Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 5.6e-188 661.0 385 100.0
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 6.4e-67 258.8 407 46.2
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.4e-61 241.1 404 44.8
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 5.3e-61 239.2 392 43.4
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 9.0e-61 238.4 413 42.1
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.2e-60 238.0 409 45.7
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 3.8e-59 233.0 378 46.6
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-58 231.1 378 41.5
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 5.5e-58 229.2 431 42.2
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 2.7e-57 226.9 346 43.1
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 7.9e-57 225.3 401 43.4
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.0e-56 224.9 393 45.3
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.3e-56 224.6 390 46.7
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 5.1e-56 222.6 396 46.7
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 1.1e-55 221.5 311 49.5
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.5e-55 221.1 405 44.9
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 6.2e-54 215.7 386 44.8
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 6.2e-54 215.7 337 45.4
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 1.2e-52 211.5 414 41.8
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.0e-52 210.7 378 44.2
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.6e-52 210.3 385 43.4
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.1e-50 204.9 376 43.6
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 2.5e-50 203.8 386 40.2
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 2.5e-50 203.8 386 40.2
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 4.2e-50 203.0 379 43.0
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.6e-49 201.1 385 41.6
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 2.1e-49 200.7 379 39.8
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.6e-49 199.5 350 45.4
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.8e-48 197.6 384 39.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.8e-48 197.6 350 44.3
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 3.0e-48 196.8 405 43.7
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 6.7e-48 195.7 374 41.2
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.1e-47 194.9 392 39.3
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.5e-47 194.5 265 54.3
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.9e-47 194.1 419 37.2
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 9.7e-47 191.8 413 39.0
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.3e-46 191.4 371 41.8
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 1.3e-46 191.4 319 44.5
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 1.6e-46 191.0 394 41.4
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 3.7e-46 189.9 293 46.1
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 2.4e-45 187.2 389 37.3
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 2.4e-45 187.2 423 39.7
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 4.1e-45 186.4 392 36.7
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.1e-45 186.4 382 41.6
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 6.9e-45 185.7 371 38.5
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 9.0e-45 185.3 429 36.8
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 1.2e-44 184.9 327 48.3
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.5e-44 184.5 368 38.6
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.4e-44 183.3 389 38.3
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 7.6e-44 182.2 388 39.2
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 7.6e-44 182.2 384 35.9
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.0e-43 181.8 423 38.8
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.7e-43 181.0 390 39.0
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 2.9e-43 180.3 367 41.1
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 5.0e-43 179.5 427 33.5
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 6.5e-43 179.1 326 47.9
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.1e-42 178.3 371 39.1
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 1.4e-42 177.9 377 36.6
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 1.9e-42 177.6 341 37.8
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 2.5e-42 177.2 407 36.4
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 2.5e-42 177.2 306 40.2
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 2.5e-42 177.2 423 39.2
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 4.2e-42 176.4 265 43.8
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 4.2e-42 176.4 371 41.8
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 7.2e-42 175.6 417 36.7
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 9.3e-42 175.3 390 40.8
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.7e-41 173.7 281 44.5
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 7.9e-41 172.2 338 39.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.0e-40 170.2 369 42.0
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 3.9e-40 169.9 370 40.8
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 5.1e-40 169.5 392 37.8
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 6.7e-40 169.1 389 36.5
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 5.7e-39 166.0 394 35.5
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.7e-38 164.5 384 40.6
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.7e-38 164.5 338 36.1
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 3.7e-38 163.3 325 40.9
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 4.8e-38 162.9 283 40.6
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 1.8e-37 161.0 322 38.8
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 9.1e-37 158.7 257 42.8
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 9.1e-37 158.7 389 36.2
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 5.9e-36 156.0 398 35.2
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 5.9e-36 156.0 340 40.3
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 7.7e-36 155.6 328 37.8
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 2.5e-34 150.6 335 36.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 3.6e-33 146.7 326 41.1
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 4.7e-33 146.4 403 32.5
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.8e-32 144.4 390 38.2
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 3.0e-32 143.7 390 37.7
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 9.7e-31 138.7 239 41.8
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 4.8e-30 136.3 333 36.9
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 2.4e-29 134.0 390 31.0
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 2.4e-29 134.0 380 36.8
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 5.3e-29 132.9 391 36.1
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 9.1e-29 132.1 391 36.3
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.5e-28 131.3 384 35.2
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 2.0e-28 131.0 324 39.5
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.3e-27 128.3 330 35.8
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 2.2e-27 127.5 401 35.4
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 5.0e-27 126.3 345 37.7
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 7.2e-26 122.5 319 38.9
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.6e-25 121.3 322 32.9
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 4.7e-25 119.8 374 36.1
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 6.1e-25 119.4 394 35.3
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.8e-24 117.9 390 34.1
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 5.2e-24 116.3 125 51.2
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.1e-23 115.2 403 36.5
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 2.6e-23 114.0 258 39.5
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 7.4e-23 112.5 86 61.6
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.7e-22 111.3 160 42.5
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.1e-21 107.1 122 47.5
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 1.2e-20 105.1 213 35.2
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.5e-18 98.2 288 34.4
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 7.2e-18 95.9 188 35.6
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.8e-14 84.0 278 32.0
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 7.0e-13 79.3 84 59.5
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.5e-12 77.0 48 70.8
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.5e-12 76.6 162 38.9
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.7e-11 74.7 319 30.1
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 1.5e-10 71.6 44 75.0
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 4.2e-10 70.1 118 55.1
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.2e-10 70.1 118 55.1
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 5.5e-10 69.7 60 61.7
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 2.1e-09 67.8 72 52.8
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.7e-09 67.4 273 32.2
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 7.5e-07 59.3 88 36.4
TAR624G0439 Trochodendron aralioides HOM05D005773 ORTHO05D006930 7.5e-07 59.3 103 39.8
FvH4_4g21660 Fragaria vesca HOM05D005773 ORTHO05D046089 1.3e-06 58.5 162 32.7
FAN12G0946 Fragaria x ananassa HOM05D005773 ORTHO05D046089 1.3e-06 58.5 162 32.7
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 3.7e-06 57.0 72 40.3
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 8.3e-06 55.8 72 40.3


User provided reference genes

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