Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 6.2e-72 275.8 471 100.0
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 1.5e-65 254.6 471 96.8
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.6e-59 233.0 471 94.5
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.6e-59 233.0 471 94.5
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 4.0e-55 219.9 471 91.7
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 2.0e-54 217.6 471 89.2
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 1.1e-52 211.8 471 89.4
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 4.2e-52 209.9 471 90.9
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 7.1e-52 209.1 471 90.9
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 7.1e-52 209.1 471 90.7
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 1.6e-51 208.0 471 91.3
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 4.6e-51 206.5 466 89.3
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 6.1e-51 206.1 471 88.5
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 6.1e-51 206.1 471 89.6
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 7.9e-51 205.7 471 89.0
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 5.1e-50 203.0 471 90.0
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 5.1e-50 203.0 471 89.6
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 2.5e-49 200.7 471 89.4
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 2.5e-49 200.7 471 89.2
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 7.4e-49 199.1 465 91.2
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 9.7e-49 198.7 470 88.5
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.3e-48 198.4 471 85.1
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.3e-48 198.4 471 85.1
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 1.1e-47 195.3 471 87.7
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 1.1e-47 195.3 470 88.9
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 6.9e-47 192.6 470 85.5
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 6.9e-47 192.6 471 87.3
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 9.0e-47 192.2 471 87.5
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 5.9e-46 189.5 471 88.3
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 7.7e-46 189.1 471 87.3
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 1.0e-45 188.7 471 88.1
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.3e-45 188.3 471 88.1
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.9e-45 187.2 471 86.2
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.9e-45 187.2 471 87.9
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 2.9e-45 187.2 471 89.2
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 1.9e-44 184.5 471 87.7
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 3.2e-44 183.7 471 87.5
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 4.6e-43 179.9 471 87.7
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 1.0e-42 178.7 471 87.9
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 1.4e-42 178.3 471 88.1
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 1.4e-42 178.3 468 86.8
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 1.4e-42 178.3 471 86.0
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 1.4e-42 178.3 471 86.8
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 1.4e-42 178.3 471 88.5
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 1.4e-42 178.3 468 87.6
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 5.1e-42 176.4 471 88.1
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 6.7e-42 176.0 479 62.6
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 6.7e-42 176.0 509 68.6
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 8.8e-42 175.6 474 86.1
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 8.8e-42 175.6 468 86.1
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 1.1e-41 175.3 471 87.9
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 1.1e-41 175.3 471 86.4
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 2.5e-41 174.1 483 86.1
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.2e-40 171.0 471 86.4
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 3.7e-40 170.2 473 80.3
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 3.7e-40 170.2 467 88.4
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 4.8e-40 169.9 471 86.2
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 6.3e-40 169.5 471 88.1
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 6.3e-40 169.5 468 83.1
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 2.4e-39 167.5 471 86.8
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 3.1e-39 167.2 473 70.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 4.1e-39 166.8 471 87.5
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 6.9e-39 166.0 95 86.3
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 1.5e-38 164.9 95 84.2
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 2.0e-38 164.5 95 84.2
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 3.4e-38 163.7 469 75.7
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 1.0e-37 162.2 471 86.2
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 3.8e-37 160.2 95 83.2
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 1.1e-36 158.7 94 81.9
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 1.1e-36 158.7 95 81.1
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.9e-36 157.9 95 80.0
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 2.5e-36 157.5 94 80.9
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 5.5e-36 156.4 471 72.2
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 5.5e-36 156.4 471 71.1
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 7.2e-36 156.0 472 82.4
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 7.2e-36 156.0 94 79.8
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 7.2e-36 156.0 94 79.8
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 7.2e-36 156.0 94 79.8
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 7.2e-36 156.0 94 79.8
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 7.2e-36 156.0 94 79.8
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 1.6e-35 154.8 94 78.7
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 2.1e-35 154.5 474 84.2
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 2.1e-35 154.5 474 84.2
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 2.1e-35 154.5 94 79.8
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 6.1e-35 152.9 94 80.9
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 6.1e-35 152.9 90 82.2
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 1.4e-34 151.8 94 77.7
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.3e-34 151.0 103 73.8
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 6.7e-34 149.4 90 80.0
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 2.0e-33 147.9 88 80.7
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 3.3e-33 147.1 89 78.7
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 3.7e-32 143.7 85 82.4
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 1.1e-31 142.1 93 73.1
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 2.6e-30 137.5 95 73.7
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 5.9e-30 136.3 521 76.6
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 1.7e-29 134.8 469 79.3
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 5.0e-29 133.3 471 84.5
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 2.3e-26 124.4 75 77.3
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 8.8e-26 122.5 75 76.0
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 8.8e-26 122.5 74 78.4
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 4.8e-24 116.7 93 60.2
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 8.2e-24 115.9 239 91.6
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 1.1e-23 115.5 471 80.9
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 3.5e-22 110.5 68 77.9
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 3.6e-19 100.5 456 81.8
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 2.3e-18 97.8 92 81.5
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.0e-17 94.7 52 88.5
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 7.5e-17 92.8 71 60.6
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 7.5e-17 92.8 61 70.5
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.8e-16 90.9 93 53.8
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.1e-15 87.0 44 90.9
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 4.1e-15 87.0 44 90.9
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 2.9e-13 80.9 84 78.6
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 9.4e-12 75.9 68 55.9
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 1.0e-10 72.4 65 58.5
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 5.2e-10 70.1 53 60.4
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 5.2e-10 70.1 53 60.4
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 2.0e-09 68.2 67 47.8
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 1.6e-06 58.5 87 63.2


User provided reference genes

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