Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25108 Davidia involucrata HOM05D001448 ORTHO05D037920 4.7e-99 364.8 217 100.0
Dinv22438 Davidia involucrata HOM05D001448 ORTHO05D005781 2.5e-36 156.4 87 96.6
GSVIVG01028296001 Vitis vinifera HOM05D001448 ORTHO05D005781 3.0e-21 106.3 92 64.1
Rhsim01G0266300 Rhododendron simsii HOM05D001448 ORTHO05D005781 5.7e-20 102.1 88 68.2
CSS0017569 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 4.8e-19 99.0 87 65.5
CSS0028913 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 4.8e-19 99.0 87 65.5
Duzib138G0307 Durio zibethinus HOM05D001448 ORTHO05D005781 6.3e-19 98.6 92 62.0
Gohir.A11G129066 Gossypium hirsutum HOM05D001448 ORTHO05D005781 1.1e-18 97.8 92 60.9
Gorai.007G144300 Gossypium raimondii HOM05D001448 ORTHO05D005781 1.1e-18 97.8 92 60.9
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.1e-18 97.8 91 61.5
Gohir.D11G134900 Gossypium hirsutum HOM05D001448 ORTHO05D005781 1.4e-18 97.4 92 60.9
vmacro14854 Vaccinium macrocarpon HOM05D001448 ORTHO05D005781 1.8e-18 97.1 88 63.6
Ciclev10018683m.g Citrus clementina HOM05D001448 ORTHO05D005781 2.4e-18 96.7 69 78.3
Peaxi162Scf00134g00123 Petunia axillaris HOM05D001448 ORTHO05D005781 3.1e-18 96.3 112 50.9
Actinidia09565 Actinidia chinensis HOM05D001448 ORTHO05D005781 4.1e-18 95.9 91 63.7
Eucgr.K03285 Eucalyptus grandis HOM05D001448 ORTHO05D005781 4.1e-18 95.9 89 60.7
Lj2C1155G3 Lonicera japonica HOM05D001448 ORTHO05D005781 4.1e-18 95.9 89 66.3
Nitab4.5_0004192g0040 Nicotiana tabacum HOM05D001448 ORTHO05D005781 5.3e-18 95.5 92 58.7
Dinv03004 Davidia involucrata HOM05D001448 ORTHO05D005781 1.2e-17 94.4 68 70.6
PGR044G0051 Punica granatum HOM05D001448 ORTHO05D005781 1.5e-17 94.0 91 58.2
Nitab4.5_0000086g0180 Nicotiana tabacum HOM05D001448 ORTHO05D005781 2.0e-17 93.6 92 58.7
CAN.G461.11 Capsicum annuum HOM05D001448 ORTHO05D005781 2.6e-17 93.2 92 57.6
Thecc.01G262000 Theobroma cacao HOM05D001448 ORTHO05D005781 2.6e-17 93.2 91 61.5
Cpa.g.sc50.45 Carica papaya HOM05D001448 ORTHO05D005781 4.5e-17 92.4 91 58.2
Duzib211G0273 Durio zibethinus HOM05D001448 ORTHO05D005781 7.7e-17 91.7 92 58.7
COL.COLO4_05599 Corchorus olitorius HOM05D001448 ORTHO05D005781 2.2e-16 90.1 93 57.0
ClCG07G000910 Citrullus lanatus HOM05D001448 ORTHO05D005781 2.9e-16 89.7 89 57.3
TWI18G1036 Tripterygium wilfordii HOM05D001448 ORTHO05D005781 2.9e-16 89.7 85 60.0
Prupe.8G227600 Prunus persica HOM05D001448 ORTHO05D005781 5.0e-16 89.0 87 57.5
Sc24g0003080 Simmondsia chinensis HOM05D001448 ORTHO05D005781 5.0e-16 89.0 92 57.6
RcHm_v2.0_Chr6g0288861 Rosa chinensis HOM05D001448 ORTHO05D005781 6.5e-16 88.6 87 55.2
Medtr7g096520 Medicago truncatula HOM05D001448 ORTHO05D005781 8.5e-16 88.2 81 59.3
Nn1g02698 Nelumbo nucifera HOM05D001448 ORTHO05D005781 8.5e-16 88.2 87 58.6
Haze_24590 Corylus avellana HOM05D001448 ORTHO05D005781 1.1e-15 87.8 87 58.6
MELO3C024039.2 Cucumis melo HOM05D001448 ORTHO05D005781 1.1e-15 87.8 89 58.4
CsaV3_3G022600 Cucumis sativus L. HOM05D001448 ORTHO05D005781 1.1e-15 87.8 89 55.1
HanXRQChr10g0281131 Helianthus annuus HOM05D001448 ORTHO05D005781 1.1e-15 87.8 87 59.8
Aqoxy5G00274 Aquilegia oxysepala HOM05D001448 ORTHO05D005781 1.4e-15 87.4 92 58.7
Cfa002395 Carpinus fangiana HOM05D001448 ORTHO05D005781 1.4e-15 87.4 87 58.6
Manes.05G087700 Manihot esculenta HOM05D001448 ORTHO05D005781 1.4e-15 87.4 87 57.5
Ca_08659_v3 Cicer arietinum L. HOM05D001448 ORTHO05D005781 1.9e-15 87.0 88 58.0
Haze_24594 Corylus avellana HOM05D001448 ORTHO05D005781 1.9e-15 87.0 87 58.6
Lj1g0021166 Lotus japonicus HOM05D001448 ORTHO05D005781 1.9e-15 87.0 87 59.8
Migut.D00407 Erythranthe guttata HOM05D001448 ORTHO05D005781 2.5e-15 86.7 91 59.3
Sed0017037 Sechium edule HOM05D001448 ORTHO05D005781 2.5e-15 86.7 89 56.2
Sopen03g036870 Solanum pennellii HOM05D001448 ORTHO05D005781 3.2e-15 86.3 92 53.3
Sc24g0002470 Simmondsia chinensis HOM05D001448 ORTHO05D005781 4.2e-15 85.9 92 55.4
Atru.chr5.1640 Acer truncatum HOM05D001448 ORTHO05D005781 7.2e-15 85.1 91 59.3
arahy.Tifrunner.gnm1.ann1.84CV5L Arachis hypogaea HOM05D001448 ORTHO05D005781 7.2e-15 85.1 80 60.0
arahy.Tifrunner.gnm1.ann1.BU3W1C Arachis hypogaea HOM05D001448 ORTHO05D005781 7.2e-15 85.1 80 60.0
CANSAT01G0590 Cannabis sativa HOM05D001448 ORTHO05D005781 9.4e-15 84.7 80 58.8
QL09p037774 Quercus lobata HOM05D001448 ORTHO05D005781 1.6e-14 84.0 92 54.3
DCAR_018467 Daucus carota HOM05D001448 ORTHO05D005781 2.1e-14 83.6 90 53.3
FAN24G2205 Fragaria x ananassa HOM05D001448 ORTHO05D005781 2.1e-14 83.6 52 76.9
PSO017G5465 Papaver somniferum HOM05D001448 ORTHO05D005781 2.1e-14 83.6 92 56.5
PSO063G1607 Papaver somniferum HOM05D001448 ORTHO05D005781 2.1e-14 83.6 92 56.5
MD10G1187800 Malus domestica HOM05D001448 ORTHO05D005781 2.7e-14 83.2 87 54.0
VMungo1383G0732 Vigna mungo HOM05D001448 ORTHO05D005781 3.6e-14 82.8 87 55.2
Potri.002G041300 Populus trichocarpa HOM05D001448 ORTHO05D005781 4.6e-14 82.4 87 55.2
AUR62011902 Chenopodium quinoa HOM05D001448 ORTHO05D005781 6.1e-14 82.0 87 54.0
Psat3g059080 Pisum sativum HOM05D001448 ORTHO05D005781 6.1e-14 82.0 81 59.3
MD05G1201000 Malus domestica HOM05D001448 ORTHO05D005781 1.0e-13 81.3 87 52.9
Sabra02G0032900 Salix brachista HOM05D001448 ORTHO05D005781 1.0e-13 81.3 88 56.8
TPR.G16288 Trifolium pratense HOM05D001448 ORTHO05D005781 1.0e-13 81.3 87 54.0
Lsat_1_v5_gn_9_8981 Lactuca sativa HOM05D001448 ORTHO05D005781 1.4e-13 80.9 88 56.8
Phvul.001G159200 Phaseolus vulgaris HOM05D001448 ORTHO05D005781 1.4e-13 80.9 87 55.2
Lalb_Chr01g0019731 Lupinus albus HOM05D001448 ORTHO05D005781 1.8e-13 80.5 91 52.7
FAN15G0786 Fragaria x ananassa HOM05D001448 ORTHO05D005781 2.3e-13 80.1 46 82.6
FAN20G0519 Fragaria x ananassa HOM05D001448 ORTHO05D005781 2.3e-13 80.1 46 82.6
FAN27G1373 Fragaria x ananassa HOM05D001448 ORTHO05D005781 2.3e-13 80.1 46 82.6
Glyma.03G161300 Glycine max HOM05D001448 ORTHO05D005781 2.3e-13 80.1 81 53.1
Cc01_g18530 Coffea canephora HOM05D001448 ORTHO05D005781 3.9e-13 79.3 92 54.3
Glyma.19G162800 Glycine max HOM05D001448 ORTHO05D005781 3.9e-13 79.3 81 54.3
Hund09588 Selenicereus undatus HOM05D001448 ORTHO05D005781 3.9e-13 79.3 87 52.9
AUR62024743 Chenopodium quinoa HOM05D001448 ORTHO05D005781 5.1e-13 79.0 87 51.7
Lj2g0018286 Lotus japonicus HOM05D001448 ORTHO05D005781 6.7e-13 78.6 90 54.4
Ah.02g111820 Amaranthus hybridus HOM05D001448 ORTHO05D005781 8.8e-13 78.2 89 52.8
ATR0680G113 Amborella trichopoda HOM05D001448 ORTHO05D005781 8.8e-13 78.2 102 48.0
ECA247G2778 Erigeron canadensis HOM05D001448 ORTHO05D005781 8.8e-13 78.2 87 55.2
CDE09G1103 Ceratophyllum demersum HOM05D001448 ORTHO05D005781 5.7e-12 75.5 86 47.7
FvH4_2g21980 Fragaria vesca HOM05D001448 ORTHO05D005781 5.7e-12 75.5 45 77.8
Atru.chr4.1276 Acer truncatum HOM05D001448 ORTHO05D037920 9.7e-12 74.7 48 77.1
ClCG07G000900 Citrullus lanatus HOM05D001448 ORTHO05D005781 2.2e-11 73.6 88 53.4
EL10Ac5g10426 Beta vulgaris HOM05D001448 ORTHO05D005781 2.8e-11 73.2 87 51.7
SalBow4G1626 Salvia bowleyana HOM05D001448 ORTHO05D005781 8.2e-11 71.6 87 55.2
SalBow4G1745 Salvia bowleyana HOM05D001448 ORTHO05D005781 8.2e-11 71.6 87 55.2
BcaB02g10384 Brassica carinata HOM05D001448 ORTHO05D005781 2.4e-10 70.1 88 48.9
Os07g0413700 Oryza sativa ssp. japonica HOM05D001448 ORTHO05D005781 3.1e-10 69.7 78 50.0
Aa31LG5G5640 Aethionema arabicum HOM05D001448 ORTHO05D005781 4.1e-10 69.3 87 48.3
Sp4g13800 Schrenkiella parvula HOM05D001448 ORTHO05D005781 4.1e-10 69.3 89 47.2
BcaC02g11226 Brassica carinata HOM05D001448 ORTHO05D005781 5.3e-10 68.9 88 50.0
A05p14280 Brassica napus HOM05D001448 ORTHO05D005781 5.3e-10 68.9 88 50.0
C04p19030 Brassica napus HOM05D001448 ORTHO05D005781 5.3e-10 68.9 88 50.0
BolC4t23436H Brassica oleracea HOM05D001448 ORTHO05D005781 5.3e-10 68.9 88 50.0
BraA05t20358Z Brassica rapa HOM05D001448 ORTHO05D005781 5.3e-10 68.9 88 50.0
THA.LOC104800882 Tarenaya hassleriana HOM05D001448 ORTHO05D005781 5.3e-10 68.9 86 52.3
SGA_v2.0_scaffold138G35260 Striga asiatica HOM05D001448 ORTHO05D005781 6.9e-10 68.6 41 80.5
HPP92_025971 Vanilla planifolia HOM05D001448 ORTHO05D005781 9.1e-10 68.2 66 53.0
Thhalv10016190m.g Eutrema salsugineum HOM05D001448 ORTHO05D005781 2.0e-09 67.0 83 48.2
AT2G31320 Arabidopsis thaliana HOM05D001448 ORTHO05D005781 3.4e-09 66.2 92 44.6
Carub.0004s1263 Capsella rubella HOM05D001448 ORTHO05D005781 5.9e-09 65.5 99 43.4
Pp3c8_17220 Physcomitrium patens HOM05D001448 ORTHO05D005781 5.9e-09 65.5 50 60.0
CARHR124940 Cardamine hirsuta HOM05D001448 ORTHO05D005781 1.0e-08 64.7 87 43.7
MBI18_g10474_MAGBIO Magnolia biondii HOM05D001448 ORTHO05D005781 1.0e-08 64.7 87 43.7
unitig_8.g3886 Utricularia gibba HOM05D001448 ORTHO05D005781 1.3e-08 64.3 88 46.6
AL4G26550 Arabidopsis lyrata HOM05D001448 ORTHO05D005781 1.7e-08 63.9 92 43.5
PSO782G0756 Papaver somniferum HOM05D001448 ORTHO05D005781 1.7e-08 63.9 89 43.8
CBR_g1120 Chara braunii HOM05D001448 ORTHO05D005781 3.8e-08 62.8 90 40.0
TAR633G1514 Trochodendron aralioides HOM05D001481 ORTHO05D001865 1.1e-07 61.2 76 51.3
Mapoly0154s0015 Marchantia polymorpha HOM05D001448 ORTHO05D005781 2.5e-07 60.1 91 39.6
Zm00001eb094840 Zea mays HOM05D001448 ORTHO05D005781 3.2e-07 59.7 92 41.3
Dinv16562 Davidia involucrata HOM05D001448 ORTHO05D179170 9.4e-07 58.2 63 58.7
SEGI_22534 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 1.2e-06 57.8 92 40.2


User provided reference genes

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