Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25091 Davidia involucrata HOM05D003229 ORTHO05D003835 1.9e-273 945.7 558 100.0
Actinidia12901 Actinidia chinensis HOM05D003229 ORTHO05D003835 1.1e-23 115.9 254 32.7
AUR62001585 Chenopodium quinoa HOM05D003229 ORTHO05D003835 4.4e-20 104.0 202 31.7
Peaxi162Scf00355g00005 Petunia axillaris HOM05D003229 ORTHO05D003835 7.5e-20 103.2 185 33.5
AUR62020197 Chenopodium quinoa HOM05D003229 ORTHO05D003835 9.8e-20 102.8 243 28.4
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 2.4e-18 98.2 205 30.7
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 3.1e-18 97.8 145 37.2
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 3.1e-18 97.8 199 34.2
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 2.0e-17 95.1 148 35.1
Dinv32144 Davidia involucrata HOM05D003229 ORTHO05D003835 2.0e-17 95.1 135 37.8
FAN20G2341 Fragaria x ananassa HOM05D003229 ORTHO05D003835 5.9e-17 93.6 182 32.4
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 7.7e-17 93.2 353 26.6
DCAR_012260 Daucus carota HOM05D003229 ORTHO05D003835 1.0e-16 92.8 130 40.8
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 1.3e-16 92.4 192 31.2
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 1.7e-16 92.0 369 25.5
Hma1.2p1_0127F.1_g059620 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 1.7e-16 92.0 173 36.4
FAN27G0679 Fragaria x ananassa HOM05D003229 ORTHO05D003835 2.2e-16 91.7 182 31.9
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 2.9e-16 91.3 194 38.7
FAN15G3758 Fragaria x ananassa HOM05D003229 ORTHO05D003835 2.9e-16 91.3 165 35.2
FvH4_2g05241 Fragaria vesca HOM05D003229 ORTHO05D003835 3.8e-16 90.9 182 31.3
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 3.8e-16 90.9 133 33.8
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 6.5e-16 90.1 142 37.3
FAN24G0320 Fragaria x ananassa HOM05D003229 ORTHO05D003835 8.5e-16 89.7 182 30.8
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 8.5e-16 89.7 132 34.1
Glyma.20G055200 Glycine max HOM05D003229 ORTHO05D003835 1.5e-15 89.0 133 40.6
HanXRQChr05g0137001 Helianthus annuus HOM05D003229 ORTHO05D003835 1.5e-15 89.0 130 36.2
Lj6g0007817 Lotus japonicus HOM05D003229 ORTHO05D003835 1.5e-15 89.0 135 45.9
RcHm_v2.0_Chr6g0255381 Rosa chinensis HOM05D003229 ORTHO05D003835 1.5e-15 89.0 88 45.5
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 2.5e-15 88.2 189 30.2
HanXRQChr03g0089231 Helianthus annuus HOM05D003229 ORTHO05D003835 2.5e-15 88.2 122 38.5
PGSC0003DMG400002995 Solanum tuberosum HOM05D003229 ORTHO05D003835 2.5e-15 88.2 113 37.2
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 3.2e-15 87.8 107 41.1
Sopen11g029360 Solanum pennellii HOM05D003229 ORTHO05D003835 3.2e-15 87.8 111 36.9
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 4.2e-15 87.4 375 25.6
Solyc11g071690.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 4.2e-15 87.4 151 31.8
EL10Ac7g16254 Beta vulgaris HOM05D003229 ORTHO05D003835 7.2e-15 86.7 137 35.8
Phvul.006G006900 Phaseolus vulgaris HOM05D003229 ORTHO05D003835 7.2e-15 86.7 224 32.1
Glyma.13G028000 Glycine max HOM05D003229 ORTHO05D003835 9.5e-15 86.3 136 38.2
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 1.2e-14 85.9 136 34.6
ECA238G1805 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.2e-14 85.9 154 31.8
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 1.2e-14 85.9 127 36.2
MD03G1161300 Malus domestica HOM05D003229 ORTHO05D003835 1.2e-14 85.9 96 43.8
Rhsim01G0198100 Rhododendron simsii HOM05D003229 ORTHO05D003835 1.6e-14 85.5 140 36.4
CSS0010675 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 2.1e-14 85.1 76 52.6
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 2.1e-14 85.1 77 50.6
Rhsim13G0199400 Rhododendron simsii HOM05D003229 ORTHO05D003835 2.1e-14 85.1 68 54.4
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 2.1e-14 85.1 252 28.2
Lalb_Chr17g0347381 Lupinus albus HOM05D003229 ORTHO05D003835 2.7e-14 84.7 139 36.7
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 2.7e-14 84.7 201 31.3
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 4.7e-14 84.0 162 32.1
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 6.1e-14 83.6 207 32.4
Thecc.05G181700 Theobroma cacao HOM05D003229 ORTHO05D003835 6.1e-14 83.6 376 25.8
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 8.0e-14 83.2 107 40.2
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 8.0e-14 83.2 107 41.1
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 8.0e-14 83.2 162 32.1
Psat2g023800 Pisum sativum HOM05D003229 ORTHO05D003835 1.8e-13 82.0 117 49.6
vmacro14302 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 1.8e-13 82.0 92 46.7
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 2.3e-13 81.6 146 44.5
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 3.0e-13 81.3 89 43.8
Duzib128G0535 Durio zibethinus HOM05D003229 ORTHO05D003835 3.0e-13 81.3 131 39.7
Lsat_1_v5_gn_0_39260 Lactuca sativa HOM05D003229 ORTHO05D003835 3.0e-13 81.3 153 27.5
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 3.0e-13 81.3 136 33.8
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 4.0e-13 80.9 208 32.2
MELO3C017380.2 Cucumis melo HOM05D003229 ORTHO05D003835 4.0e-13 80.9 233 32.2
CSS0045009 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 5.2e-13 80.5 62 53.2
Ah.08g222380 Amaranthus hybridus HOM05D003229 ORTHO05D003835 6.8e-13 80.1 140 32.9
CANSAT35G0213 Cannabis sativa HOM05D003229 ORTHO05D003835 6.8e-13 80.1 96 41.7
Eucgr.J00598 Eucalyptus grandis HOM05D003229 ORTHO05D003835 8.8e-13 79.7 48 62.5
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 1.2e-12 79.3 147 35.4
Cpa.g.sc103.35 Carica papaya HOM05D003229 ORTHO05D003835 1.5e-12 79.0 214 30.8
QL02p079790 Quercus lobata HOM05D003229 ORTHO05D003835 1.5e-12 79.0 123 40.7
TPR.G15596 Trifolium pratense HOM05D003229 ORTHO05D003835 2.6e-12 78.2 133 42.9
PSO339G4047 Papaver somniferum HOM05D003229 ORTHO05D003835 3.4e-12 77.8 157 31.2
PSO384G4356 Papaver somniferum HOM05D003229 ORTHO05D003835 3.4e-12 77.8 157 31.2
PGR119G2320 Punica granatum HOM05D003229 ORTHO05D003835 3.4e-12 77.8 108 38.0
Thecc.05G214900 Theobroma cacao HOM05D003229 ORTHO05D003835 3.4e-12 77.8 123 36.6
VMungo0540G0117 Vigna mungo HOM05D003229 ORTHO05D003835 3.4e-12 77.8 207 31.4
DCAR_022907 Daucus carota HOM05D003633 ORTHO05D004245 4.4e-12 77.4 118 37.3
Gohir.D13G092701 Gossypium hirsutum HOM05D003229 ORTHO05D003835 4.4e-12 77.4 161 34.2
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 4.4e-12 77.4 161 34.2
Solyc06g073810.4 Solanum lycopersicum HOM05D003229 ORTHO05D003835 5.7e-12 77.0 91 39.6
Sopen06g030210 Solanum pennellii HOM05D003229 ORTHO05D003835 5.7e-12 77.0 91 39.6
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 7.5e-12 76.6 241 28.2
PGSC0003DMG400005910 Solanum tuberosum HOM05D003229 ORTHO05D003835 7.5e-12 76.6 91 39.6
ECA240G3284 Erigeron canadensis HOM05D003229 ORTHO05D003835 9.8e-12 76.3 97 40.2
Lalb_Chr13g0294131 Lupinus albus HOM05D003229 ORTHO05D003835 1.7e-11 75.5 64 53.1
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.7e-11 75.5 133 32.3
ClCG06G014150 Citrullus lanatus HOM05D003229 ORTHO05D003835 2.2e-11 75.1 168 38.7
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 2.2e-11 75.1 251 32.3
THA.LOC104810972 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 2.8e-11 74.7 222 29.3
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 3.7e-11 74.3 182 36.3
TWI74G0877 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 3.7e-11 74.3 222 29.3
Manes.04G063962 Manihot esculenta HOM05D003229 ORTHO05D003835 6.3e-11 73.6 180 31.7
AL5G21520 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 1.8e-10 72.0 130 33.8
CDE05G3619 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 1.8e-10 72.0 134 41.0
Atru.chr8.1245 Acer truncatum HOM05D003229 ORTHO05D003835 2.4e-10 71.6 211 26.5
Carub.0005s0931 Capsella rubella HOM05D003229 ORTHO05D003835 2.4e-10 71.6 129 34.9
Aqoxy1G00567 Aquilegia oxysepala HOM05D003229 ORTHO05D003835 3.1e-10 71.2 122 50.0
Manes.11G104500 Manihot esculenta HOM05D003229 ORTHO05D003835 3.1e-10 71.2 82 42.7
Sed0019248 Sechium edule HOM05D003229 ORTHO05D003835 3.1e-10 71.2 157 33.1
AT3G43590 Arabidopsis thaliana HOM05D003229 ORTHO05D003835 4.1e-10 70.9 130 34.6
Potri.004G193500 Populus trichocarpa HOM05D003229 ORTHO05D003835 4.1e-10 70.9 70 48.6
Oeu058180.2 Olea europaea HOM05D003229 ORTHO05D003835 7.0e-10 70.1 89 42.7
Sabra04G0131800 Salix brachista HOM05D003229 ORTHO05D003835 9.2e-10 69.7 64 50.0
BraA06t25329Z Brassica rapa HOM05D003229 ORTHO05D003835 1.2e-09 69.3 165 31.5
CDE01G0204 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 2.0e-09 68.6 86 52.3
Lsat_1_v5_gn_3_111681 Lactuca sativa HOM05D003229 ORTHO05D003835 2.0e-09 68.6 74 43.2
HPP92_026334 Vanilla planifolia HOM05D003229 ORTHO05D003835 2.0e-09 68.6 59 49.2
ATR0697G070 Amborella trichopoda HOM05D003229 ORTHO05D003835 3.5e-09 67.8 96 47.9
SEGI_34455 Sequoiadendron giganteum HOM05D003229 ORTHO05D003835 3.5e-09 67.8 130 37.7
A06p22470 Brassica napus HOM05D003229 ORTHO05D003835 5.9e-09 67.0 165 31.5
A06p22530 Brassica napus HOM05D003229 ORTHO05D003835 5.9e-09 67.0 165 31.5
C03p68590 Brassica napus HOM05D003229 ORTHO05D003835 5.9e-09 67.0 164 31.7
BolC3t19117H Brassica oleracea HOM05D003229 ORTHO05D003835 5.9e-09 67.0 164 31.7
Carub.0005s0918 Capsella rubella HOM05D003229 ORTHO05D003835 5.9e-09 67.0 104 34.6
Ciclev10011928m.g Citrus clementina HOM05D003229 ORTHO05D003835 5.9e-09 67.0 154 31.2
MBI11_g25050_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 5.9e-09 67.0 44 61.4
Sabra04G0131600 Salix brachista HOM05D003229 ORTHO05D003835 5.9e-09 67.0 132 34.8
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 5.9e-09 67.0 401 25.7
CARHR287360 Cardamine hirsuta HOM05D003229 ORTHO05D003835 7.7e-09 66.6 166 28.3
Potri.009G155500 Populus trichocarpa HOM05D003229 ORTHO05D003835 1.0e-08 66.2 63 49.2
Sed0028007 Sechium edule HOM05D003229 ORTHO05D003835 1.7e-08 65.5 180 29.4
AL5G21420 Arabidopsis lyrata HOM05D003229 ORTHO05D003835 2.3e-08 65.1 142 28.9
Aa31LG4G13390 Aethionema arabicum HOM05D003229 ORTHO05D003835 2.9e-08 64.7 127 33.9
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 2.9e-08 64.7 230 26.5
Sabra09G0121900 Salix brachista HOM05D003229 ORTHO05D003835 2.9e-08 64.7 63 47.6
CsaV3_1G004530 Cucumis sativus L. HOM05D003229 ORTHO05D003835 5.0e-08 63.9 166 30.1
LjContig00564g0024504 Lotus japonicus HOM05D003229 ORTHO05D003835 8.6e-08 63.2 66 43.9
CANSAT54G2724 Cannabis sativa HOM05D003229 ORTHO05D003835 1.1e-07 62.8 140 37.9
Sopen01g025320 Solanum pennellii HOM05D000006 ORTHO05D000001 1.1e-07 62.8 137 31.4
Zm00001eb200300 Zea mays HOM05D003229 ORTHO05D003835 1.1e-07 62.8 62 48.4
Thhalv10020505m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.5e-07 62.4 158 28.5
Sp5g17570 Schrenkiella parvula HOM05D003229 ORTHO05D003835 3.3e-07 61.2 126 30.2
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 4.3e-07 60.8 376 23.4
Pp3c2_2680 Physcomitrium patens HOM05D003229 ORTHO05D003835 7.3e-07 60.1 59 45.8
Zm00001eb114310 Zea mays HOM05D003229 ORTHO05D003835 7.3e-07 60.1 62 46.8
CSS0028132 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 9.5e-07 59.7 104 35.6
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 1.6e-06 58.9 54 50.0
CBR_g8477 Chara braunii HOM05D003229 ORTHO05D000407 3.6e-06 57.8 147 28.6
AagrBONN_evm.TU.Sc2ySwM_368.3251 Anthoceros agrestis HOM05D003229 ORTHO05D003835 4.7e-06 57.4 130 32.3
PGSC0003DMG401021491 Solanum tuberosum HOM05D024157 ORTHO05D025896 6.1e-06 57.0 144 31.2
THA.LOC104799740 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 6.1e-06 57.0 222 27.5
Thhalv10019590m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 8.0e-06 56.6 157 28.0


User provided reference genes

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