 369.4 410 56.3
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.1e-99 367.9 369 57.5
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 5.5e-99 365.5 302 67.9
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 9.4e-99 364.8 349 61.0
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 7.4e-96 355.1 355 58.6
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 9.7e-96 354.8 375 55.7
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.2e-95 353.6 370 59.2
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.2e-95 353.6 353 60.1
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.2e-95 353.6 372 59.4
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 2.2e-95 353.6 359 58.5
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 6.3e-95 352.1 361 58.2
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 4.1e-94 349.4 339 61.9
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 2.6e-93 346.7 370 57.0
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.0e-92 344.7 370 58.4
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 2.5e-91 340.1 344 58.7
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 9.4e-91 338.2 309 65.0
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.6e-90 336.3 364 58.8
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 8.8e-89 331.6 362 56.1
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 7.4e-88 328.6 371 52.8
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.2e-87 327.0 362 55.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.8e-87 326.6 384 57.0
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 3.7e-87 326.2 376 52.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.8e-87 325.9 359 58.5
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.8e-86 323.9 337 59.6
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 2.0e-85 320.5 311 62.7
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.9e-83 313.9 363 53.4
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.2e-82 311.2 346 54.9
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.6e-82 310.8 384 53.4
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 2.1e-82 310.5 378 55.0
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.1e-82 310.5 341 54.8
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.7e-82 310.1 376 52.1
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.3e-81 307.0 372 54.3
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 2.2e-79 300.4 383 51.7
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.1e-78 298.1 413 49.4
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 4.1e-78 296.2 348 51.7
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.7e-74 283.5 348 49.7
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 9.8e-72 275.0 279 62.0
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 6.3e-71 272.3 348 51.7
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.0e-68 265.0 324 52.8
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 5.2e-57 226.1 170 73.5
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.2e-56 224.9 283 48.4
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 1.2e-56 224.9 375 43.5
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 5.7e-56 222.6 257 56.0
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 6.3e-55 219.2 231 59.3
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.3e-52 211.5 331 44.4
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.3e-52 211.5 193 64.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.9e-52 209.9 295 45.1
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.5e-51 207.2 393 39.9
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.6e-51 206.1 290 47.9
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.4e-41 174.9 181 53.0
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 5.8e-40 169.5 354 38.1
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.4e-38 164.9 129 71.3
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.4e-38 164.1 161 56.5
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 4.9e-31 139.8 196 50.0
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 8.1e-26 122.5 170 50.6
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.4e-25 120.9 170 50.0
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.1e-22 112.1 70 87.1
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.3e-20 104.4 148 49.3
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 5.1e-20 103.2 62 85.5
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 3.8e-15 87.0 314 30.3
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.4e-14 85.1 67 70.1
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.4e-14 85.1 305 33.4
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 2.4e-14 84.3 87 62.1
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.4e-09 68.6 36 83.3
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 3.8e-07 60.5 285 28.8
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 9.3e-06 55.8 35 62.9


User provided reference genes

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