Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 9.4e-231 803.1 394 100.0
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.5e-161 572.0 393 72.5
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 4.6e-161 571.6 394 71.1
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 3.0e-160 568.9 395 72.9
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.5e-159 566.6 395 72.7
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 1.6e-150 536.6 392 67.6
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 7.6e-148 527.7 378 69.6
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 1.1e-146 523.9 389 66.8
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 1.6e-145 520.0 394 65.7
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 7.9e-145 517.7 469 57.6
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 6.9e-141 504.6 368 67.4
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.6e-137 491.9 391 61.1
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 1.9e-135 486.5 392 62.5
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 7.4e-135 484.6 354 63.6
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.3e-134 483.8 402 59.5
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 2.8e-134 482.6 373 62.2
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.8e-133 479.9 390 61.3
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 2.4e-133 479.6 400 60.0
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 4.0e-133 478.8 398 59.3
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 9.0e-133 477.6 396 58.8
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 2.2e-131 473.0 396 60.9
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 2.2e-131 473.0 391 58.6
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 3.8e-131 472.2 397 57.4
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 8.4e-131 471.1 368 62.0
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 8.4e-131 471.1 387 60.7
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.9e-130 469.9 379 62.8
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 6.0e-129 464.9 386 58.8
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 3.9e-128 462.2 396 59.3
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 1.5e-127 460.3 387 59.4
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 2.5e-127 459.5 386 60.1
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 4.3e-127 458.8 366 64.5
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 4.1e-125 452.2 388 59.8
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 6.9e-125 451.4 369 59.6
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 7.9e-121 438.0 390 55.9
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 2.3e-120 436.4 395 57.5
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 5.1e-120 435.3 382 57.6
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 1.3e-118 430.6 390 57.9
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 3.7e-118 429.1 360 58.9
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 1.4e-117 427.2 400 55.0
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 3.1e-117 426.0 382 56.8
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 9.1e-117 424.5 372 55.6
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.5e-116 423.7 369 57.2
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 4.5e-116 422.2 385 55.8
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 5.9e-116 421.8 356 59.6
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.3e-115 420.6 341 61.0
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 1.3e-115 420.6 378 57.1
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 2.2e-115 419.9 359 57.7
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 2.9e-115 419.5 372 58.3
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.4e-114 417.2 337 57.9
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 2.7e-113 412.9 359 57.1
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 4.7e-113 412.1 351 58.1
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 6.1e-113 411.8 379 58.0
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 6.1e-113 411.8 360 57.2
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.4e-112 410.6 298 64.1
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 1.8e-112 410.2 377 56.0
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.8e-112 410.2 389 53.7
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 3.0e-112 409.5 393 53.2
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 1.1e-111 407.5 377 54.4
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 1.1e-111 407.5 389 53.2
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 1.1e-109 401.0 366 56.0
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 4.1e-109 399.1 382 56.3
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 9.1e-109 397.9 394 54.1
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 5.9e-108 395.2 387 51.7
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.0e-107 394.4 395 53.7
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 1.7e-107 393.7 364 53.6
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 2.2e-107 393.3 367 53.1
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 1.4e-106 390.6 374 53.7
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 1.9e-106 390.2 370 52.4
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 1.9e-106 390.2 355 54.1
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 3.2e-106 389.4 367 53.1
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 7.2e-106 388.3 367 53.1
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 7.2e-106 388.3 376 54.0
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 9.4e-106 387.9 381 52.8
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.2e-105 387.5 367 53.4
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 1.6e-105 387.1 354 55.4
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 6.1e-105 385.2 367 52.6
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 3.0e-104 382.9 354 53.7
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.1e-103 380.9 353 54.4
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 2.0e-103 380.2 383 52.0
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 9.1e-101 371.3 385 50.6
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 1.7e-99 367.1 373 51.7
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.1e-98 364.4 423 48.0
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 1.0e-96 357.8 332 52.7
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 8.8e-96 354.8 294 60.5
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 7.5e-95 351.7 489 40.9
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 5.0e-91 339.0 325 51.7
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 3.6e-89 332.8 257 61.5
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 3.0e-88 329.7 436 46.1
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 4.4e-87 325.9 250 64.0
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 1.4e-85 320.9 323 50.5
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 8.9e-80 301.6 330 47.3
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.7e-78 297.4 351 42.7
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 8.6e-75 285.0 277 50.9
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 8.0e-73 278.5 299 52.2
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 1.2e-71 274.6 219 60.7
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 6.6e-67 258.8 160 78.8
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 8.6e-67 258.5 246 52.4
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 1.5e-66 257.7 191 67.0
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 4.1e-61 239.6 246 49.2
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.5e-60 236.5 201 58.7
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 1.5e-58 231.1 363 36.6
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 2.6e-55 220.3 305 40.0
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 7.5e-55 218.8 361 36.3
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.5e-52 209.9 339 38.1
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.8e-48 197.6 132 76.5
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 2.5e-42 177.2 227 43.6
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 8.1e-41 172.2 138 64.5
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.2e-37 159.8 249 37.3
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 2.1e-36 157.5 129 54.3
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 3.6e-33 146.7 246 34.1
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 3.4e-31 140.2 184 41.8
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 1.4e-29 134.8 281 31.0
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 7.9e-28 129.0 196 35.7
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 9.9e-23 112.1 92 51.1
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.3e-22 111.7 85 51.8
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.3e-19 100.9 74 55.4
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.3e-18 97.1 71 54.9
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 7.4e-18 95.9 108 43.5
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.8e-14 83.6 93 50.5
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.8e-14 83.6 93 50.5
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.4e-13 81.6 93 49.5
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.9e-13 81.3 93 49.5
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 1.8e-11 74.7 111 39.6
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 2.2e-06 57.8 58 53.4


User provided reference genes

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