Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24987 Davidia involucrata HOM05D000009 ORTHO05D000008 3.0e-93 345.5 224 100.0
Dinv01264 Davidia involucrata HOM05D000009 ORTHO05D016233 1.4e-66 256.9 156 95.5
Dinv01265 Davidia involucrata HOM05D000009 ORTHO05D000008 2.1e-46 189.9 197 67.5
Dinv12471 Davidia involucrata HOM05D000009 ORTHO05D000008 1.2e-44 184.1 157 66.2
Dinv26589 Davidia involucrata HOM05D000009 ORTHO05D000008 1.1e-42 177.6 158 63.9
Dinv12468 Davidia involucrata HOM05D000009 ORTHO05D000008 7.6e-36 154.8 156 54.5
Dinv12469 Davidia involucrata HOM05D000009 ORTHO05D000008 7.6e-36 154.8 156 54.5
Dinv24990 Davidia involucrata HOM05D000009 ORTHO05D000008 1.3e-32 144.1 147 68.0
Dinv24988 Davidia involucrata HOM05D000009 ORTHO05D000008 4.3e-31 139.0 157 62.4
Dinv06310 Davidia involucrata HOM05D000009 ORTHO05D003343 1.2e-28 131.0 160 61.2
Dinv20751 Davidia involucrata HOM05D000009 ORTHO05D000008 3.2e-26 122.9 158 55.7
Dinv24994 Davidia involucrata HOM05D000009 ORTHO05D000008 9.3e-26 121.3 158 56.3
Dinv20763 Davidia involucrata HOM05D000009 ORTHO05D000008 7.9e-25 118.2 160 51.2
Hma1.2p1_1755F.1_g300960 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.3e-23 112.8 172 44.8
Hma1.2p1_1168F.1_g263060 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.3e-22 108.6 109 56.9
Hma1.2p1_2078F.1_g313380 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.9e-20 102.1 167 45.5
Hma1.2p1_1514F.1_g288120 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.9e-19 99.8 135 48.1
Hma1.2p1_1041F.1_g251000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.8e-19 99.4 145 46.2
Hma1.2p1_1168F.1_g263070 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.5e-19 98.2 132 48.5
Hma1.2p1_0465F.1_g158360 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.2e-18 96.3 107 50.5
Hma1.2p1_0973F.1_g243030 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.2e-18 96.3 118 47.5
Hma1.2p1_1755F.1_g300990 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.8e-16 90.5 136 44.1
TWI09G0612 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 2.3e-16 90.1 124 44.4
QL07p001053 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-16 89.7 127 41.7
Hma1.2p1_1250F.1_g270280 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.5e-15 87.4 164 39.0
QL07p001098 Quercus lobata HOM05D000009 ORTHO05D000008 2.5e-15 86.7 127 41.7
Dinv02315 Davidia involucrata HOM05D000009 ORTHO05D000008 3.3e-15 86.3 156 37.8
Dinv12470 Davidia involucrata HOM05D000009 ORTHO05D000008 3.3e-15 86.3 156 46.8
Dinv07010 Davidia involucrata HOM05D000009 ORTHO05D000008 9.7e-15 84.7 76 60.5
QL02p093078 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-14 83.2 125 40.0
QL04p051713 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-14 82.0 157 38.2
TWI32G1271 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 6.3e-14 82.0 155 36.8
Dinv06997 Davidia involucrata HOM05D000009 ORTHO05D000008 8.2e-14 81.6 157 37.6
Manes.09G019701 Manihot esculenta HOM05D000009 ORTHO05D000008 8.2e-14 81.6 123 43.1
Hma1.2p1_1755F.1_g300950 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.1e-13 81.3 136 42.6
TWI38G1899 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.1e-13 81.3 124 40.3
Hma1.2p1_0924F.1_g237240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-13 80.9 120 44.2
TWI81G1048 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.4e-13 80.9 127 40.2
Manes.09G019801 Manihot esculenta HOM05D000009 ORTHO05D000008 1.8e-13 80.5 124 41.9
Hma1.2p1_1168F.1_g263080 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.1e-13 79.7 114 45.6
Hma1.2p1_1250F.1_g270300 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.1e-13 79.7 130 43.1
QL07p001209 Quercus lobata HOM05D000009 ORTHO05D000008 3.1e-13 79.7 127 38.6
Manes.09G019900 Manihot esculenta HOM05D000009 ORTHO05D000008 5.3e-13 79.0 123 43.1
Lj9C284T0 Lonicera japonica HOM05D000009 ORTHO05D000008 6.9e-13 78.6 130 37.7
Hma1.2p1_1168F.1_g263100 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.0e-13 78.2 134 42.5
Lj9A286T38 Lonicera japonica HOM05D000009 ORTHO05D000008 9.0e-13 78.2 123 39.8
Dinv07008 Davidia involucrata HOM05D000009 ORTHO05D016233 1.2e-12 77.8 125 41.6
Lj9P283T22 Lonicera japonica HOM05D000009 ORTHO05D000008 1.5e-12 77.4 129 39.5
Ciclev10004287m.g Citrus clementina HOM05D000009 ORTHO05D000008 2.0e-12 77.0 127 40.2
Duzib177G1012 Durio zibethinus HOM05D000009 ORTHO05D000008 2.6e-12 76.6 160 31.2
Lj9C292G2 Lonicera japonica HOM05D000009 ORTHO05D000008 2.6e-12 76.6 130 36.2
TWI32G0243 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 4.5e-12 75.9 127 39.4
Lj9C287G5 Lonicera japonica HOM05D000009 ORTHO05D000008 5.9e-12 75.5 130 36.2
Gohir.A04G021100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.0e-11 74.7 126 38.1
Manes.09G025904 Manihot esculenta HOM05D000009 ORTHO05D000008 1.0e-11 74.7 123 36.6
QL07p001235 Quercus lobata HOM05D000009 ORTHO05D000008 1.7e-11 73.9 125 40.0
Duzib177G1052 Durio zibethinus HOM05D000009 ORTHO05D000008 2.9e-11 73.2 123 35.8
QL07p001317 Quercus lobata HOM05D000009 ORTHO05D000008 2.9e-11 73.2 123 37.4
TWI38G1842 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 5.0e-11 72.4 125 37.6
QL07p000998 Quercus lobata HOM05D000009 ORTHO05D000008 6.5e-11 72.0 125 35.2
QL07p001449 Quercus lobata HOM05D000009 ORTHO05D000008 6.5e-11 72.0 127 39.4
AUR62008725 Chenopodium quinoa HOM05D000009 ORTHO05D000008 8.5e-11 71.6 127 33.9
Manes.09G025861 Manihot esculenta HOM05D000009 ORTHO05D000008 8.5e-11 71.6 121 36.4
vmacro07813 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 8.5e-11 71.6 117 40.2
EL10As8g23894 Beta vulgaris HOM05D000009 ORTHO05D000008 1.1e-10 71.2 125 33.6
Ciclev10006925m.g Citrus clementina HOM05D000009 ORTHO05D000008 1.1e-10 71.2 122 38.5
Gohir.A13G197400 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.1e-10 71.2 128 37.5
TWI09G0242 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.1e-10 71.2 124 37.1
Manes.09G025646 Manihot esculenta HOM05D000009 ORTHO05D000008 1.4e-10 70.9 121 37.2
RcHm_v2.0_Chr5g0009011 Rosa chinensis HOM05D000009 ORTHO05D000008 1.4e-10 70.9 137 35.8
Atru.chr1.3983 Acer truncatum HOM05D000009 ORTHO05D000008 2.5e-10 70.1 127 36.2
QL04p021333 Quercus lobata HOM05D003977 ORTHO05D004536 2.5e-10 70.1 96 40.6
CSS0038611 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 3.2e-10 69.7 118 39.0
QL07p001183 Quercus lobata HOM05D000009 ORTHO05D000008 3.2e-10 69.7 124 38.7
QL07p001350 Quercus lobata HOM05D000009 ORTHO05D000008 3.2e-10 69.7 125 38.4
Lj9P288T16 Lonicera japonica HOM05D000009 ORTHO05D000008 4.2e-10 69.3 123 36.6
QL07p001030 Quercus lobata HOM05D000009 ORTHO05D000008 5.5e-10 68.9 127 37.8
QL04p021406 Quercus lobata HOM05D000009 ORTHO05D000008 7.2e-10 68.6 96 39.6
QL07p029312 Quercus lobata HOM05D000009 ORTHO05D000008 7.2e-10 68.6 96 39.6
QL10p040100 Quercus lobata HOM05D000009 ORTHO05D000008 7.2e-10 68.6 124 34.7
QL93p0049_0253 Quercus lobata HOM05D000009 ORTHO05D012661 7.2e-10 68.6 96 39.6
QL06p053433 Quercus lobata HOM05D000009 ORTHO05D000008 9.4e-10 68.2 123 36.6
Dinv23960 Davidia involucrata HOM05D000009 ORTHO05D016233 1.2e-09 67.8 127 38.6
Hma1.2p1_0924F.1_g237210 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.2e-09 67.8 112 40.2
Manes.09G024872 Manihot esculenta HOM05D000009 ORTHO05D000008 1.6e-09 67.4 123 36.6
COL.COLO4_36046 Corchorus olitorius HOM05D000009 ORTHO05D000008 2.1e-09 67.0 142 33.1
Eucgr.B01184 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.1e-09 67.0 111 36.9
QL04p003342 Quercus lobata HOM05D000009 ORTHO05D000008 2.1e-09 67.0 113 40.7
Eucgr.B01120 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.7e-09 66.6 100 41.0
Eucgr.B01252 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.7e-09 66.6 121 37.2
Lj9C293G5 Lonicera japonica HOM05D000009 ORTHO05D000008 2.7e-09 66.6 69 50.7
Phvul.001G134100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.7e-09 66.6 127 33.1
Ciclev10004284m.g Citrus clementina HOM05D000009 ORTHO05D000008 3.6e-09 66.2 122 37.7
Manes.12G091600 Manihot esculenta HOM05D000009 ORTHO05D000008 3.6e-09 66.2 128 35.9
Eucgr.K02012 Eucalyptus grandis HOM05D000009 ORTHO05D000008 4.6e-09 65.9 121 40.5
QL07p029461 Quercus lobata HOM05D000009 ORTHO05D000008 4.6e-09 65.9 96 38.5
QL07p029551 Quercus lobata HOM05D000009 ORTHO05D000008 4.6e-09 65.9 96 38.5
AUR62007263 Chenopodium quinoa HOM05D000009 ORTHO05D000008 6.1e-09 65.5 81 42.0
Eucgr.B02975 Eucalyptus grandis HOM05D000009 ORTHO05D000008 6.1e-09 65.5 116 34.5
Eucgr.L02301 Eucalyptus grandis HOM05D000009 ORTHO05D000008 6.1e-09 65.5 108 38.9
Atru.chr1.3962 Acer truncatum HOM05D000009 ORTHO05D000008 7.9e-09 65.1 123 36.6
Cpa.g.sc92.43 Carica papaya HOM05D000009 ORTHO05D000008 1.0e-08 64.7 127 37.0
Eucgr.B01164 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.0e-08 64.7 121 36.4
Eucgr.K01715 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.0e-08 64.7 121 40.5
Glyma.19G135600 Glycine max HOM05D000009 ORTHO05D000008 1.0e-08 64.7 122 35.2
Hma1.2p1_1755F.1_g301000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.0e-08 64.7 59 59.3
VMungo1383G2883 Vigna mungo HOM05D000009 ORTHO05D000008 1.4e-08 64.3 124 34.7
Eucgr.K02016 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.3e-08 63.5 121 39.7
Glyma.19G139950 Glycine max HOM05D000009 ORTHO05D000008 2.3e-08 63.5 126 34.1
PGSC0003DMG400006785 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.0e-08 63.2 122 37.7
Medtr5g076840 Medicago truncatula HOM05D000009 ORTHO05D000008 5.1e-08 62.4 124 34.7
QL04p001321 Quercus lobata HOM05D000009 ORTHO05D000008 5.1e-08 62.4 113 38.1
Medtr7g078640 Medicago truncatula HOM05D000009 ORTHO05D000008 6.7e-08 62.0 126 33.3
Sed0014648 Sechium edule HOM05D000009 ORTHO05D025101 6.7e-08 62.0 119 35.3
Thecc.05G153000 Theobroma cacao HOM05D000009 ORTHO05D000008 6.7e-08 62.0 76 46.1
QL04p001460 Quercus lobata HOM05D000009 ORTHO05D000008 8.8e-08 61.6 97 40.2
MD14G1072100 Malus domestica HOM05D000009 ORTHO05D000008 1.5e-07 60.8 127 35.4
Medtr7g078300 Medicago truncatula HOM05D000009 ORTHO05D000008 1.5e-07 60.8 126 33.3
Phvul.001G134000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.5e-07 60.8 124 36.3
AUR62015711 Chenopodium quinoa HOM05D000009 ORTHO05D000008 2.0e-07 60.5 127 32.3
Gohir.A13G197850 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.0e-07 60.5 84 41.7
Phvul.001G132701 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.0e-07 60.5 125 36.8
Phvul.001G132800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.0e-07 60.5 125 36.8
Phvul.001G132864 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.0e-07 60.5 125 36.8
CiPaw.13G156300 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.6e-07 60.1 116 36.2
Manes.09G022780 Manihot esculenta HOM05D000009 ORTHO05D000008 2.6e-07 60.1 120 35.0
Manes.09G022840 Manihot esculenta HOM05D000009 ORTHO05D000008 2.6e-07 60.1 120 35.0
Atru.chr1.3975 Acer truncatum HOM05D000009 ORTHO05D000008 3.3e-07 59.7 128 32.8
AUR62026102 Chenopodium quinoa HOM05D000009 ORTHO05D000008 3.3e-07 59.7 124 33.1
CsaV3_6G033980 Cucumis sativus L. HOM05D000009 ORTHO05D000008 3.3e-07 59.7 106 35.8
QL04p001750 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-07 59.7 113 36.3
QL07p001290 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-07 59.7 127 35.4
QL08p004928 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-07 59.7 124 35.5
AUR62026066 Chenopodium quinoa HOM05D000009 ORTHO05D000008 4.4e-07 59.3 118 33.1
Eucgr.A02530 Eucalyptus grandis HOM05D000009 ORTHO05D000008 4.4e-07 59.3 157 42.7
AUR62020496 Chenopodium quinoa HOM05D000009 ORTHO05D000008 5.7e-07 58.9 126 32.5
Glyma.19G113450 Glycine max HOM05D000009 ORTHO05D016233 5.7e-07 58.9 124 31.5
EL10Ac4g07895 Beta vulgaris HOM05D000009 ORTHO05D000008 7.4e-07 58.5 125 33.6
Glyma.19G135400 Glycine max HOM05D000009 ORTHO05D000008 7.4e-07 58.5 124 33.1
QL04p003301 Quercus lobata HOM05D000009 ORTHO05D000008 7.4e-07 58.5 113 36.3
VMungo0720G2424 Vigna mungo HOM05D000009 ORTHO05D000008 7.4e-07 58.5 126 35.7
EL10Ac4g07889 Beta vulgaris HOM05D000009 ORTHO05D000008 9.7e-07 58.2 125 35.2
QL10p062698 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-06 57.8 113 36.3
Eucgr.H02892 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.7e-06 57.4 107 37.4
Eucgr.L02753 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.7e-06 57.4 106 34.9
Lj5C510T4 Lonicera japonica HOM05D000009 ORTHO05D000008 1.7e-06 57.4 117 36.8
PGR044G0938 Punica granatum HOM05D000009 ORTHO05D000008 1.7e-06 57.4 104 37.5
PGR109G0005 Punica granatum HOM05D000009 ORTHO05D000008 1.7e-06 57.4 104 37.5
Lj5C512T4 Lonicera japonica HOM05D000009 ORTHO05D000008 2.2e-06 57.0 121 34.7
CiPaw.10G095400 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.8e-06 56.6 127 32.3
CiPaw.13G156100 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.8e-06 56.6 107 36.4
MELO3C009806.2 Cucumis melo HOM05D000009 ORTHO05D025101 2.8e-06 56.6 121 34.7
Eucgr.B00927 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.8e-06 56.6 106 37.7
Peaxi162Scf00019g00013 Petunia axillaris HOM05D000009 ORTHO05D000008 2.8e-06 56.6 122 33.6
PGR044G1681 Punica granatum HOM05D000009 ORTHO05D000008 2.8e-06 56.6 81 45.7
PGR044G1977 Punica granatum HOM05D000009 ORTHO05D000008 3.7e-06 56.2 86 41.9
TPR.G40186 Trifolium pratense HOM05D000009 ORTHO05D000008 3.7e-06 56.2 123 30.9
TWI81G0469 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 3.7e-06 56.2 127 33.1
arahy.Tifrunner.gnm1.ann1.UJ09G5 Arachis hypogaea HOM05D000009 ORTHO05D000008 6.3e-06 55.5 126 33.3
Glyma.19G085550 Glycine max HOM05D000009 ORTHO05D000008 6.3e-06 55.5 110 34.5
Lj5C231T8 Lonicera japonica HOM05D000009 ORTHO05D000008 6.3e-06 55.5 143 29.4
Medtr1g047920 Medicago truncatula HOM05D000009 ORTHO05D000008 6.3e-06 55.5 125 32.8
QL04p000042 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-06 55.5 96 37.5
PGSC0003DMG400022699 Solanum tuberosum HOM05D000005 ORTHO05D000012 6.3e-06 55.5 127 30.7


User provided reference genes

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