Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 4.9e-140 501.1 253 100.0
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 5.1e-81 305.1 254 63.8
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 9.7e-80 300.8 200 78.5
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 4.2e-75 285.4 253 60.1
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 1.5e-72 276.9 230 64.8
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 3.1e-70 269.2 269 58.0
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 6.5e-68 261.5 239 57.7
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 1.2e-66 257.3 257 53.3
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.2e-66 257.3 266 56.0
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 2.1e-66 256.5 259 56.8
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 3.6e-66 255.8 259 56.4
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.4e-65 253.8 269 54.3
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 4.0e-65 252.3 261 54.8
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.5e-64 250.4 257 54.5
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 2.0e-64 250.0 259 52.9
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 4.4e-64 248.8 201 64.7
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.8e-62 243.4 250 52.4
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.5e-59 233.0 264 51.9
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 3.2e-59 232.6 264 51.9
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 5.5e-59 231.9 259 48.6
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 3.0e-57 226.1 263 51.7
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 3.0e-57 226.1 266 48.9
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 2.0e-56 223.4 258 46.9
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 5.7e-56 221.9 263 49.4
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 9.8e-56 221.1 253 50.6
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.4e-54 217.2 260 51.2
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 1.4e-54 217.2 255 49.4
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 2.4e-54 216.5 267 47.2
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 5.4e-54 215.3 253 49.4
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 9.1e-54 214.5 264 46.2
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.2e-53 214.2 259 47.9
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 1.6e-53 213.8 261 45.6
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 7.7e-53 211.5 251 46.6
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 1.0e-52 211.1 268 48.5
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.3e-52 210.7 266 45.5
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 2.9e-52 209.5 263 44.5
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 1.1e-51 207.6 263 45.2
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.5e-51 207.2 256 49.6
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 2.5e-51 206.5 260 44.2
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.5e-51 206.5 256 46.1
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.3e-51 206.1 256 46.5
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 9.5e-51 204.5 249 48.6
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 3.6e-50 202.6 256 46.5
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 3.6e-50 202.6 250 47.6
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 8.0e-50 201.4 256 46.1
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 1.0e-49 201.1 249 46.6
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.4e-49 200.7 256 46.1
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 3.0e-49 199.5 250 46.4
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.2e-48 197.6 259 46.3
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 4.4e-48 195.7 235 47.7
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 9.8e-48 194.5 239 46.9
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 1.3e-47 194.1 264 43.9
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.7e-47 193.7 253 45.1
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 2.8e-47 193.0 250 45.6
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 1.1e-46 191.0 267 43.4
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.2e-45 187.6 257 45.5
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 2.0e-45 186.8 257 44.7
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 3.5e-45 186.0 262 43.5
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 5.0e-44 182.2 259 45.2
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 9.5e-43 177.9 259 44.4
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.1e-38 164.5 284 38.4
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.1e-38 164.5 268 41.4
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-38 164.1 258 40.7
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 2.4e-38 163.3 252 43.7
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 4.6e-37 159.1 277 39.7
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 7.8e-37 158.3 230 42.2
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 3.0e-36 156.4 253 41.5
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 5.0e-36 155.6 288 37.8
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 6.6e-36 155.2 252 40.5
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 2.5e-35 153.3 270 39.6
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 4.3e-35 152.5 219 43.8
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 7.3e-35 151.8 263 38.0
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.1e-33 147.9 214 44.4
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 4.4e-32 142.5 288 34.7
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.9e-31 139.0 267 36.0
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.9e-31 139.0 256 37.1
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 3.2e-30 136.3 303 36.3
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 3.5e-29 132.9 268 37.7
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 3.0e-28 129.8 263 34.2
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 1.1e-27 127.9 113 58.4
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 3.1e-25 119.8 316 32.3
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 1.2e-24 117.9 249 33.3
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.3e-20 104.4 85 56.5
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 6.6e-20 102.1 95 54.7
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.9e-19 100.5 83 53.0
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 1.9e-19 100.5 83 54.2
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 9.5e-19 98.2 83 51.8
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 9.5e-19 98.2 182 35.7
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 1.2e-18 97.8 83 51.8
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.2e-18 97.8 83 51.8
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 1.2e-18 97.8 83 51.8
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.2e-18 97.8 83 51.8
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.2e-18 97.8 83 51.8
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 1.2e-18 97.8 83 51.8
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 2.1e-18 97.1 83 51.8
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 1.8e-17 94.0 231 32.0
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 4.0e-17 92.8 102 52.9
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 5.2e-17 92.4 245 30.2
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 6.8e-17 92.0 80 50.0
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 6.4e-15 85.5 78 50.0
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.5e-11 74.3 76 44.7
FAN14G2589 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.2e-09 65.9 170 34.1
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 4.4e-08 62.8 72 44.4
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 6.4e-07 58.9 65 46.2
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 6.4e-07 58.9 65 46.2
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 7.1e-06 55.5 87 39.1


User provided reference genes

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