Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 3.1e-221 771.5 398 100.0
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 8.0e-105 384.8 274 75.9
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 1.3e-102 377.5 279 74.2
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 6.2e-97 358.6 275 70.9
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 9.2e-93 344.7 229 77.7
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 3.5e-92 342.8 263 70.0
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 2.3e-91 340.1 271 68.6
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 3.6e-89 332.8 255 70.2
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.1e-88 331.3 268 68.3
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.0e-87 327.0 267 67.4
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.7e-86 323.9 230 72.6
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 1.7e-86 323.9 267 67.0
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 2.2e-86 323.6 259 67.2
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 2.9e-86 323.2 284 63.7
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.4e-85 320.9 267 66.3
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 3.2e-85 319.7 243 69.5
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 7.8e-84 315.1 246 67.5
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.7e-83 313.9 250 67.6
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 1.9e-82 310.5 276 63.0
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.5e-82 310.1 276 63.0
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 1.2e-81 307.8 246 66.3
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.6e-81 307.4 266 64.7
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 2.8e-81 306.6 256 64.8
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 6.8e-80 302.0 276 63.4
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 8.9e-80 301.6 276 64.1
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 3.8e-78 296.2 251 65.3
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 1.4e-77 294.3 269 60.2
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.4e-77 293.5 243 65.8
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.6e-76 290.8 255 63.1
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.3e-75 287.7 254 62.6
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.1e-74 284.6 278 59.0
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 2.5e-74 283.5 274 60.6
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 3.3e-74 283.1 251 62.9
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.3e-73 281.2 269 58.4
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.8e-73 280.0 274 58.0
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.8e-72 277.3 267 60.7
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 9.0e-72 275.0 274 60.2
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.2e-71 274.6 246 61.8
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 1.5e-71 274.2 232 63.8
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 1.5e-71 274.2 248 60.9
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 2.6e-71 273.5 281 56.6
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 3.4e-71 273.1 246 61.4
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 7.6e-71 271.9 255 60.0
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 7.6e-71 271.9 255 60.4
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 9.9e-71 271.6 211 70.1
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.2e-70 270.4 267 58.4
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.9e-70 270.0 255 60.4
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 3.8e-70 269.6 285 58.6
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 8.4e-70 268.5 267 58.4
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.1e-69 268.1 234 62.4
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.4e-69 267.7 260 58.5
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 2.4e-69 266.9 270 57.8
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 1.6e-68 264.2 243 61.3
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 2.1e-68 263.8 278 56.8
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 6.0e-68 262.3 267 56.2
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.0e-67 261.5 225 62.2
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 2.3e-67 260.4 237 61.6
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 5.1e-67 259.2 242 59.5
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 6.6e-67 258.8 210 66.2
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.5e-66 256.9 240 58.8
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.3e-66 256.5 256 57.0
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 9.6e-66 255.0 243 59.7
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 3.6e-65 253.1 240 58.3
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.6e-65 253.1 268 56.3
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 8.1e-65 251.9 271 55.0
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.8e-64 250.8 221 60.6
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.8e-64 250.8 218 65.1
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 3.1e-64 250.0 261 56.3
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 5.3e-64 249.2 254 56.7
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 5.3e-64 249.2 261 55.9
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 9.0e-64 248.4 246 58.1
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 1.2e-63 248.1 270 55.2
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 1.5e-63 247.7 256 55.5
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 4.5e-63 246.1 258 56.6
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 5.8e-63 245.7 260 56.9
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 7.6e-63 245.4 253 55.7
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.2e-62 243.8 272 53.7
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 2.2e-62 243.8 272 53.7
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 8.4e-62 241.9 238 58.0
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.1e-61 241.5 268 52.6
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.1e-58 231.5 209 61.7
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.5e-58 231.1 273 51.3
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 2.1e-57 227.3 247 55.1
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 4.8e-57 226.1 247 55.9
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 2.4e-56 223.8 193 62.7
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 9.0e-56 221.9 270 51.5
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 1.2e-52 211.5 248 51.2
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 2.1e-52 210.7 267 49.4
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 7.4e-50 202.2 236 53.8
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 6.9e-48 195.7 230 51.7
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 5.8e-47 192.6 351 40.7
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 4.2e-45 186.4 223 48.4
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.6e-44 184.5 211 51.7
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 7.9e-44 182.2 268 45.9
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 7.9e-44 182.2 268 45.9
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 1.0e-43 181.8 240 47.1
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 1.8e-43 181.0 246 48.4
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 8.7e-43 178.7 242 47.5
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 8.7e-43 178.7 250 46.0
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 8.7e-43 178.7 250 46.0
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.5e-42 177.9 247 47.0
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 1.6e-41 174.5 239 44.8
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 1.6e-41 174.5 290 40.0
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 1.4e-40 171.4 248 44.0
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.8e-40 171.0 235 47.2
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.8e-40 171.0 250 44.4
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 3.1e-40 170.2 208 48.6
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 5.3e-40 169.5 107 78.5
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 1.5e-39 167.9 208 48.1
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 8.5e-38 162.2 183 50.8
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 1.2e-36 158.3 156 53.8
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 3.0e-35 153.7 223 47.5
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.5e-34 151.4 103 78.6
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 6.5e-30 136.0 94 70.2
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 7.2e-29 132.5 177 47.5
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-25 121.7 153 45.8
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 3.7e-25 120.2 84 75.0
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.1e-24 117.1 163 47.9
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 5.3e-24 116.3 182 42.3
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 7.0e-24 115.9 112 53.6
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 9.1e-24 115.5 72 81.9
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 2.9e-22 110.5 118 54.2
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 5.5e-21 106.3 206 33.5
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 7.2e-21 105.9 202 37.6
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 3.6e-20 103.6 207 36.2
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 5.2e-19 99.8 81 63.0
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.1e-16 92.0 63 74.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 4.5e-15 86.7 63 66.7
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 5.9e-15 86.3 56 80.4
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-11 75.5 164 30.5
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 1.7e-09 68.2 66 51.5
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 8.3e-09 65.9 128 38.3


User provided reference genes

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