Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 1.2e-83 313.2 156 100.0
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 9.6e-46 187.2 117 81.2
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 4.9e-42 174.9 164 57.9
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 2.4e-36 156.0 109 72.5
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 6.9e-36 154.5 136 61.8
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 1.9e-33 146.4 106 65.1
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 1.9e-33 146.4 119 66.4
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 5.5e-33 144.8 116 66.4
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 7.9e-32 141.0 106 62.3
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 1.0e-31 140.6 116 62.9
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.4e-31 140.2 149 56.4
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 8.8e-31 137.5 107 65.4
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 2.5e-30 136.0 118 60.2
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 2.5e-30 136.0 88 75.0
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 3.3e-30 135.6 113 64.6
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 4.8e-29 131.7 96 66.7
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 6.3e-29 131.3 110 63.6
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 8.2e-29 131.0 116 61.2
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 4.1e-28 128.6 105 62.9
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 4.1e-28 128.6 85 70.6
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.9e-28 127.9 115 58.3
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 6.9e-28 127.9 114 58.8
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 6.9e-28 127.9 116 58.6
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 6.9e-28 127.9 103 62.1
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 1.2e-27 127.1 107 65.4
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 1.2e-27 127.1 87 69.0
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 1.5e-27 126.7 84 70.2
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 1.5e-27 126.7 111 60.4
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 4.5e-27 125.2 111 57.7
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 4.5e-27 125.2 112 58.9
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 4.5e-27 125.2 119 56.3
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 7.7e-27 124.4 111 55.0
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 7.7e-27 124.4 111 61.3
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.3e-26 123.6 105 60.0
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.7e-26 123.2 104 66.3
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 1.7e-26 123.2 111 60.4
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 2.9e-26 122.5 93 67.7
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 2.9e-26 122.5 93 62.4
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 5.0e-26 121.7 73 76.7
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 5.0e-26 121.7 111 54.1
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 6.5e-26 121.3 97 61.9
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 6.5e-26 121.3 103 62.1
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 6.5e-26 121.3 111 53.2
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 6.5e-26 121.3 85 68.2
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 8.5e-26 120.9 102 58.8
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 2.5e-25 119.4 151 43.0
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 3.2e-25 119.0 103 59.2
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 7.2e-25 117.9 110 61.8
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 7.2e-25 117.9 112 60.7
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 9.4e-25 117.5 119 57.1
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 9.4e-25 117.5 109 58.7
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 4.7e-24 115.2 90 63.3
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 4.7e-24 115.2 109 58.7
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 7.9e-24 114.4 102 55.9
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 1.4e-23 113.6 97 57.7
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 1.8e-23 113.2 97 59.8
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 2.3e-23 112.8 91 60.4
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 6.7e-23 111.3 88 61.4
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 1.1e-22 110.5 74 67.6
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 2.0e-22 109.8 105 56.2
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 4.4e-22 108.6 109 56.0
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 4.4e-22 108.6 109 56.0
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 9.7e-22 107.5 86 62.8
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 1.7e-21 106.7 80 65.0
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 2.8e-21 105.9 73 67.1
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 3.7e-21 105.5 118 50.0
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 4.8e-21 105.1 96 57.3
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 4.8e-21 105.1 96 57.3
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 6.3e-21 104.8 106 53.8
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 8.2e-21 104.4 82 63.4
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 1.1e-20 104.0 86 58.1
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 2.4e-20 102.8 125 50.4
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.1e-20 102.4 73 65.8
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 7.0e-20 101.3 106 52.8
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 7.0e-20 101.3 91 58.2
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 9.1e-20 100.9 125 48.0
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.2e-19 100.5 91 58.2
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 1.5e-19 100.1 100 53.0
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 2.0e-19 99.8 128 45.3
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 2.0e-19 99.8 100 54.0
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 2.0e-19 99.8 124 46.8
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 2.6e-19 99.4 83 57.8
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 3.5e-19 99.0 83 62.7
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 4.5e-19 98.6 100 53.0
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 7.7e-19 97.8 83 56.6
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 2.2e-18 96.3 73 61.6
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 2.2e-18 96.3 79 62.0
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 2.9e-18 95.9 97 49.5
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 5.0e-18 95.1 83 56.6
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 2.5e-17 92.8 72 61.1
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 5.5e-17 91.7 80 55.0
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 7.2e-17 91.3 94 48.9
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 1.2e-16 90.5 84 57.1
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.6e-16 90.1 102 51.0
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 3.6e-16 89.0 83 57.8
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 3.6e-16 89.0 83 57.8
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 3.9e-15 85.5 105 48.6
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 2.4e-12 76.3 103 41.7
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 7.0e-12 74.7 81 49.4
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 7.0e-12 74.7 109 41.3
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.6e-11 73.6 95 45.3
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 5.9e-11 71.6 109 40.4
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 5.9e-11 71.6 109 40.4
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 1.7e-10 70.1 72 52.8
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 1.5e-09 67.0 90 46.7
Pp3c19_3200 Physcomitrium patens HOM05D006370 ORTHO05D008324 7.2e-09 64.7 115 35.7
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 9.4e-09 64.3 83 39.8
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.0e-08 61.2 46 67.4
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.2e-06 57.4 65 40.0
Pp3c6_3990 Physcomitrium patens HOM05D001298 ORTHO05D001110 2.0e-06 56.6 74 41.9


User provided reference genes

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