Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 0.0e+00 1763.4 889 100.0
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 3.3e-114 417.2 540 48.7
Dinv25442 Davidia involucrata HOM05D008239 ORTHO05D180046 2.5e-82 311.2 195 83.1
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-76 289.7 240 69.2
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-48 199.5 764 28.9
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-44 185.3 930 25.7
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-38 165.6 902 24.1
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 3.2e-37 161.4 544 27.0
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 3.2e-37 161.4 472 31.1
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 3.1e-32 144.8 433 28.6
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 7.0e-32 143.7 302 34.8
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-31 142.9 456 27.9
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.9e-30 138.3 768 23.6
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 1.2e-28 132.9 328 30.2
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-27 129.8 480 26.9
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 2.3e-27 128.6 297 31.0
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 8.8e-27 126.7 311 29.6
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 1.2e-26 126.3 324 29.0
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 5.7e-26 124.0 479 26.7
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 6.3e-25 120.6 343 29.2
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 1.8e-24 119.0 329 28.0
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 2.4e-24 118.6 279 29.4
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 7.0e-24 117.1 461 27.8
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.9e-22 111.7 323 27.2
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 5.0e-22 110.9 471 26.3
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 3.2e-21 108.2 331 27.5
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 6.8e-19 100.5 410 27.6
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 2.0e-18 99.0 303 28.1
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 3.4e-18 98.2 469 24.7
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.7e-18 97.4 342 28.7
COL.COLO4_12089 Corchorus olitorius HOM05D008239 ORTHO05D009800 2.8e-17 95.1 282 33.7
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 2.4e-16 92.0 257 28.8
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 4.1e-16 91.3 380 25.8
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 4.5e-15 87.8 339 25.4
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-14 85.5 251 26.7
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 3.2e-13 81.6 175 34.9
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 4.2e-13 81.3 140 34.3
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 9.5e-13 80.1 174 32.2
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 1.6e-12 79.3 150 36.0
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.6e-12 79.3 194 28.4
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 2.7e-12 78.6 263 30.8
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 2.7e-12 78.6 255 23.9
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.0e-11 76.6 263 25.5
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.4e-11 76.3 264 25.0
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 2.3e-11 75.5 272 25.7
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 6.8e-11 73.9 248 26.2
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 8.8e-11 73.6 300 24.0
Rhsim13G0234400 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.2e-10 73.2 289 26.0
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-10 72.8 222 26.6
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.0e-10 72.4 280 25.7
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.6e-10 72.0 280 25.7
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 4.4e-10 71.2 544 22.6
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.7e-10 70.9 240 31.7
TAR622G0243 Trochodendron aralioides HOM05D007472 ORTHO05D009477 5.7e-10 70.9 231 29.0
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 9.8e-10 70.1 133 33.8
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.8e-09 68.6 339 23.0
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.9e-09 67.8 264 23.5
Dinv20749 Davidia involucrata HOM05D018862 ORTHO05D009800 5.4e-08 64.3 273 24.5
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 1.2e-07 63.2 210 27.1
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 1.2e-07 63.2 263 22.8
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 2.0e-07 62.4 324 23.5
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.5e-07 61.2 301 22.9
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 1.3e-06 59.7 236 26.3
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 1.3e-06 59.7 317 23.7
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 1.3e-06 59.7 317 23.7
COL.COLO4_27100 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.0e-06 57.8 119 36.1
COL.COLO4_24278 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.6e-06 57.4 217 24.9


User provided reference genes

Program Settings