Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24550 Davidia involucrata HOM05D002654 ORTHO05D002430 1.5e-71 272.7 132 100.0
Dinv16639 Davidia involucrata HOM05D002654 ORTHO05D002430 7.6e-44 180.6 138 75.4
Dinv34160 Davidia involucrata HOM05D002654 ORTHO05D002430 5.0e-27 124.8 143 58.0
CSS0017824 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 3.3e-23 112.1 148 51.4
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 3.3e-23 112.1 148 51.4
Hma1.2p1_0265F.1_g106720 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 2.4e-21 105.9 129 54.3
Oeu033362.1 Olea europaea HOM05D002654 ORTHO05D002430 1.4e-18 96.7 150 42.0
Lsat_1_v5_gn_8_53121 Lactuca sativa HOM05D002654 ORTHO05D002430 5.5e-18 94.7 141 47.5
CiPaw.06G084100 Carya illinoinensis HOM05D002654 ORTHO05D002430 1.2e-17 93.6 146 45.2
QL03p064352 Quercus lobata HOM05D002654 ORTHO05D002430 3.6e-17 92.0 143 47.6
Cfa008990 Carpinus fangiana HOM05D002654 ORTHO05D002430 4.7e-17 91.7 145 46.2
Oeu054885.1 Olea europaea HOM05D002654 ORTHO05D002430 4.7e-17 91.7 147 39.5
QL03p062934 Quercus lobata HOM05D002654 ORTHO05D002430 4.7e-17 91.7 143 47.6
HanXRQChr12g0380721 Helianthus annuus HOM05D002654 ORTHO05D002430 1.0e-16 90.5 105 57.1
Cc11_g13080 Coffea canephora HOM05D002654 ORTHO05D002430 1.8e-16 89.7 101 54.5
Manes.05G100700 Manihot esculenta HOM05D002654 ORTHO05D002430 3.0e-16 89.0 143 41.3
Lsat_1_v5_gn_4_9921 Lactuca sativa HOM05D002654 ORTHO05D002430 1.1e-15 87.0 105 56.2
TAR371G1053 Trochodendron aralioides HOM05D002654 ORTHO05D002430 2.0e-15 86.3 149 45.0
CAN.G58.27 Capsicum annuum HOM05D002654 ORTHO05D002430 4.4e-15 85.1 144 43.1
Actinidia19874 Actinidia chinensis HOM05D002654 ORTHO05D002430 7.4e-15 84.3 146 41.1
ECA234G4854 Erigeron canadensis HOM05D000087 ORTHO05D000439 7.4e-15 84.3 105 55.2
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 9.7e-15 84.0 149 42.3
MSTRG.7806 Avicennia marina HOM05D002654 ORTHO05D002430 1.3e-14 83.6 148 42.6
ECA233G3156 Erigeron canadensis HOM05D002654 ORTHO05D002430 1.3e-14 83.6 110 49.1
GSVIVG01019998001 Vitis vinifera HOM05D002654 ORTHO05D002430 1.7e-14 83.2 114 54.4
Rhsim12G0063400 Rhododendron simsii HOM05D002654 ORTHO05D002430 2.2e-14 82.8 147 42.9
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 8.2e-14 80.9 151 42.4
Oeu054883.1 Olea europaea HOM05D002654 ORTHO05D002430 1.1e-13 80.5 92 52.2
Migut.L01302 Erythranthe guttata HOM05D002654 ORTHO05D002430 1.4e-13 80.1 129 47.3
Peaxi162Scf00541g00022 Petunia axillaris HOM05D002654 ORTHO05D002430 7.0e-13 77.8 150 40.7
Duzib268G0299 Durio zibethinus HOM05D002654 ORTHO05D002430 9.1e-13 77.4 102 54.9
PGSC0003DMG400031263 Solanum tuberosum HOM05D002654 ORTHO05D002430 9.1e-13 77.4 143 42.0
Duzib251G0139 Durio zibethinus HOM05D002654 ORTHO05D002430 2.0e-12 76.3 108 51.9
Peaxi162Scf00036g00182 Petunia axillaris HOM05D002654 ORTHO05D002430 2.0e-12 76.3 150 40.7
Nn4g23142 Nelumbo nucifera HOM05D002654 ORTHO05D002430 2.6e-12 75.9 154 38.3
Manes.01G186300 Manihot esculenta HOM05D002654 ORTHO05D002430 5.9e-12 74.7 144 36.1
Glyma.02G106800 Glycine max HOM05D002654 ORTHO05D002430 7.7e-12 74.3 106 48.1
Nn3g17221 Nelumbo nucifera HOM05D002654 ORTHO05D002430 7.7e-12 74.3 104 49.0
Hma1.2p1_0795F.1_g218740 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 1.0e-11 73.9 146 43.2
VMungo1215G1652 Vigna mungo HOM05D002654 ORTHO05D002430 1.0e-11 73.9 105 48.6
Ciclev10031315m.g Citrus clementina HOM05D002654 ORTHO05D002430 1.7e-11 73.2 102 51.0
Phvul.002G086000 Phaseolus vulgaris HOM05D002654 ORTHO05D002430 1.7e-11 73.2 105 48.6
Sopen05g003360 Solanum pennellii HOM05D002654 ORTHO05D002430 2.2e-11 72.8 146 39.7
DCAR_024160 Daucus carota HOM05D002654 ORTHO05D002430 5.0e-11 71.6 151 37.7
Peaxi162Scf00823g00217 Petunia axillaris HOM05D002654 ORTHO05D002430 8.5e-11 70.9 150 39.3
Solyc05g007480.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 1.9e-10 69.7 102 48.0
Nitab4.5_0000703g0220 Nicotiana tabacum HOM05D002654 ORTHO05D002430 2.5e-10 69.3 138 42.8
Eucgr.G02509 Eucalyptus grandis HOM05D002654 ORTHO05D002430 4.2e-10 68.6 110 50.9
Glyma.01G046600 Glycine max HOM05D002654 ORTHO05D002430 5.5e-10 68.2 105 45.7
MD16G1073600 Malus domestica HOM05D002654 ORTHO05D002430 5.5e-10 68.2 149 38.3
Gorai.005G141100 Gossypium raimondii HOM05D002654 ORTHO05D002430 7.2e-10 67.8 137 38.7
Thecc.02G347200 Theobroma cacao HOM05D002654 ORTHO05D002430 7.2e-10 67.8 108 49.1
RcHm_v2.0_Chr4g0439931 Rosa chinensis HOM05D002654 ORTHO05D002430 9.4e-10 67.4 146 40.4
Gohir.A03G098250 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.2e-09 67.0 137 38.7
Gohir.A12G105550 Gossypium hirsutum HOM05D002654 ORTHO05D002430 1.2e-09 67.0 137 38.7
Lalb_Chr10g0098231 Lupinus albus HOM05D002654 ORTHO05D002430 1.2e-09 67.0 113 40.7
FvH4_4g31450 Fragaria vesca HOM05D002654 ORTHO05D002430 1.6e-09 66.6 100 52.0
FAN07G1505 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.6e-09 66.6 100 52.0
FAN22G0634 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.6e-09 66.6 100 52.0
ClCG05G024340 Citrullus lanatus HOM05D002654 ORTHO05D002430 2.1e-09 66.2 84 54.8
Dinv19955 Davidia involucrata HOM05D000087 ORTHO05D000439 2.1e-09 66.2 107 46.7
vmacro01254 Vaccinium macrocarpon HOM05D002654 ORTHO05D002430 2.1e-09 66.2 177 33.9
CiPaw.12G013900 Carya illinoinensis HOM05D002654 ORTHO05D002430 2.7e-09 65.9 108 42.6
FAN17G2513 Fragaria x ananassa HOM05D002654 ORTHO05D002430 2.7e-09 65.9 104 50.0
COL.COLO4_23006 Corchorus olitorius HOM05D002654 ORTHO05D002430 3.6e-09 65.5 111 45.9
Gohir.D02G125400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 3.6e-09 65.5 114 44.7
Gohir.D13G074166 Gossypium hirsutum HOM05D002654 ORTHO05D002430 4.7e-09 65.1 98 52.0
Gorai.013G084800 Gossypium raimondii HOM05D002654 ORTHO05D002430 4.7e-09 65.1 98 52.0
Gohir.A13G074101 Gossypium hirsutum HOM05D002654 ORTHO05D002430 6.1e-09 64.7 104 50.0
PGR119G1217 Punica granatum HOM05D002654 ORTHO05D002430 6.1e-09 64.7 104 47.1
CANSAT64G2692 Cannabis sativa HOM05D002654 ORTHO05D002430 8.0e-09 64.3 92 48.9
GSVIVG01008021001 Vitis vinifera HOM05D002654 ORTHO05D002430 8.0e-09 64.3 102 45.1
Cpa.g.sc128.17 Carica papaya HOM05D002654 ORTHO05D002430 1.4e-08 63.5 102 46.1
TWI18G0518 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 1.4e-08 63.5 107 44.9
Nitab4.5_0007501g0020 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.8e-08 63.2 104 46.2
Eucgr.B00480 Eucalyptus grandis HOM05D002654 ORTHO05D002430 2.3e-08 62.8 116 39.7
QL10p016685 Quercus lobata HOM05D002654 ORTHO05D002430 2.3e-08 62.8 106 43.4
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 5.2e-08 61.6 107 43.9
Medtr5g040340 Medicago truncatula HOM05D002654 ORTHO05D002430 6.7e-08 61.2 104 47.1
CiPaw.11G043200 Carya illinoinensis HOM05D002654 ORTHO05D002430 1.2e-07 60.5 106 42.5
HanXRQChr08g0210511 Helianthus annuus HOM05D002654 ORTHO05D002430 1.2e-07 60.5 47 68.1
TPR.G37132 Trifolium pratense HOM05D002654 ORTHO05D002430 2.0e-07 59.7 106 47.2
MELO3C012089.2 Cucumis melo HOM05D002654 ORTHO05D002430 2.6e-07 59.3 91 50.5
HanXRQChr12g0362581 Helianthus annuus HOM05D002654 ORTHO05D002430 2.6e-07 59.3 110 42.7
PSO801G0551 Papaver somniferum HOM05D002654 ORTHO05D002430 2.6e-07 59.3 147 30.6
TAR622G1009 Trochodendron aralioides HOM05D002654 ORTHO05D002430 2.6e-07 59.3 133 41.4
VMungo0251G1966 Vigna mungo HOM05D002654 ORTHO05D002430 3.3e-07 58.9 100 47.0
arahy.Tifrunner.gnm1.ann1.YTB47M Arachis hypogaea HOM05D002654 ORTHO05D002430 4.4e-07 58.5 97 46.4
CsaV3_5G032620 Cucumis sativus L. HOM05D002654 ORTHO05D002430 5.7e-07 58.2 84 48.8
PSO339G6607 Papaver somniferum HOM05D002654 ORTHO05D002430 5.7e-07 58.2 152 28.9
ClCG04G012340 Citrullus lanatus HOM05D002654 ORTHO05D002430 7.5e-07 57.8 138 37.0
MBI02_g39064_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 9.7e-07 57.4 142 39.4
Phvul.003G049800 Phaseolus vulgaris HOM05D002654 ORTHO05D002430 9.7e-07 57.4 102 44.1
Lalb_Chr09g0329321 Lupinus albus HOM05D002654 ORTHO05D002430 1.3e-06 57.0 70 55.7
Lalb_Chr17g0340621 Lupinus albus HOM05D002654 ORTHO05D002430 1.3e-06 57.0 101 45.5
Prupe.1G273300 Prunus persica HOM05D002654 ORTHO05D002430 1.3e-06 57.0 146 35.6
Sed0007158 Sechium edule HOM05D002654 ORTHO05D002430 1.3e-06 57.0 138 37.0
ECA233G4149 Erigeron canadensis HOM05D002654 ORTHO05D002430 1.7e-06 56.6 92 46.7
Glyma.18G120000 Glycine max HOM05D002654 ORTHO05D002430 1.7e-06 56.6 107 45.8
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 1.7e-06 56.6 107 37.4
Duzib205G1664 Durio zibethinus HOM05D002654 ORTHO05D002430 2.2e-06 56.2 103 43.7
Manes.10G056666 Manihot esculenta HOM05D002654 ORTHO05D002430 2.2e-06 56.2 128 35.9
PSO017G0875 Papaver somniferum HOM05D002654 ORTHO05D002430 2.2e-06 56.2 146 30.1
COL.COLO4_24533 Corchorus olitorius HOM05D002654 ORTHO05D002430 3.7e-06 55.5 103 42.7
Ca_04788_v3 Cicer arietinum L. HOM05D002654 ORTHO05D002430 4.8e-06 55.1 102 43.1
Lsat_1_v5_gn_8_53241 Lactuca sativa HOM05D002654 ORTHO05D002430 4.8e-06 55.1 130 38.5
Ah.03g135150 Amaranthus hybridus HOM05D002654 ORTHO05D002430 6.3e-06 54.7 88 46.6
Glyma.08G300500 Glycine max HOM05D002654 ORTHO05D002430 6.3e-06 54.7 107 43.9
Peaxi162Scf00013g00213 Petunia axillaris HOM05D002654 ORTHO05D002430 6.3e-06 54.7 110 40.0
Peaxi162Scf06066g00003 Petunia axillaris HOM05D000087 ORTHO05D002430 6.3e-06 54.7 110 40.0
arahy.Tifrunner.gnm1.ann1.63G1Z6 Arachis hypogaea HOM05D002654 ORTHO05D002430 8.2e-06 54.3 114 38.6
CSS0036856 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 8.2e-06 54.3 105 42.9
Cfa018955 Carpinus fangiana HOM05D002654 ORTHO05D002430 8.2e-06 54.3 92 44.6
AUR62005769 Chenopodium quinoa HOM05D002654 ORTHO05D002430 8.2e-06 54.3 100 43.0
AUR62028788 Chenopodium quinoa HOM05D002654 ORTHO05D002430 8.2e-06 54.3 100 43.0
Ca_24217_v3 Cicer arietinum L. HOM05D002654 ORTHO05D002430 8.2e-06 54.3 96 45.8
Haze_07337 Corylus avellana HOM05D002654 ORTHO05D002430 8.2e-06 54.3 92 44.6
FvH4_5g15090 Fragaria vesca HOM05D002654 ORTHO05D002430 8.2e-06 54.3 106 43.4
FAN18G2581 Fragaria x ananassa HOM05D002654 ORTHO05D002430 8.2e-06 54.3 106 43.4


User provided reference genes

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