Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 1.0e-210 736.5 370 100.0
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 4.3e-169 598.2 323 91.6
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 2.6e-158 562.4 335 83.3
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 8.4e-157 557.4 350 81.7
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 4.2e-156 555.1 360 77.8
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 5.6e-153 544.7 333 82.3
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 1.3e-152 543.5 330 81.5
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 2.8e-152 542.3 316 85.1
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 1.1e-151 540.4 325 84.6
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 2.6e-150 535.8 322 82.9
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 4.5e-150 535.0 312 84.9
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 5.8e-150 534.6 317 83.6
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 5.8e-150 534.6 322 82.6
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 6.5e-149 531.2 322 82.9
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 1.6e-147 526.6 359 73.8
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 1.3e-146 523.5 351 75.8
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 3.9e-146 521.9 357 73.4
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 3.3e-145 518.8 321 81.9
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 4.3e-145 518.5 358 73.2
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 1.6e-144 516.5 350 75.4
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 2.1e-144 516.2 332 77.7
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 2.8e-144 515.8 336 77.1
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 4.8e-144 515.0 355 72.7
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 6.2e-144 514.6 363 72.2
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 4.0e-143 511.9 350 74.9
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 4.0e-143 511.9 318 81.1
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 1.2e-142 510.4 321 79.1
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.0e-141 507.3 414 65.7
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 1.0e-141 507.3 321 79.4
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 2.2e-141 506.1 342 74.6
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 3.8e-141 505.4 321 79.1
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 6.5e-141 504.6 326 78.2
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 6.5e-141 504.6 324 77.8
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.4e-140 503.4 321 79.8
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 2.5e-140 502.7 342 75.7
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.5e-140 502.7 355 71.5
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 5.5e-140 501.5 316 79.4
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 5.5e-140 501.5 355 72.7
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 2.1e-139 499.6 352 72.4
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.5e-139 498.8 335 74.0
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 1.8e-138 496.5 316 78.5
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 2.3e-138 496.1 324 75.9
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 2.3e-138 496.1 323 75.2
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 3.0e-138 495.7 322 74.8
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 1.1e-137 493.8 264 91.3
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 7.4e-137 491.1 351 73.2
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 1.3e-136 490.3 327 74.9
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 2.2e-136 489.6 315 78.4
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 8.2e-136 487.6 329 72.6
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 8.2e-136 487.6 313 78.6
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 2.4e-135 486.1 330 74.8
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 9.0e-135 484.2 321 75.4
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 1.5e-134 483.4 324 75.9
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 2.0e-134 483.0 329 73.9
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 2.0e-134 483.0 329 73.9
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 1.0e-133 480.7 330 71.2
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 1.7e-133 479.9 330 71.2
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 2.2e-133 479.6 309 78.3
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 5.0e-133 478.4 350 72.6
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 7.2e-132 474.6 296 82.1
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.0e-130 470.7 350 71.1
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 2.3e-130 469.5 322 73.9
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 3.9e-130 468.8 310 74.5
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 1.5e-129 466.8 336 69.9
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 3.3e-129 465.7 314 73.9
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 6.3e-128 461.5 331 70.4
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.4e-127 460.3 352 66.5
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 9.1e-127 457.6 281 79.4
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 2.6e-126 456.1 312 75.6
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 3.6e-123 445.7 334 69.2
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 4.7e-123 445.3 326 70.6
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 4.7e-123 445.3 318 70.8
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.4e-122 443.7 317 69.1
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 1.1e-121 440.7 318 68.6
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 5.7e-121 438.3 318 68.2
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 9.7e-121 437.6 317 68.5
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 9.7e-121 437.6 308 69.8
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 2.8e-120 436.0 318 67.9
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 6.3e-120 434.9 336 66.4
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 8.2e-120 434.5 336 66.1
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 1.1e-119 434.1 326 66.6
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 9.1e-119 431.0 336 65.8
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.2e-118 430.6 324 66.0
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.2e-118 430.6 277 76.5
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.5e-118 430.3 317 67.5
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.5e-118 430.3 318 67.9
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 5.9e-118 428.3 321 68.8
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.0e-117 427.6 334 68.9
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 9.4e-116 421.0 241 84.6
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 9.4e-116 421.0 342 60.8
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 2.7e-115 419.5 324 64.2
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 1.4e-114 417.2 312 67.9
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 4.4e-113 412.1 301 68.4
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 9.7e-113 411.0 288 75.0
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 1.4e-111 407.1 330 64.5
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 2.0e-110 403.3 265 74.3
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 7.7e-110 401.4 327 64.2
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 9.4e-108 394.4 336 62.2
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 4.2e-100 369.0 318 59.4
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 5.5e-100 368.6 324 63.6
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 2.0e-86 323.6 194 79.9
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 5.6e-60 235.7 244 56.6
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 9.0e-50 201.8 140 70.7
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 9.3e-47 191.8 217 51.2
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 9.3e-47 191.8 331 36.3
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 8.7e-45 185.3 252 45.2
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.1e-43 180.6 288 39.2
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 2.8e-43 180.3 308 39.0
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 5.3e-42 176.0 304 35.2
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 9.0e-42 175.3 304 37.2
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.3e-40 171.4 230 43.9
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 2.9e-40 170.2 137 62.8
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 2.9e-40 170.2 318 32.4
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 7.1e-31 139.0 138 55.8
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 5.1e-29 132.9 231 39.0
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 3.8e-24 116.7 77 74.0


User provided reference genes

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