Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 4.5e-214 747.7 377 100.0
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 1.2e-179 633.3 400 82.0
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.8e-170 602.8 401 77.3
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 6.8e-170 600.9 401 77.1
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.2e-169 600.1 401 76.6
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.0e-169 599.4 401 77.1
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 7.5e-169 597.4 401 76.3
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 2.4e-167 592.4 401 76.6
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 1.5e-164 583.2 402 75.1
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 4.2e-164 581.6 401 75.6
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 9.4e-164 580.5 401 75.6
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 2.1e-163 579.3 416 73.3
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 3.6e-163 578.6 402 74.9
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 1.4e-162 576.6 401 75.3
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.8e-162 576.2 400 75.8
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 2.8e-160 568.9 399 74.2
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 1.1e-159 567.0 403 73.2
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 1.1e-159 567.0 401 72.6
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 5.4e-159 564.7 402 74.4
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 1.6e-158 563.1 401 74.3
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 2.7e-158 562.4 425 70.1
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 2.7e-158 562.4 402 72.9
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 3.5e-158 562.0 400 73.5
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 3.5e-158 562.0 401 71.8
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 7.7e-158 560.8 401 71.6
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 1.0e-157 560.5 403 73.2
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 2.3e-157 559.3 400 72.8
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 2.9e-157 558.9 401 71.6
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 2.9e-157 558.9 402 72.6
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 1.1e-156 557.0 401 71.1
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 3.3e-156 555.4 402 73.1
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 9.5e-156 553.9 401 71.8
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 3.6e-155 552.0 403 72.2
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 6.1e-155 551.2 397 72.5
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 1.0e-154 550.4 400 72.2
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.4e-154 550.1 400 73.5
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 1.8e-154 549.7 400 72.0
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 4.0e-154 548.5 400 72.2
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 8.9e-154 547.4 397 72.0
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 8.9e-154 547.4 427 67.9
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.2e-153 547.0 402 72.6
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 2.6e-153 545.8 401 70.1
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 3.4e-153 545.4 400 71.5
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 4.4e-153 545.0 397 72.0
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 4.4e-153 545.0 396 71.5
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 7.5e-153 544.3 403 70.5
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 1.3e-152 543.5 398 71.6
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 1.3e-152 543.5 400 72.0
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 1.3e-152 543.5 396 71.0
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 2.2e-152 542.7 396 72.2
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 6.4e-152 541.2 400 69.8
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 8.3e-152 540.8 400 70.5
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 8.3e-152 540.8 403 70.2
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 1.1e-151 540.4 403 70.7
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 7.0e-151 537.7 398 71.1
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 9.2e-151 537.3 398 70.4
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 9.2e-151 537.3 398 70.4
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 9.2e-151 537.3 398 70.9
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.0e-150 536.2 397 71.8
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.7e-150 535.8 397 71.8
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 2.7e-150 535.8 416 68.8
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 1.7e-149 533.1 403 69.7
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 3.0e-149 532.3 417 68.8
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 1.1e-148 530.4 397 72.5
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 3.3e-148 528.9 405 69.4
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 5.6e-148 528.1 402 69.4
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 8.0e-147 524.2 418 67.9
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 1.4e-146 523.5 402 69.9
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 2.0e-145 519.6 399 68.4
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 3.4e-145 518.8 411 68.1
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 4.4e-145 518.5 403 68.2
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 1.3e-144 516.9 403 67.7
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 3.7e-144 515.4 400 68.0
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 6.4e-144 514.6 401 67.3
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 6.4e-144 514.6 399 68.4
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 1.9e-143 513.1 397 67.0
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 1.9e-143 513.1 403 67.5
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 5.4e-143 511.5 411 68.6
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 6.0e-142 508.1 402 67.9
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 2.3e-141 506.1 399 68.7
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.5e-140 502.7 396 68.2
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 9.5e-140 500.7 404 66.6
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 8.1e-139 497.7 398 65.3
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.5e-137 493.4 401 65.6
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 1.5e-137 493.4 396 66.4
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 3.4e-137 492.3 401 65.6
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 3.4e-137 492.3 398 64.3
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 3.4e-137 492.3 399 64.7
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 2.2e-136 489.6 400 64.5
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 3.7e-136 488.8 404 65.3
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 8.3e-136 487.6 401 65.8
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 8.3e-136 487.6 382 67.8
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.4e-135 486.9 399 63.4
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 5.4e-135 485.0 398 65.3
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 5.4e-135 485.0 401 64.6
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 7.1e-135 484.6 364 71.2
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 1.2e-134 483.8 348 71.6
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.3e-133 480.3 403 65.0
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 7.3e-132 474.6 397 64.7
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 1.2e-131 473.8 401 63.3
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 3.6e-131 472.2 398 65.1
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 4.7e-131 471.9 397 60.5
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 8.1e-131 471.1 401 63.1
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 2.3e-130 469.5 401 63.1
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 2.3e-130 469.5 400 63.0
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 6.8e-130 468.0 400 63.2
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 6.4e-128 461.5 399 63.7
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 6.4e-128 461.5 399 63.7
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 1.4e-127 460.3 400 63.2
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 1.4e-127 460.3 400 63.2
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 1.9e-127 459.9 399 61.9
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 3.2e-127 459.1 402 62.7
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 2.1e-126 456.4 398 63.1
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.9e-124 449.9 402 60.4
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 3.5e-118 429.1 301 74.1
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 3.0e-117 426.0 401 60.1
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 4.4e-113 412.1 396 58.6
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 1.2e-102 377.5 346 61.3
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 3.9e-101 372.5 407 53.1
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 5.6e-100 368.6 326 61.3
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 4.0e-98 362.5 399 52.1
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 5.5e-95 352.1 413 49.9
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 2.1e-91 340.1 431 47.8
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 2.4e-90 336.7 411 49.1
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 3.9e-77 292.7 201 73.1
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 2.2e-75 287.0 246 60.2
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 3.7e-75 286.2 438 43.4
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 1.7e-72 277.3 392 44.6
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 6.5e-72 275.4 325 50.8
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 3.3e-68 263.1 422 39.1
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.5e-63 247.7 171 75.4
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 8.8e-53 211.8 342 43.0
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 7.0e-50 202.2 293 43.0
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 1.2e-41 174.9 193 56.5
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 5.0e-40 169.5 148 60.1
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 4.3e-31 139.8 101 69.3
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.4e-26 124.8 121 56.2
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 5.0e-24 116.3 133 49.6
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 7.5e-20 102.4 64 73.4
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 1.1e-18 98.6 88 63.6
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 9.2e-18 95.5 86 58.1
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 2.1e-17 94.4 192 34.9


User provided reference genes

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