Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24561 Davidia involucrata HOM05D005286 ORTHO05D006348 1.4e-122 443.0 218 100.0
Dinv15529 Davidia involucrata HOM05D005286 ORTHO05D006348 1.5e-116 422.9 208 100.0
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 2.0e-97 359.4 200 85.5
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 2.4e-95 352.4 200 85.0
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 2.4e-95 352.4 200 84.5
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 2.0e-94 349.4 200 84.0
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 3.5e-94 348.6 200 84.0
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 1.0e-93 347.1 200 82.0
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 1.7e-93 346.3 200 81.5
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 8.6e-93 344.0 200 82.0
Hma1.2p1_0310F.1_g121020 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.9e-92 342.8 188 86.2
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 2.5e-92 342.4 201 83.1
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 2.5e-92 342.4 200 81.0
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 4.3e-92 341.7 200 81.5
QL10p041264 Quercus lobata HOM05D005286 ORTHO05D006348 4.3e-92 341.7 199 80.9
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 5.6e-92 341.3 200 81.5
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 7.3e-92 340.9 201 81.1
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 7.3e-92 340.9 200 81.5
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.6e-91 339.7 201 81.1
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 2.1e-91 339.3 200 81.5
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 2.8e-91 339.0 201 81.1
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 2.8e-91 339.0 200 80.5
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 3.6e-91 338.6 201 82.6
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 8.1e-91 337.4 219 75.8
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 8.1e-91 337.4 200 80.0
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 1.1e-90 337.0 201 82.1
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 1.1e-90 337.0 200 81.0
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 1.1e-90 337.0 200 78.5
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 1.4e-90 336.7 200 81.0
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 1.8e-90 336.3 201 80.1
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 2.3e-90 335.9 201 80.6
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 4.0e-90 335.1 201 82.1
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 4.0e-90 335.1 200 80.0
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 5.2e-90 334.7 201 80.1
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 6.8e-90 334.3 200 80.5
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 6.8e-90 334.3 200 81.5
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 1.2e-89 333.6 200 79.5
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 2.0e-89 332.8 200 78.5
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 5.8e-89 331.3 201 78.1
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 5.8e-89 331.3 200 80.0
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 1.3e-88 330.1 200 76.5
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 1.3e-88 330.1 200 77.5
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.2e-88 329.3 201 78.1
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 2.2e-88 329.3 201 79.6
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 2.9e-88 328.9 200 79.0
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 3.7e-88 328.6 201 78.6
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 3.7e-88 328.6 200 76.0
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 4.9e-88 328.2 200 77.0
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 1.9e-87 326.2 201 77.1
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 3.2e-87 325.5 199 77.9
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 4.1e-87 325.1 201 77.1
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 5.4e-87 324.7 200 76.0
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 5.4e-87 324.7 204 73.0
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.6e-86 323.2 200 75.5
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 1.6e-86 323.2 201 78.1
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 6.0e-86 321.2 200 75.0
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 7.8e-86 320.9 200 75.0
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 1.3e-85 320.1 200 77.5
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 2.3e-85 319.3 200 75.5
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 3.0e-85 318.9 200 76.0
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 3.0e-85 318.9 200 76.5
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 3.9e-85 318.5 200 74.5
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 3.9e-85 318.5 200 74.5
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 3.9e-85 318.5 200 72.5
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 5.1e-85 318.2 200 75.5
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 5.1e-85 318.2 200 72.0
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 6.6e-85 317.8 200 74.5
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 8.6e-85 317.4 200 75.0
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 8.6e-85 317.4 200 76.5
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 8.6e-85 317.4 200 74.5
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 1.9e-84 316.2 200 74.5
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.9e-84 316.2 200 73.0
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 2.5e-84 315.8 200 74.5
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 5.6e-84 314.7 200 72.5
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 7.3e-84 314.3 200 74.0
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 9.5e-84 313.9 199 75.4
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 1.2e-83 313.5 200 73.5
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 1.2e-83 313.5 200 74.0
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 1.2e-83 313.5 200 74.5
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.2e-83 313.5 200 72.5
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 2.1e-83 312.8 200 75.5
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 2.1e-83 312.8 200 73.5
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 2.8e-83 312.4 200 73.0
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 2.8e-83 312.4 200 73.5
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 2.8e-83 312.4 200 73.5
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 2.8e-83 312.4 200 73.0
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 2.8e-83 312.4 200 72.5
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 3.6e-83 312.0 200 73.0
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 6.2e-83 311.2 200 73.5
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 1.1e-82 310.5 200 73.0
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 1.4e-82 310.1 200 72.5
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 1.4e-82 310.1 200 73.5
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.8e-82 309.7 196 74.5
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.8e-82 309.7 200 73.0
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 4.0e-82 308.5 200 73.0
DCAR_000205 Daucus carota HOM05D005286 ORTHO05D006348 1.3e-77 293.5 183 77.6
SEGI_22884 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 2.8e-75 285.8 197 68.5
SEGI_35897 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 2.8e-75 285.8 197 68.5
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 4.7e-75 285.0 200 67.5
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.8e-74 283.1 199 69.8
Cpa.g.sc37.7 Carica papaya HOM05D005286 ORTHO05D006348 1.2e-73 280.4 201 69.7
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 1.5e-73 280.0 201 68.2
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 3.4e-73 278.9 165 81.8
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 1.3e-72 276.9 179 73.7
Oeu039334.1 Olea europaea HOM05D005286 ORTHO05D006348 1.9e-71 273.1 178 77.0
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 4.3e-68 261.9 240 59.2
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 5.6e-68 261.5 200 65.5
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 2.6e-57 226.1 201 54.2
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.2e-56 223.0 163 68.7
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 1.1e-55 220.7 200 53.0
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 3.5e-54 215.7 121 86.8
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 1.4e-50 203.8 200 55.5
unitig_748.g8002 Utricularia gibba HOM05D005286 ORTHO05D006348 6.9e-50 201.4 131 70.2
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 2.6e-49 199.5 180 62.8
CBR_g8546 Chara braunii HOM05D005286 ORTHO05D006348 1.5e-44 183.7 201 44.3
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 7.6e-41 171.4 201 49.3
CDE08G1664 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 3.4e-33 146.0 94 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 1.3e-32 144.1 125 55.2
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 5.5e-31 138.7 121 56.2
CBR_g864 Chara braunii HOM05D005286 ORTHO05D006348 5.0e-16 89.0 203 27.6
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 6.3e-11 72.0 55 72.7
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 3.8e-08 62.8 40 82.5


User provided reference genes

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