Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.3e-104 381.3 192 100.0
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 4.8e-71 271.6 195 71.8
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.6e-69 265.8 196 71.9
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 4.6e-66 255.0 194 70.6
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.1e-62 243.8 199 66.3
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 1.4e-62 243.4 198 67.2
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.5e-61 240.0 204 63.2
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.9e-60 235.7 204 65.7
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 3.8e-60 235.3 212 62.3
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 3.8e-60 235.3 194 63.4
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 5.0e-60 235.0 209 62.7
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.9e-59 233.0 203 65.0
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.2e-59 231.9 221 59.3
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 4.6e-58 228.4 197 61.4
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.4e-57 226.9 195 63.1
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 2.3e-57 226.1 203 63.5
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 2.3e-57 226.1 206 59.2
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 3.0e-57 225.7 228 55.3
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.5e-56 223.4 178 65.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.5e-56 223.4 250 53.2
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 1.9e-56 223.0 195 60.5
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 1.9e-56 223.0 198 62.6
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 2.5e-56 222.6 197 61.9
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 5.7e-56 221.5 198 61.1
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 2.8e-55 219.2 190 62.6
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 4.8e-55 218.4 203 62.1
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 4.8e-55 218.4 206 56.8
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 4.8e-55 218.4 206 56.8
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 4.8e-55 218.4 197 62.9
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 2.4e-54 216.1 132 84.8
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 2.4e-54 216.1 197 57.4
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.1e-54 215.3 195 59.0
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 1.5e-53 213.4 198 61.6
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.0e-52 210.7 197 58.4
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.3e-52 210.3 195 57.4
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.7e-52 209.9 198 60.1
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 3.8e-52 208.8 198 59.6
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 3.8e-52 208.8 197 57.9
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 6.5e-52 208.0 203 56.7
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 6.5e-52 208.0 196 58.2
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 6.5e-52 208.0 209 56.9
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.4e-51 206.8 211 54.5
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.9e-51 206.5 215 55.3
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.9e-51 206.5 222 55.4
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 2.5e-51 206.1 197 58.4
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.2e-51 205.3 195 56.4
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 7.2e-51 204.5 195 56.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 9.4e-51 204.1 212 53.3
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 9.4e-51 204.1 193 58.5
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 2.7e-50 202.6 195 55.9
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 3.6e-50 202.2 193 61.1
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 7.9e-50 201.1 226 53.1
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 2.3e-49 199.5 196 58.2
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.3e-49 199.5 226 50.9
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.3e-49 199.5 195 55.9
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.0e-49 199.1 196 57.7
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.8e-49 197.6 206 56.8
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.1e-48 197.2 197 57.4
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.5e-48 196.8 206 55.8
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.3e-48 195.7 204 55.9
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 9.7e-48 194.1 204 52.9
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 3.7e-47 192.2 204 52.5
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 3.7e-47 192.2 204 52.5
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 4.8e-47 191.8 207 52.7
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 8.2e-47 191.0 208 51.0
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.1e-46 190.7 205 54.6
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.1e-46 190.7 205 53.7
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 2.4e-46 189.5 203 53.2
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 5.3e-46 188.3 144 64.6
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 7.0e-46 188.0 206 51.5
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 7.0e-46 188.0 207 55.1
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.2e-45 187.2 188 53.7
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 4.5e-45 185.3 202 55.9
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 5.9e-45 184.9 200 53.0
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-44 183.7 146 63.7
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 2.9e-44 182.6 201 51.7
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 6.5e-44 181.4 204 50.5
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 8.5e-44 181.0 206 50.5
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 8.5e-44 181.0 201 53.2
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 3.2e-43 179.1 151 59.6
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 7.2e-43 177.9 210 50.0
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 3.6e-42 175.6 192 53.1
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 6.1e-42 174.9 204 49.5
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 8.0e-42 174.5 216 48.6
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 3.9e-41 172.2 212 50.5
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.1e-40 170.6 160 59.4
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 2.0e-40 169.9 194 50.5
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 3.3e-40 169.1 199 48.7
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 5.7e-40 168.3 206 47.6
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 7.4e-40 167.9 142 61.3
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 9.7e-40 167.5 193 49.2
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 1.7e-39 166.8 207 49.8
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.2e-39 164.5 206 50.5
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 8.0e-34 147.9 115 66.1
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 5.3e-30 135.2 122 57.4
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.6e-29 133.7 194 44.3
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 6.5e-28 128.3 193 40.9
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 2.7e-26 122.9 124 52.4
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.6e-24 116.3 189 41.8
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.1e-19 100.9 118 49.2
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.8e-17 93.6 87 54.0
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.6e-16 89.7 79 59.5
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.7e-13 79.7 91 49.5
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 4.4e-08 62.4 159 27.7


User provided reference genes

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