Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25219 Davidia involucrata HOM05D008363 ORTHO05D010508 1.2e-89 333.2 167 100.0
Dinv28961 Davidia involucrata HOM05D008363 ORTHO05D010508 2.8e-43 179.1 222 47.3
Actinidia14803 Actinidia chinensis HOM05D008363 ORTHO05D010508 1.9e-36 156.4 240 40.4
Hma1.2p1_0303F.1_g119070 Hydrangea macrophylla HOM05D008363 ORTHO05D010508 2.4e-34 149.4 222 41.4
TAR636G2722 Trochodendron aralioides HOM05D008363 ORTHO05D010508 2.2e-32 142.9 237 38.4
TAR633G2165 Trochodendron aralioides HOM05D008363 ORTHO05D010508 3.8e-32 142.1 198 42.9
CSS0023279 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 7.9e-30 134.4 209 42.6
CSS0031173 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 7.9e-30 134.4 209 42.6
Aqoxy5G00023 Aquilegia oxysepala HOM05D008363 ORTHO05D010508 3.4e-25 119.0 206 35.4
Ciclev10023626m.g Citrus clementina HOM05D008363 ORTHO05D010508 7.7e-25 117.9 224 35.3
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 1.0e-24 117.5 215 36.3
Haze_08219 Corylus avellana HOM05D008363 ORTHO05D010508 1.1e-23 114.0 141 49.6
Cpa.g.sc227.8 Carica papaya HOM05D008363 ORTHO05D010508 1.4e-23 113.6 211 37.9
COL.COLO4_17025 Corchorus olitorius HOM05D008363 ORTHO05D010508 2.7e-22 109.4 203 35.0
Thecc.03G227000 Theobroma cacao HOM05D008363 ORTHO05D010508 4.7e-22 108.6 204 35.8
Gohir.A03G000300 Gossypium hirsutum HOM05D008363 ORTHO05D010508 1.0e-21 107.5 211 36.0
Gohir.D03G171900 Gossypium hirsutum HOM05D008363 ORTHO05D010508 1.4e-21 107.1 223 35.0
TWI60G0018 Tripterygium wilfordii HOM05D008363 ORTHO05D010508 1.4e-21 107.1 201 36.3
Duzib084G1116 Durio zibethinus HOM05D008363 ORTHO05D010508 3.0e-21 105.9 227 33.9
MBI18_g13989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.2e-21 105.1 104 51.0
Cfa012447 Carpinus fangiana HOM05D000816 ORTHO05D010508 1.5e-20 103.6 140 50.0
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.4e-20 102.1 210 32.9
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 7.4e-20 101.3 210 32.9
Ciclev10013884m.g Citrus clementina HOM05D008363 ORTHO05D010508 1.3e-19 100.5 183 35.0
DCAR_005636 Daucus carota HOM05D008363 ORTHO05D010508 1.7e-19 100.1 208 32.7
Cc08_g02830 Coffea canephora HOM05D008363 ORTHO05D010508 2.8e-19 99.4 218 34.9
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 3.7e-19 99.0 210 32.4
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 3.7e-19 99.0 209 31.6
Oeu006320.1 Olea europaea HOM05D008363 ORTHO05D010508 6.3e-19 98.2 229 33.2
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 8.2e-19 97.8 210 31.9
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.1e-18 97.4 210 31.9
Manes.15G182300 Manihot esculenta HOM05D008363 ORTHO05D010508 5.3e-18 95.1 215 32.6
Duzib205G1194 Durio zibethinus HOM05D008363 ORTHO05D010508 1.2e-17 94.0 204 31.9
Migut.A01011 Erythranthe guttata HOM05D008363 ORTHO05D010508 1.2e-17 94.0 228 31.1
Psat2g136320 Pisum sativum HOM05D008363 ORTHO05D010508 2.0e-17 93.2 209 27.8
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 3.5e-17 92.4 228 31.1
Ca_06083_v3 Cicer arietinum L. HOM05D008363 ORTHO05D010508 5.9e-17 91.7 187 31.0
DCAR_024961 Daucus carota HOM05D008363 ORTHO05D010508 1.0e-16 90.9 215 33.5
Manes.05G195161 Manihot esculenta HOM05D008363 ORTHO05D010508 1.3e-16 90.5 234 28.2
Potri.014G146500 Populus trichocarpa HOM05D008363 ORTHO05D010508 6.5e-16 88.2 242 31.4
Glyma.09G204700 Glycine max HOM05D008363 ORTHO05D010508 4.2e-15 85.5 207 30.0
CsaV3_3G001670 Cucumis sativus L. HOM05D008363 ORTHO05D010508 4.4e-12 75.5 171 29.8
PGR042G3791 Punica granatum HOM05D008363 ORTHO05D010508 1.3e-11 73.9 62 54.8
Duzib084G0653 Durio zibethinus HOM05D008363 ORTHO05D010508 2.8e-11 72.8 173 33.5
ECA240G1797 Erigeron canadensis HOM05D002571 ORTHO05D002868 3.7e-11 72.4 164 32.9
Potri.001G141900 Populus trichocarpa HOM05D008363 ORTHO05D010508 3.1e-10 69.3 83 45.8
Lsat_1_v5_gn_6_79301 Lactuca sativa HOM05D008363 ORTHO05D010508 1.2e-09 67.4 173 31.8
DCAR_008265 Daucus carota HOM05D008363 ORTHO05D010508 2.0e-09 66.6 140 31.4
CANSAT21G1194 Cannabis sativa HOM05D008363 ORTHO05D010508 2.7e-09 66.2 178 26.4
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 2.1e-06 56.6 60 40.0
Sopen08g025470 Solanum pennellii HOM05D008363 ORTHO05D010508 3.6e-06 55.8 56 51.8


User provided reference genes

Program Settings