Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 0.0e+00 1121.7 595 100.0
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.3e-106 391.3 609 45.6
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 5.4e-105 386.0 530 48.5
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.1e-94 351.7 622 42.4
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 2.1e-93 347.4 610 45.6
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 2.8e-93 347.1 637 42.4
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 4.7e-93 346.3 617 43.1
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.6e-85 321.2 605 40.3
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 2.8e-85 320.5 654 39.9
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.1e-84 318.5 611 40.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 4.2e-81 306.6 593 40.8
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 2.1e-80 304.3 283 61.1
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 6.0e-80 302.8 595 39.3
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 6.9e-76 289.3 409 46.9
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.5e-75 288.1 440 45.0
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 5.1e-71 273.1 597 38.0
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.5e-70 271.6 582 36.8
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.9e-70 271.2 534 42.3
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 2.5e-70 270.8 515 38.4
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 5.6e-70 269.6 587 38.3
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 3.1e-68 263.8 541 39.2
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 4.0e-68 263.5 515 38.6
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 9.0e-68 262.3 553 39.4
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.5e-67 261.5 523 40.3
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 2.0e-67 261.2 315 50.5
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 2.6e-67 260.8 497 41.6
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 5.8e-67 259.6 719 34.2
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 3.8e-66 256.9 716 33.7
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 4.2e-65 253.4 461 39.7
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 2.1e-64 251.1 523 40.3
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 2.7e-64 250.8 638 36.7
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 1.0e-63 248.8 516 37.4
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 2.3e-63 247.7 719 33.2
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 7.4e-62 242.7 650 34.0
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.3e-61 241.9 728 32.6
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.6e-61 241.5 442 42.1
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 2.4e-60 237.7 602 37.0
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 3.1e-60 237.3 687 33.3
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 9.0e-60 235.7 445 38.2
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.2e-59 235.3 688 33.1
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.5e-59 235.0 538 40.3
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.0e-59 234.6 538 37.7
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 7.6e-59 232.6 541 38.1
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 7.6e-59 232.6 522 37.2
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.0e-58 232.3 534 38.6
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.3e-58 231.9 292 50.0
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.7e-58 231.5 619 36.8
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.9e-57 228.0 680 32.2
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.5e-57 227.6 591 38.1
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 3.2e-57 227.3 623 33.9
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.1e-56 224.6 592 35.6
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 2.1e-56 224.6 604 33.8
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 7.9e-56 222.6 556 36.2
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.8e-55 221.5 198 66.7
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 1.8e-55 221.5 421 43.2
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 2.3e-55 221.1 526 35.7
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 5.1e-55 219.9 594 35.2
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 1.5e-54 218.4 524 36.3
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 1.5e-54 218.4 503 37.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.9e-54 218.0 456 39.7
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 6.3e-53 213.0 570 34.6
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 1.8e-52 211.5 527 36.1
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 3.1e-52 210.7 454 39.4
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 6.9e-52 209.5 454 39.4
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.4e-51 207.2 622 34.1
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 5.9e-51 206.5 521 35.1
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 6.5e-50 203.0 224 54.0
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 1.9e-49 201.4 352 42.3
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.3e-47 195.3 198 64.1
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.5e-46 191.8 463 38.7
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 2.5e-46 191.0 523 34.8
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 4.8e-45 186.8 479 34.4
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 5.3e-44 183.3 464 33.2
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 6.9e-44 183.0 375 39.2
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.3e-42 178.7 457 33.7
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 1.7e-42 178.3 545 33.0
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.4e-41 175.3 412 35.9
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.9e-41 174.9 472 37.1
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.7e-40 171.0 457 33.9
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 3.9e-39 167.2 439 32.6
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 6.7e-39 166.4 378 35.7
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 6.7e-39 166.4 419 34.6
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.0e-38 164.9 385 35.8
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.7e-37 161.8 212 45.8
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 2.2e-37 161.4 482 32.6
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 5.3e-36 156.8 191 49.2
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.6e-35 154.5 315 37.5
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 3.4e-35 154.1 469 32.4
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 2.1e-32 144.8 511 30.5
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 3.6e-32 144.1 636 28.3
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 7.9e-32 142.9 254 39.8
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.8e-31 141.7 468 31.4
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.5e-30 138.7 494 33.4
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 3.3e-30 137.5 332 37.0
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 4.4e-30 137.1 388 33.0
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.7e-29 135.2 520 29.8
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 8.2e-29 132.9 497 29.6
Lj7A493T43 Lonicera japonica HOM05D006718 ORTHO05D008492 1.8e-28 131.7 364 34.1
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.5e-27 127.5 208 38.9
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 4.5e-27 127.1 206 39.3
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 6.1e-24 116.7 318 34.6
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 6.1e-24 116.7 176 44.3
Migut.N01879 Erythranthe guttata HOM05D006718 ORTHO05D008492 2.3e-15 88.2 324 28.1
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 2.0e-14 85.1 272 29.4
Oeu051588.1 Olea europaea HOM05D054970 ORTHO05D049444 4.8e-13 80.5 300 29.0
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 1.1e-12 79.3 470 26.6
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 9.1e-12 76.3 275 28.0
Lsat_1_v5_gn_4_139860 Lactuca sativa HOM05D006718 ORTHO05D008492 5.9e-11 73.6 240 31.7
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 7.7e-11 73.2 111 42.3
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 4.2e-09 67.4 50 74.0
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 9.5e-09 66.2 263 28.1


User provided reference genes

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