Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25287 Davidia involucrata HOM05D008564 ORTHO05D010893 1.4e-119 433.0 213 100.0
Hma1.2p1_2300F.1_g319270 Hydrangea macrophylla HOM05D008564 ORTHO05D010893 3.2e-44 182.6 221 52.9
Hma1.2p1_1857F.1_g305470 Hydrangea macrophylla HOM05D008564 ORTHO05D010893 9.1e-39 164.5 203 50.2
QL07p033572 Quercus lobata HOM05D008564 ORTHO05D010893 3.4e-33 146.0 209 46.9
Sabra16G0129300 Salix brachista HOM05D008564 ORTHO05D010893 1.8e-31 140.2 204 44.6
ClCG10G022540 Citrullus lanatus HOM05D008564 ORTHO05D010893 2.0e-30 136.7 205 42.4
MELO3C009121.2 Cucumis melo HOM05D008564 ORTHO05D010893 2.0e-30 136.7 205 42.4
CsaV3_3G033290 Cucumis sativus L. HOM05D008564 ORTHO05D010893 2.9e-29 132.9 205 42.0
Thecc.05G004400 Theobroma cacao HOM05D008564 ORTHO05D010893 2.8e-27 126.3 210 41.9
Gohir.D01G220600 Gossypium hirsutum HOM05D008564 ORTHO05D010893 6.8e-26 121.7 207 36.2
Gorai.002G267200 Gossypium raimondii HOM05D008564 ORTHO05D010893 6.8e-26 121.7 207 36.2
Potri.016G129400 Populus trichocarpa HOM05D008564 ORTHO05D010893 2.0e-25 120.2 211 41.2
Prupe.6G286800 Prunus persica HOM05D008564 ORTHO05D010893 2.6e-25 119.8 205 39.0
Oeu023746.1 Olea europaea HOM05D008564 ORTHO05D010893 4.9e-24 115.5 167 40.7
Ciclev10013769m.g Citrus clementina HOM05D008564 ORTHO05D010893 1.8e-23 113.6 204 38.7
Atru.chr8.2355 Acer truncatum HOM05D008564 ORTHO05D010893 6.6e-21 105.1 146 46.6
MD12G1182100 Malus domestica HOM05D008564 ORTHO05D010893 8.6e-21 104.8 205 34.6
Nitab4.5_0000047g0100 Nicotiana tabacum HOM05D008564 ORTHO05D010893 2.5e-20 103.2 212 39.2
Cpa.g.sc33.105 Carica papaya HOM05D008564 ORTHO05D010893 7.3e-20 101.7 198 38.4
MD04G1168500 Malus domestica HOM05D008564 ORTHO05D010893 1.2e-19 100.9 214 34.6
RcHm_v2.0_Chr3g0461071 Rosa chinensis HOM05D008564 ORTHO05D010893 1.2e-19 100.9 179 39.1
Nitab4.5_0008225g0010 Nicotiana tabacum HOM05D008564 ORTHO05D010893 2.1e-19 100.1 217 37.8
Haze_21133 Corylus avellana HOM05D008564 ORTHO05D010893 8.0e-19 98.2 118 51.7
Haze_21136 Corylus avellana HOM05D008564 ORTHO05D010893 8.0e-19 98.2 118 51.7
COL.COLO4_14432 Corchorus olitorius HOM05D008564 ORTHO05D010893 1.8e-18 97.1 205 40.0
Solyc09g014950.2 Solanum lycopersicum HOM05D008564 ORTHO05D010893 2.3e-18 96.7 201 36.8
Peaxi162Scf00744g00222 Petunia axillaris HOM05D008564 ORTHO05D010893 8.3e-16 88.2 204 37.3
FAN09G0205 Fragaria x ananassa HOM05D008564 ORTHO05D010893 1.1e-15 87.8 223 33.2
FvH4_6g10310 Fragaria vesca HOM05D008564 ORTHO05D010893 1.9e-15 87.0 189 35.4
Lj2C65T2 Lonicera japonica HOM05D008564 ORTHO05D010893 4.1e-15 85.9 155 41.9
Medtr7g071570 Medicago truncatula HOM05D018045 ORTHO05D010893 3.0e-13 79.7 117 45.3
FAN05G1300 Fragaria x ananassa HOM05D008564 ORTHO05D010893 7.3e-12 75.1 202 31.2
PGSC0003DMG400026611 Solanum tuberosum HOM05D008564 ORTHO05D010893 2.1e-11 73.6 125 40.0
FAN05G2277 Fragaria x ananassa HOM05D008564 ORTHO05D010893 2.8e-11 73.2 207 30.4
FAN02G3455 Fragaria x ananassa HOM05D008564 ORTHO05D010893 8.1e-11 71.6 220 29.5
Psat0s1482g0160 Pisum sativum HOM05D018045 ORTHO05D010893 2.3e-10 70.1 114 41.2
Glyma.18G209300 Glycine max HOM05D018045 ORTHO05D010893 3.1e-10 69.7 122 36.9
Rhsim05G0227100 Rhododendron simsii HOM05D008564 ORTHO05D010893 1.5e-09 67.4 145 35.2
Glyma.09G279701 Glycine max HOM05D018045 ORTHO05D010893 5.8e-09 65.5 156 34.0
AUR62026357 Chenopodium quinoa HOM05D000182 ORTHO05D000112 1.9e-07 60.5 104 38.5
Lalb_Chr01g0023491 Lupinus albus HOM05D018045 ORTHO05D010893 7.8e-06 55.1 121 41.3


User provided reference genes

Program Settings